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The map label for this gene is corB [C]

Identifier: 148361076

GI number: 148361076

Start: 3291458

End: 3292723

Strand: Reverse

Name: corB [C]

Synonym: LPC_3047

Alternate gene names: 148361076

Gene position: 3292723-3291458 (Counterclockwise)

Preceding gene: 148361077

Following gene: 148361075

Centisome position: 92.07

GC content: 37.84

Gene sequence:

>1266_bases
GTGCAACTTCCTCTTTCTACTTTATTGGTTTTATTGTTTTTCCTAATTTGCCTGTCTGCTTTTTTTTCAGGTTCCGAAAT
TGGCATGATGTCTATCAATAGATATAAATTGCGACACATGGTAAAAAGCAATGATAAGCAAGCCATTCGGGTTAATTCCA
TGCTGGCTCGGCCTGATAAGCTACTAAGTGTGGTTTTAATTGGGAATACTTTGGCAAATATAGTGGCATCAACTCTCGCT
ACTTTAATCGGACAGCGGTTTTATGGGGATGCAGGGGTGGCTATAGCAACTGCCTTGTTGACCATACTGATCCTGGTTTT
TGCAGAAATGACTCCGAAAACCCTCGCTGCTATTTACCCTCAACAAGTAGCTTTTGCATCCTCATTACCGTTGAGCATTT
TACAATGGATTTTTTCTCCTTTGGTTCATTTAATCAGTTTGATTTCCAATGGTATCTTAAGATTATTTAATATATCAGTA
AAACGCATGCAAAAGGAGATGCTAACTGGTGAAGAGTTGCGATCAGTGGTTCATGAGGCGGGAGGATTAATGCCGGTAGA
GCATAAAAGTATGTTGATTAGTTTATTGGATCTGGAACAAGCAACTGTTGAAGACATCATGGTTCCCAAAGCCGATATTG
TTGGGATTGATTTGGATTTACCCTGGATAGAACTTTTAGATCAATTGGAAACAGCACAACACACAAGATTACCAATTTAT
CATGGTTCTATTGATCATTTGGTAGGGATGATCCACGTAAGAAATATTTTAAATTTAGCATTAGAAAATAAGCTGGATAT
GGACAATTTGTTAAATAGTGCTGAAGTTCCCTATTTTATTCCCGAGGCTACCCCATTAAATATACAAATCCTTAATTTCA
GGAAAATGAAAAGAAGAAGTTGTTTTGTTGTGGATGAATATGGCGATATTCTTGGGCTTGTAACTATGGAAGATATTCTT
GAAGAAATAGTAGGTGAATTCACAACAGATATCGCTGATCTGAGTCGTGATATTACACCTCAGCAAGATGGGTCGGTCAT
AGTGGATGCCAGCATAACTATTCGCCATTTAAACCGCATGATGGGCTGGAGCCTGCCTTTAATCGGTCCAAGAACCTTAA
GTGGCCTGATTATTGAGCATTTAGGATATATTCCACCCCCTGACTCTTGTCTGGTTATTGATCATTATCATATTGAAATA
TTAAGGATCAGCGACAATATGATAAGAGGTGTAAAGATGATTAAGGCTAATAAAAGAAGAAAATAG

Upstream 100 bases:

>100_bases
TTATATCTTTAGCTATAATAGCGGCATCATTTCAGCCCCTACTACAAAACAGCAAGTTCTATTGTATAATTTGTCATTCT
TAAAAGTATAAGGATATTCA

Downstream 100 bases:

>100_bases
CTCTTATAGACTCTGATTCTCAATTCGCTTCCAGCTTGTCCCTATTTTAGCTTACTCAAATATTTATGCATTGATAAAGC
GATATAATTGATTCATTTTA

Product: Mg2+ and Co2+ transporter CorB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MQLPLSTLLVLLFFLICLSAFFSGSEIGMMSINRYKLRHMVKSNDKQAIRVNSMLARPDKLLSVVLIGNTLANIVASTLA
TLIGQRFYGDAGVAIATALLTILILVFAEMTPKTLAAIYPQQVAFASSLPLSILQWIFSPLVHLISLISNGILRLFNISV
KRMQKEMLTGEELRSVVHEAGGLMPVEHKSMLISLLDLEQATVEDIMVPKADIVGIDLDLPWIELLDQLETAQHTRLPIY
HGSIDHLVGMIHVRNILNLALENKLDMDNLLNSAEVPYFIPEATPLNIQILNFRKMKRRSCFVVDEYGDILGLVTMEDIL
EEIVGEFTTDIADLSRDITPQQDGSVIVDASITIRHLNRMMGWSLPLIGPRTLSGLIIEHLGYIPPPDSCLVIDHYHIEI
LRISDNMIRGVKMIKANKRRK

Sequences:

>Translated_421_residues
MQLPLSTLLVLLFFLICLSAFFSGSEIGMMSINRYKLRHMVKSNDKQAIRVNSMLARPDKLLSVVLIGNTLANIVASTLA
TLIGQRFYGDAGVAIATALLTILILVFAEMTPKTLAAIYPQQVAFASSLPLSILQWIFSPLVHLISLISNGILRLFNISV
KRMQKEMLTGEELRSVVHEAGGLMPVEHKSMLISLLDLEQATVEDIMVPKADIVGIDLDLPWIELLDQLETAQHTRLPIY
HGSIDHLVGMIHVRNILNLALENKLDMDNLLNSAEVPYFIPEATPLNIQILNFRKMKRRSCFVVDEYGDILGLVTMEDIL
EEIVGEFTTDIADLSRDITPQQDGSVIVDASITIRHLNRMMGWSLPLIGPRTLSGLIIEHLGYIPPPDSCLVIDHYHIEI
LRISDNMIRGVKMIKANKRRK
>Mature_421_residues
MQLPLSTLLVLLFFLICLSAFFSGSEIGMMSINRYKLRHMVKSNDKQAIRVNSMLARPDKLLSVVLIGNTLANIVASTLA
TLIGQRFYGDAGVAIATALLTILILVFAEMTPKTLAAIYPQQVAFASSLPLSILQWIFSPLVHLISLISNGILRLFNISV
KRMQKEMLTGEELRSVVHEAGGLMPVEHKSMLISLLDLEQATVEDIMVPKADIVGIDLDLPWIELLDQLETAQHTRLPIY
HGSIDHLVGMIHVRNILNLALENKLDMDNLLNSAEVPYFIPEATPLNIQILNFRKMKRRSCFVVDEYGDILGLVTMEDIL
EEIVGEFTTDIADLSRDITPQQDGSVIVDASITIRHLNRMMGWSLPLIGPRTLSGLIIEHLGYIPPPDSCLVIDHYHIEI
LRISDNMIRGVKMIKANKRRK

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=359, Percent_Identity=26.1838440111421, Blast_Score=115, Evalue=7e-26,
Organism=Homo sapiens, GI40068053, Length=354, Percent_Identity=23.728813559322, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI40068055, Length=354, Percent_Identity=23.728813559322, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI94681046, Length=334, Percent_Identity=24.8502994011976, Blast_Score=74, Evalue=3e-13,
Organism=Escherichia coli, GI145693175, Length=396, Percent_Identity=47.2222222222222, Blast_Score=380, Evalue=1e-106,
Organism=Escherichia coli, GI1790664, Length=427, Percent_Identity=25.0585480093677, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI87082033, Length=239, Percent_Identity=31.3807531380753, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI1786879, Length=235, Percent_Identity=26.3829787234043, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1788119, Length=267, Percent_Identity=25.4681647940075, Blast_Score=81, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71980512, Length=355, Percent_Identity=24.7887323943662, Blast_Score=65, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6324512, Length=363, Percent_Identity=24.5179063360882, Blast_Score=79, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47086; Mature: 47086

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLPLSTLLVLLFFLICLSAFFSGSEIGMMSINRYKLRHMVKSNDKQAIRVNSMLARPDK
CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCCEEEHHHHHHCHHH
LLSVVLIGNTLANIVASTLATLIGQRFYGDAGVAIATALLTILILVFAEMTPKTLAAIYP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QQVAFASSLPLSILQWIFSPLVHLISLISNGILRLFNISVKRMQKEMLTGEELRSVVHEA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GGLMPVEHKSMLISLLDLEQATVEDIMVPKADIVGIDLDLPWIELLDQLETAQHTRLPIY
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEE
HGSIDHLVGMIHVRNILNLALENKLDMDNLLNSAEVPYFIPEATPLNIQILNFRKMKRRS
ECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEECCCCCCCEEEEECHHHHHCCC
CFVVDEYGDILGLVTMEDILEEIVGEFTTDIADLSRDITPQQDGSVIVDASITIRHLNRM
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHH
MGWSLPLIGPRTLSGLIIEHLGYIPPPDSCLVIDHYHIEILRISDNMIRGVKMIKANKRR
HCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCHHHHHHHHHHHCCCC
K
C
>Mature Secondary Structure
MQLPLSTLLVLLFFLICLSAFFSGSEIGMMSINRYKLRHMVKSNDKQAIRVNSMLARPDK
CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCCEEEHHHHHHCHHH
LLSVVLIGNTLANIVASTLATLIGQRFYGDAGVAIATALLTILILVFAEMTPKTLAAIYP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QQVAFASSLPLSILQWIFSPLVHLISLISNGILRLFNISVKRMQKEMLTGEELRSVVHEA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GGLMPVEHKSMLISLLDLEQATVEDIMVPKADIVGIDLDLPWIELLDQLETAQHTRLPIY
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEE
HGSIDHLVGMIHVRNILNLALENKLDMDNLLNSAEVPYFIPEATPLNIQILNFRKMKRRS
ECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEECCCCCCCEEEEECHHHHHCCC
CFVVDEYGDILGLVTMEDILEEIVGEFTTDIADLSRDITPQQDGSVIVDASITIRHLNRM
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHH
MGWSLPLIGPRTLSGLIIEHLGYIPPPDSCLVIDHYHIEILRISDNMIRGVKMIKANKRR
HCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCHHHHHHHHHHHCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]