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The map label for this gene is spo [H]

Identifier: 148361124

GI number: 148361124

Start: 3349138

End: 3350664

Strand: Direct

Name: spo [H]

Synonym: LPC_3098

Alternate gene names: 148361124

Gene position: 3349138-3350664 (Clockwise)

Preceding gene: 148361123

Following gene: 148361127

Centisome position: 93.64

GC content: 39.29

Gene sequence:

>1527_bases
ATGAGAAAAAAGCCTTTATCAACTGGTGCAGAATGGACTTTCGAGTTAATACAGGCCTATGATCGCGAAATTGCACGCAT
CGCCAAAAGCTTTAATTTGGATACCTATCCAAACCAAATTGAAATCATTACCGCTGAACAAATGATGGATGCCTATTCTT
CGGTGGGTATGCCTATCGGTTACCACCATTGGTCTTTTGGAAAACATTTTGTTAGTGTTGAGAAAAGCTACAAAAGAGGG
CAAATGGGCTTGGCCTATGAGCTTGTAATTAATTCCAACCCTTGTATTTCTTATTTAATGGAAGAAAATACCATGGCTAT
GCAAGCCTTGGTTATCGCTCACGCATGCTATGGCCACAATTCTTTTTTTAAGAACAATTACTTATTTAAAATGTGGACTT
CTGCGGATGCTATTATTGACTATCTGGTATTCGCCAAGAAATACATCAGCGATTGTGAGGAACGCTACGGAATAGATGCG
GTAGAATCAGTGCTTGATGCTTGCCATGCCCTTATGAATTACGGGGTTGATCGGTACAAACATCCCACACCCTTATCTAT
CCAGGAAGAAAAAATTCGACAGCAAAACCGTGAAATCTACATGCAATCACAAGTTAATGAGCTATGGAGAACGATACCTT
TCAGTAAGCAAATCGATAAAAACGGACAAAAAAAACGCTTTCCAGAAGAGCCTCAGGAAAATATTCTCTATTTTATAGAA
AAAAATGCCCCTTTATTAGAGCCTTGGCAGAGAGAAATAGTGCGTATAGTAAGAAAACTGGCCCAATATTTTTATCCTCA
GGGACAAACTAAAGTGATGAATGAAGGATGGGCCTGCTTTTGGCATTATACTATTTTGCATGCTTTGTATGACGAGGGTT
TAGTGACTGATGAATTTATGCTGGAAATACTGCAAAGTCACACCAATGTCATCATGCAACCAGCCTATAATAGCCCTTAT
TACAATGGTATTAATCCATACACCCTTGGCTACCATATGATGCAAGACATCAAACGGATTTGTGAAAACCCAACGGACGA
AGACAAAAAGTGGTTTCCCTATCTCGCGAATACCGATTGGCTCACAAGCCTTGATACGGCGATGCGCAACTACAAAGATG
AAAGCTTTATCGCTCAATACCTGTCACCAAAACTTATACGAGATTTAAAACTGTTCCATATTGTTGATGACGACCGAAAC
TCCGAATTATACATCAATGCCATTCACGACGAATGGGGATATCAGCAAATCAGAGAAGCATTATCCAGACAATATAATCT
GGGTTATCTGGAACCTGATATTCAAGTCTACTCTGTCGATTTGCAAGGAGATCGTTCTTTGACTTTAAGGTACTCCCAAC
AAAACAGAGTGCCACTTGGAAGCTCAACGAATGAAGTATTAAAGCACTTACATTATTTATGGCAATTTCCAGTCATATTA
CAGGCAGTCGATGGGGAAAATAAAATCACCGAGGAATTTAGTTGCCCACCTATTACAGATAGCAAACCAAGCAATAAAGA
AATATAA

Upstream 100 bases:

>100_bases
AACAAGTAAAAGAACGTTATCCTAATTTTGCCATGGAAAATATTGATAATGTTGCCGATATTTATCCGGTATTTCGCGAA
TTATTTAAAAGGAAAACGGT

Downstream 100 bases:

>100_bases
TTTTAAAGAGGGTTATAAATAATCAATTTGACTACAAATGATACTTGTGATGTTTTGAATCTGCAATTAATTTAAACCAG
ATTCAAGACATGCCCCAAGC

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MRKKPLSTGAEWTFELIQAYDREIARIAKSFNLDTYPNQIEIITAEQMMDAYSSVGMPIGYHHWSFGKHFVSVEKSYKRG
QMGLAYELVINSNPCISYLMEENTMAMQALVIAHACYGHNSFFKNNYLFKMWTSADAIIDYLVFAKKYISDCEERYGIDA
VESVLDACHALMNYGVDRYKHPTPLSIQEEKIRQQNREIYMQSQVNELWRTIPFSKQIDKNGQKKRFPEEPQENILYFIE
KNAPLLEPWQREIVRIVRKLAQYFYPQGQTKVMNEGWACFWHYTILHALYDEGLVTDEFMLEILQSHTNVIMQPAYNSPY
YNGINPYTLGYHMMQDIKRICENPTDEDKKWFPYLANTDWLTSLDTAMRNYKDESFIAQYLSPKLIRDLKLFHIVDDDRN
SELYINAIHDEWGYQQIREALSRQYNLGYLEPDIQVYSVDLQGDRSLTLRYSQQNRVPLGSSTNEVLKHLHYLWQFPVIL
QAVDGENKITEEFSCPPITDSKPSNKEI

Sequences:

>Translated_508_residues
MRKKPLSTGAEWTFELIQAYDREIARIAKSFNLDTYPNQIEIITAEQMMDAYSSVGMPIGYHHWSFGKHFVSVEKSYKRG
QMGLAYELVINSNPCISYLMEENTMAMQALVIAHACYGHNSFFKNNYLFKMWTSADAIIDYLVFAKKYISDCEERYGIDA
VESVLDACHALMNYGVDRYKHPTPLSIQEEKIRQQNREIYMQSQVNELWRTIPFSKQIDKNGQKKRFPEEPQENILYFIE
KNAPLLEPWQREIVRIVRKLAQYFYPQGQTKVMNEGWACFWHYTILHALYDEGLVTDEFMLEILQSHTNVIMQPAYNSPY
YNGINPYTLGYHMMQDIKRICENPTDEDKKWFPYLANTDWLTSLDTAMRNYKDESFIAQYLSPKLIRDLKLFHIVDDDRN
SELYINAIHDEWGYQQIREALSRQYNLGYLEPDIQVYSVDLQGDRSLTLRYSQQNRVPLGSSTNEVLKHLHYLWQFPVIL
QAVDGENKITEEFSCPPITDSKPSNKEI
>Mature_508_residues
MRKKPLSTGAEWTFELIQAYDREIARIAKSFNLDTYPNQIEIITAEQMMDAYSSVGMPIGYHHWSFGKHFVSVEKSYKRG
QMGLAYELVINSNPCISYLMEENTMAMQALVIAHACYGHNSFFKNNYLFKMWTSADAIIDYLVFAKKYISDCEERYGIDA
VESVLDACHALMNYGVDRYKHPTPLSIQEEKIRQQNREIYMQSQVNELWRTIPFSKQIDKNGQKKRFPEEPQENILYFIE
KNAPLLEPWQREIVRIVRKLAQYFYPQGQTKVMNEGWACFWHYTILHALYDEGLVTDEFMLEILQSHTNVIMQPAYNSPY
YNGINPYTLGYHMMQDIKRICENPTDEDKKWFPYLANTDWLTSLDTAMRNYKDESFIAQYLSPKLIRDLKLFHIVDDDRN
SELYINAIHDEWGYQQIREALSRQYNLGYLEPDIQVYSVDLQGDRSLTLRYSQQNRVPLGSSTNEVLKHLHYLWQFPVIL
QAVDGENKITEEFSCPPITDSKPSNKEI

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=492, Percent_Identity=65.8536585365854, Blast_Score=711, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 59764; Mature: 59764

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKPLSTGAEWTFELIQAYDREIARIAKSFNLDTYPNQIEIITAEQMMDAYSSVGMPIG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHCCCCCC
YHHWSFGKHFVSVEKSYKRGQMGLAYELVINSNPCISYLMEENTMAMQALVIAHACYGHN
CCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCC
SFFKNNYLFKMWTSADAIIDYLVFAKKYISDCEERYGIDAVESVLDACHALMNYGVDRYK
CHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCC
HPTPLSIQEEKIRQQNREIYMQSQVNELWRTIPFSKQIDKNGQKKRFPEEPQENILYFIE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCEEEEEE
KNAPLLEPWQREIVRIVRKLAQYFYPQGQTKVMNEGWACFWHYTILHALYDEGLVTDEFM
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHHH
LEILQSHTNVIMQPAYNSPYYNGINPYTLGYHMMQDIKRICENPTDEDKKWFPYLANTDW
HHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
LTSLDTAMRNYKDESFIAQYLSPKLIRDLKLFHIVDDDRNSELYINAIHDEWGYQQIREA
HHHHHHHHHCCCCHHHHHHHHCHHHHHHHHEEEEECCCCCCEEEEEEECCCCCHHHHHHH
LSRQYNLGYLEPDIQVYSVDLQGDRSLTLRYSQQNRVPLGSSTNEVLKHLHYLWQFPVIL
HHHCCCCCEECCCCEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
QAVDGENKITEEFSCPPITDSKPSNKEI
EEECCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKKPLSTGAEWTFELIQAYDREIARIAKSFNLDTYPNQIEIITAEQMMDAYSSVGMPIG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHCCCCCC
YHHWSFGKHFVSVEKSYKRGQMGLAYELVINSNPCISYLMEENTMAMQALVIAHACYGHN
CCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCC
SFFKNNYLFKMWTSADAIIDYLVFAKKYISDCEERYGIDAVESVLDACHALMNYGVDRYK
CHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCC
HPTPLSIQEEKIRQQNREIYMQSQVNELWRTIPFSKQIDKNGQKKRFPEEPQENILYFIE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCEEEEEE
KNAPLLEPWQREIVRIVRKLAQYFYPQGQTKVMNEGWACFWHYTILHALYDEGLVTDEFM
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHHH
LEILQSHTNVIMQPAYNSPYYNGINPYTLGYHMMQDIKRICENPTDEDKKWFPYLANTDW
HHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
LTSLDTAMRNYKDESFIAQYLSPKLIRDLKLFHIVDDDRNSELYINAIHDEWGYQQIREA
HHHHHHHHHCCCCHHHHHHHHCHHHHHHHHEEEEECCCCCCEEEEEEECCCCCHHHHHHH
LSRQYNLGYLEPDIQVYSVDLQGDRSLTLRYSQQNRVPLGSSTNEVLKHLHYLWQFPVIL
HHHCCCCCEECCCCEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
QAVDGENKITEEFSCPPITDSKPSNKEI
EEECCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]