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The map label for this gene is ctaA [H]

Identifier: 148360972

GI number: 148360972

Start: 502675

End: 503682

Strand: Direct

Name: ctaA [H]

Synonym: LPC_2932

Alternate gene names: 148360972

Gene position: 502675-503682 (Clockwise)

Preceding gene: 148360973

Following gene: 148360971

Centisome position: 14.06

GC content: 41.77

Gene sequence:

>1008_bases
ATGTCTAATAGTTCAATACGATTAGCAGCAACTCTTGCTGTTTTTTTGGCTTTTTTTGTCGTTATGTTAGGCGCTTATAC
TCGTTTAACTGATGCGGGCTTAGGCTGCCCGGATTGGCCAGGTTGTTATGGTCGCATGGTTCTTCCAGGAGCAGATAAAG
GTTTGCAAGAAGCTCAATCACAATATCCGGACCTTCCTATTGAATCCAAGAAAGCCTGGACCGAAATGGCTCATCGCTAT
GCGGCAGGAACGTTAGCCCTGTTGATTTTTTTCATTGCTTTCCAGGTATGGTTCAAACGTCGTCAGGATCAAGATTTGCC
TTGGCATCTTCCCTTGGCTTTATTTATGCTTGTGGTATTTCAGGCGGCATTGGGAATGTGGACTGTTACTTTAAAATTAC
TGCCTGTAGTTGTCATGGGACATTTGCTGGGAGGCATGTTAATCGTTGCCTGTTTATGCCGTTTTCGTTTGCAGATAGCC
CAGCTAAAGGGTCAAAATTTACCTGAATGGCGACCGTGGTTGCGTTTGGGAATTGTTATCATTTTGTTGCAAATTGCTTT
GGGTGGTTGGGTAAGTGCCAATTATGCAGGTATTTCGTGTATTGGTTTTCCATTATGTAACGGAACCTGGTTTCCTGAAT
TGCATTTTGCAAAAGGATTTAATTTATTTTCTACGATAGGCGCCAATTACCAAGGCGGTGTTCTCGAGAGTGAAGTTCGG
GCCAGCATTCAATTTATTCATAGAATAGGGGCTATATTGACTGCCACTTATCTACTGGCTCTGTCATTAATAATCGTATT
CAAAACGCATTCAATTTATTTAAGAGCAACTGCTGTTATCATGGCTATGTTAGTATTACTTCAATTCACTTTAGGGATAA
TGAATGTGATTCATCTATTACCGCTCAAGGTTGCGGTCGCTCATAATGGTGTAGCCGCATTATTATTAGCGGTGGCATTT
TGTTCTTTGCATTTTACACAAGATAGGGAGGTTAGCCATGCGTACTGA

Upstream 100 bases:

>100_bases
TACCTCATACTGAGCTATCAACCAGGGTGTAACCCAGGTGATATATATAAAGATTTAAAACTTTTACTCAATACAACTGA
AATTAAGAGCGGATAAATTG

Downstream 100 bases:

>100_bases
ATACGCAGCTCGACTTCCTGTGGATTGGCGTGATTACGTGGAATTGTGTAAGCCACGCGTCGTGTTGCTCATGCTACTCA
CTGTCATTGTAGGAATGTAT

Product: cytochrome c oxidase assembly protein

Products: NA

Alternate protein names: HAS; Cytochrome aa3-controlling protein [H]

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSNSSIRLAATLAVFLAFFVVMLGAYTRLTDAGLGCPDWPGCYGRMVLPGADKGLQEAQSQYPDLPIESKKAWTEMAHRY
AAGTLALLIFFIAFQVWFKRRQDQDLPWHLPLALFMLVVFQAALGMWTVTLKLLPVVVMGHLLGGMLIVACLCRFRLQIA
QLKGQNLPEWRPWLRLGIVIILLQIALGGWVSANYAGISCIGFPLCNGTWFPELHFAKGFNLFSTIGANYQGGVLESEVR
ASIQFIHRIGAILTATYLLALSLIIVFKTHSIYLRATAVIMAMLVLLQFTLGIMNVIHLLPLKVAVAHNGVAALLLAVAF
CSLHFTQDREVSHAY

Sequences:

>Translated_335_residues
MSNSSIRLAATLAVFLAFFVVMLGAYTRLTDAGLGCPDWPGCYGRMVLPGADKGLQEAQSQYPDLPIESKKAWTEMAHRY
AAGTLALLIFFIAFQVWFKRRQDQDLPWHLPLALFMLVVFQAALGMWTVTLKLLPVVVMGHLLGGMLIVACLCRFRLQIA
QLKGQNLPEWRPWLRLGIVIILLQIALGGWVSANYAGISCIGFPLCNGTWFPELHFAKGFNLFSTIGANYQGGVLESEVR
ASIQFIHRIGAILTATYLLALSLIIVFKTHSIYLRATAVIMAMLVLLQFTLGIMNVIHLLPLKVAVAHNGVAALLLAVAF
CSLHFTQDREVSHAY
>Mature_334_residues
SNSSIRLAATLAVFLAFFVVMLGAYTRLTDAGLGCPDWPGCYGRMVLPGADKGLQEAQSQYPDLPIESKKAWTEMAHRYA
AGTLALLIFFIAFQVWFKRRQDQDLPWHLPLALFMLVVFQAALGMWTVTLKLLPVVVMGHLLGGMLIVACLCRFRLQIAQ
LKGQNLPEWRPWLRLGIVIILLQIALGGWVSANYAGISCIGFPLCNGTWFPELHFAKGFNLFSTIGANYQGGVLESEVRA
SIQFIHRIGAILTATYLLALSLIIVFKTHSIYLRATAVIMAMLVLLQFTLGIMNVIHLLPLKVAVAHNGVAALLLAVAFC
SLHFTQDREVSHAY

Specific function: Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group [H]

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX15/CtaA family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003780 [H]

Pfam domain/function: PF02628 COX15-CtaA [H]

EC number: NA

Molecular weight: Translated: 37031; Mature: 36900

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSSIRLAATLAVFLAFFVVMLGAYTRLTDAGLGCPDWPGCYGRMVLPGADKGLQEAQS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHH
QYPDLPIESKKAWTEMAHRYAAGTLALLIFFIAFQVWFKRRQDQDLPWHLPLALFMLVVF
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
QAALGMWTVTLKLLPVVVMGHLLGGMLIVACLCRFRLQIAQLKGQNLPEWRPWLRLGIVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ILLQIALGGWVSANYAGISCIGFPLCNGTWFPELHFAKGFNLFSTIGANYQGGVLESEVR
HHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCHHHHHHCCCCCCCCHHHHHH
ASIQFIHRIGAILTATYLLALSLIIVFKTHSIYLRATAVIMAMLVLLQFTLGIMNVIHLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLKVAVAHNGVAALLLAVAFCSLHFTQDREVSHAY
HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SNSSIRLAATLAVFLAFFVVMLGAYTRLTDAGLGCPDWPGCYGRMVLPGADKGLQEAQS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHH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HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA