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The map label for this gene is icmO

Identifier: 148360937

GI number: 148360937

Start: 534080

End: 536431

Strand: Direct

Name: icmO

Synonym: LPC_2897

Alternate gene names: NA

Gene position: 534080-536431 (Clockwise)

Preceding gene: 148360938

Following gene: 148360936

Centisome position: 14.93

GC content: 39.12

Gene sequence:

>2352_bases
ATGATGCGGGGTATTGATTCTCGTCATGAATTAGATCCAACCCTTTTACTTAGGGATACGCGTACTTTTACGCAGCGGTT
GGCAGATTTTTTTGCAGATCCGACCAATATTTCTATTGTTCTTATTTCATTAGCAGCTGTTTCATATTATTTCTCTGAAG
CAGCAACATTTTTGTTGATTATGGGGAGCATATTTTTTCTTTATAGCTATACCCGAAAGCAAAAGTTGCCATTTCGATTG
CCTCAAATTTCGCGTGCGAAGGATTACAACGATTTGAAACCGGGTATTAATAAACCGAATATAGCTCGAGGTATTACCTT
TTTTGGTAATGACAGAAAGACCGGCGAGGAACTTTGGTTTGCTAACGATGATATGCGTACCCATGCGTTAATTTTCGGTT
CAACGGGTAGTGGTAAAACAGAAACTTTGGTTTCTCTGTCATATAATGCCCTGGTACAGGGGAGCGGGTTTATCTACGTT
GATGGTAAAGGAGATAACTCTCTGTATGCTAAAGTCTTTTCTATGGTAAGGAGCATGGGGCGTGAAGATGATTTGCTCTT
AATCAACTTCATGACTGGAGCGCGCGATATTGTCGGTCCGCAGGAAAAAAGACTTTCCAATACACTAAACCCATTCTGCC
AAGGTTCTTCCAGTATGCTAACTCAGTTGGTAGTCAGTTTGATGGGATCTTCAGGCCAATCATCTGATGGTGATATGTGG
AAGGGACGGGCTATTGCTTTCGTAGAAGCATTAATGCGTTTATTGGTGTATATGCGTGATGAAGGGGCAATTCTTCTTGA
TGCGAATACTATTCGAAATTATTTTGATTTGCAAAGACTAGAATCTATTGTAATTGATAAAGTTTTTCCCAGAGATGATC
AAGAAAGCGTCAATATTGAAACCATTCCAAAACTGGTAACTGATCCTTTAAGAAACTATTTAAATACCTTGCCTGGGTAT
AATAAAGAGAAAAAGGGGAAACAGGTATCACAAGTTTTGGAACAGCATGGCTTTATTACCATGCAGCTGGTAAGAAGTTT
CTCTTCTCTGGCAGATACTTATGGTCATATTATTCGCACCAATTTAGCAGAAGTAGATTTTAAAGATGTGGTGCTCAACA
GACGTATATTAGTGGTTTTATTACCCGCTCTGGAAAAATCACCGGATGAATTATCTAACCTCGGCAAGATTATTGTTTCA
TCATTAAAAGCTATGATGGCGGCAGGTTTAGGTGAAGAAGTAGAAGGTGATTATCGTGATGTTATTCTAAGAAAACCCAC
GAATGCCCCAACTCCTTATATGTGCATTCTTGATGAGTATGGTTATTACGCAGTACAAGGATTTGCGGTAGTGCCTGCGC
AAGCTCGTTCTCTAGGATTTTCTGCTATTTTTGCTGGACAAGACTTACCTGCATTCCAAAAAGCATCCAAAGAAGAGGCA
GCTTCCATTGGTGCAAACACAAACATTAAAATATGTATGAAACTGGAAGATCCTACCGAAACCTGGGATTTTTTCACTAA
AACAGCTGGCGAAGCTTATGTTACAAAAGTGGATTCGTTTCAAACCAAAGAAACCAGCATAGCCAACAGCTATATGGATA
CTAAAAGCTCTTCTTTTGAAAAGAGAGCTCGGGTAGACCTCCTTGATTTAAAAGAGCAAACCGAAGGTGAGGCTCATATA
TTTTTCAAATCCAAAATTGTTCGTGCTCGCATGTTTTATGCCAATCCCAAACCGGTTAAACAATTGAAAATTAACCAATT
TTTAAAAGTAGAGCCACCGCCAGATGATTATTTAATGAAGCTACAGAAACAATTGGCTTCCTTCCAGAGCATTCTTGAAA
GCGGTGACTTGAGTATCAATAAGGCAGTCGAGAACGAAGAAATCACTCTCATTAGTAAGGCATTAAAAGAATCTACTATC
GTAGAGCCAATTGAACGAGGCGTTGCTGCTTTAATTGCATTTCATGGTCAAAATGAACCCGAGCCTGTGGAGGATATTGT
AGAGGAAGAAGTTGAGGGGGCATTAACTATTTTCAGCAAACTACGAATTGACCCTAATGCTCCTCCAATATTGGTCGCTG
ACAAAGAAGTTTTCTCTGAGCCATTATTACCCATTAATGAAACACGAAATCAAATGATAACGATTGAGTGTTTGGCAGGG
GCTAAAGACAAATACGCTGGTACAGTAGCTAATGAATTAATCAAAGATTTTCAAATAGCGACTAGCTATCCTCCTGAAGA
AAGGGATGTGATTGATGTCCAAGAACTTACTGGTATTATAAGAGATTTATCAGCTAAAATTTCCGCAGAACGTGAGAAAG
CCAATAAAAAAGCTGCAGAGGAATTAACATAA

Upstream 100 bases:

>100_bases
GACGCTCTTTGGTGCCAATGATAGATGAAGCGATTAGAGCTCTGGAAATTGCAGTAAAAGAGGTGAGATTAACACCACGT
CAAATGGAGGAATTAGAGCC

Downstream 100 bases:

>100_bases
AGACTCAGTCGGCAATTGGAGGTAGCAGTGTTCCTGTGCTATTGGGTATGAAGAGAGCTCCATATGTAAGTTACTCTGAG
TTTTTTATAATCCGGGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Conjugal Transfer Protein; TrbC Conjugal Transfer Protein; TrbC-Like Protein; Conjugal Transfer Protein TrbC; IcmO-Like Type IV Secretion System Protein; TrbC Protein; Conjugal Transfer Protein TraG/TraD/DotL/TrbC/IcmO; Type IV Secretion System Protein IcmO/DotL

Number of amino acids: Translated: 783; Mature: 783

Protein sequence:

>783_residues
MMRGIDSRHELDPTLLLRDTRTFTQRLADFFADPTNISIVLISLAAVSYYFSEAATFLLIMGSIFFLYSYTRKQKLPFRL
PQISRAKDYNDLKPGINKPNIARGITFFGNDRKTGEELWFANDDMRTHALIFGSTGSGKTETLVSLSYNALVQGSGFIYV
DGKGDNSLYAKVFSMVRSMGREDDLLLINFMTGARDIVGPQEKRLSNTLNPFCQGSSSMLTQLVVSLMGSSGQSSDGDMW
KGRAIAFVEALMRLLVYMRDEGAILLDANTIRNYFDLQRLESIVIDKVFPRDDQESVNIETIPKLVTDPLRNYLNTLPGY
NKEKKGKQVSQVLEQHGFITMQLVRSFSSLADTYGHIIRTNLAEVDFKDVVLNRRILVVLLPALEKSPDELSNLGKIIVS
SLKAMMAAGLGEEVEGDYRDVILRKPTNAPTPYMCILDEYGYYAVQGFAVVPAQARSLGFSAIFAGQDLPAFQKASKEEA
ASIGANTNIKICMKLEDPTETWDFFTKTAGEAYVTKVDSFQTKETSIANSYMDTKSSSFEKRARVDLLDLKEQTEGEAHI
FFKSKIVRARMFYANPKPVKQLKINQFLKVEPPPDDYLMKLQKQLASFQSILESGDLSINKAVENEEITLISKALKESTI
VEPIERGVAALIAFHGQNEPEPVEDIVEEEVEGALTIFSKLRIDPNAPPILVADKEVFSEPLLPINETRNQMITIECLAG
AKDKYAGTVANELIKDFQIATSYPPEERDVIDVQELTGIIRDLSAKISAEREKANKKAAEELT

Sequences:

>Translated_783_residues
MMRGIDSRHELDPTLLLRDTRTFTQRLADFFADPTNISIVLISLAAVSYYFSEAATFLLIMGSIFFLYSYTRKQKLPFRL
PQISRAKDYNDLKPGINKPNIARGITFFGNDRKTGEELWFANDDMRTHALIFGSTGSGKTETLVSLSYNALVQGSGFIYV
DGKGDNSLYAKVFSMVRSMGREDDLLLINFMTGARDIVGPQEKRLSNTLNPFCQGSSSMLTQLVVSLMGSSGQSSDGDMW
KGRAIAFVEALMRLLVYMRDEGAILLDANTIRNYFDLQRLESIVIDKVFPRDDQESVNIETIPKLVTDPLRNYLNTLPGY
NKEKKGKQVSQVLEQHGFITMQLVRSFSSLADTYGHIIRTNLAEVDFKDVVLNRRILVVLLPALEKSPDELSNLGKIIVS
SLKAMMAAGLGEEVEGDYRDVILRKPTNAPTPYMCILDEYGYYAVQGFAVVPAQARSLGFSAIFAGQDLPAFQKASKEEA
ASIGANTNIKICMKLEDPTETWDFFTKTAGEAYVTKVDSFQTKETSIANSYMDTKSSSFEKRARVDLLDLKEQTEGEAHI
FFKSKIVRARMFYANPKPVKQLKINQFLKVEPPPDDYLMKLQKQLASFQSILESGDLSINKAVENEEITLISKALKESTI
VEPIERGVAALIAFHGQNEPEPVEDIVEEEVEGALTIFSKLRIDPNAPPILVADKEVFSEPLLPINETRNQMITIECLAG
AKDKYAGTVANELIKDFQIATSYPPEERDVIDVQELTGIIRDLSAKISAEREKANKKAAEELT
>Mature_783_residues
MMRGIDSRHELDPTLLLRDTRTFTQRLADFFADPTNISIVLISLAAVSYYFSEAATFLLIMGSIFFLYSYTRKQKLPFRL
PQISRAKDYNDLKPGINKPNIARGITFFGNDRKTGEELWFANDDMRTHALIFGSTGSGKTETLVSLSYNALVQGSGFIYV
DGKGDNSLYAKVFSMVRSMGREDDLLLINFMTGARDIVGPQEKRLSNTLNPFCQGSSSMLTQLVVSLMGSSGQSSDGDMW
KGRAIAFVEALMRLLVYMRDEGAILLDANTIRNYFDLQRLESIVIDKVFPRDDQESVNIETIPKLVTDPLRNYLNTLPGY
NKEKKGKQVSQVLEQHGFITMQLVRSFSSLADTYGHIIRTNLAEVDFKDVVLNRRILVVLLPALEKSPDELSNLGKIIVS
SLKAMMAAGLGEEVEGDYRDVILRKPTNAPTPYMCILDEYGYYAVQGFAVVPAQARSLGFSAIFAGQDLPAFQKASKEEA
ASIGANTNIKICMKLEDPTETWDFFTKTAGEAYVTKVDSFQTKETSIANSYMDTKSSSFEKRARVDLLDLKEQTEGEAHI
FFKSKIVRARMFYANPKPVKQLKINQFLKVEPPPDDYLMKLQKQLASFQSILESGDLSINKAVENEEITLISKALKESTI
VEPIERGVAALIAFHGQNEPEPVEDIVEEEVEGALTIFSKLRIDPNAPPILVADKEVFSEPLLPINETRNQMITIECLAG
AKDKYAGTVANELIKDFQIATSYPPEERDVIDVQELTGIIRDLSAKISAEREKANKKAAEELT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87481; Mature: 87481

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRGIDSRHELDPTLLLRDTRTFTQRLADFFADPTNISIVLISLAAVSYYFSEAATFLLI
CCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MGSIFFLYSYTRKQKLPFRLPQISRAKDYNDLKPGINKPNIARGITFFGNDRKTGEELWF
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCEEEECCCCCCCCCEEE
ANDDMRTHALIFGSTGSGKTETLVSLSYNALVQGSGFIYVDGKGDNSLYAKVFSMVRSMG
ECCCCEEEEEEEECCCCCCCEEEEEEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCC
REDDLLLINFMTGARDIVGPQEKRLSNTLNPFCQGSSSMLTQLVVSLMGSSGQSSDGDMW
CCCCEEEEEECCCCCHHCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC
KGRAIAFVEALMRLLVYMRDEGAILLDANTIRNYFDLQRLESIVIDKVFPRDDQESVNIE
CCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
TIPKLVTDPLRNYLNTLPGYNKEKKGKQVSQVLEQHGFITMQLVRSFSSLADTYGHIIRT
HHHHHHHHHHHHHHHHCCCCCCHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
NLAEVDFKDVVLNRRILVVLLPALEKSPDELSNLGKIIVSSLKAMMAAGLGEEVEGDYRD
HHHHCCHHHHHHCCCEEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
VILRKPTNAPTPYMCILDEYGYYAVQGFAVVPAQARSLGFSAIFAGQDLPAFQKASKEEA
EEEECCCCCCCCEEEEEECCCCEEEECEEEECHHHHHCCCEEEECCCCCCHHHHHCHHHH
ASIGANTNIKICMKLEDPTETWDFFTKTAGEAYVTKVDSFQTKETSIANSYMDTKSSSFE
HHCCCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHH
KRARVDLLDLKEQTEGEAHIFFKSKIVRARMFYANPKPVKQLKINQFLKVEPPPDDYLMK
HHHCCHHHHHHHCCCCCEEEEEHHHHHHHHHEECCCCCHHHHCCCCEEECCCCCHHHHHH
LQKQLASFQSILESGDLSINKAVENEEITLISKALKESTIVEPIERGVAALIAFHGQNEP
HHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EPVEDIVEEEVEGALTIFSKLRIDPNAPPILVADKEVFSEPLLPINETRNQMITIECLAG
CHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECHHHHHCCCCCCCCCCCCEEEEEEECC
AKDKYAGTVANELIKDFQIATSYPPEERDVIDVQELTGIIRDLSAKISAEREKANKKAAE
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELT
HCC
>Mature Secondary Structure
MMRGIDSRHELDPTLLLRDTRTFTQRLADFFADPTNISIVLISLAAVSYYFSEAATFLLI
CCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MGSIFFLYSYTRKQKLPFRLPQISRAKDYNDLKPGINKPNIARGITFFGNDRKTGEELWF
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCEEEECCCCCCCCCEEE
ANDDMRTHALIFGSTGSGKTETLVSLSYNALVQGSGFIYVDGKGDNSLYAKVFSMVRSMG
ECCCCEEEEEEEECCCCCCCEEEEEEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCC
REDDLLLINFMTGARDIVGPQEKRLSNTLNPFCQGSSSMLTQLVVSLMGSSGQSSDGDMW
CCCCEEEEEECCCCCHHCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC
KGRAIAFVEALMRLLVYMRDEGAILLDANTIRNYFDLQRLESIVIDKVFPRDDQESVNIE
CCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
TIPKLVTDPLRNYLNTLPGYNKEKKGKQVSQVLEQHGFITMQLVRSFSSLADTYGHIIRT
HHHHHHHHHHHHHHHHCCCCCCHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
NLAEVDFKDVVLNRRILVVLLPALEKSPDELSNLGKIIVSSLKAMMAAGLGEEVEGDYRD
HHHHCCHHHHHHCCCEEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
VILRKPTNAPTPYMCILDEYGYYAVQGFAVVPAQARSLGFSAIFAGQDLPAFQKASKEEA
EEEECCCCCCCCEEEEEECCCCEEEECEEEECHHHHHCCCEEEECCCCCCHHHHHCHHHH
ASIGANTNIKICMKLEDPTETWDFFTKTAGEAYVTKVDSFQTKETSIANSYMDTKSSSFE
HHCCCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHH
KRARVDLLDLKEQTEGEAHIFFKSKIVRARMFYANPKPVKQLKINQFLKVEPPPDDYLMK
HHHCCHHHHHHHCCCCCEEEEEHHHHHHHHHEECCCCCHHHHCCCCEEECCCCCHHHHHH
LQKQLASFQSILESGDLSINKAVENEEITLISKALKESTIVEPIERGVAALIAFHGQNEP
HHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EPVEDIVEEEVEGALTIFSKLRIDPNAPPILVADKEVFSEPLLPINETRNQMITIECLAG
CHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECHHHHHCCCCCCCCCCCCEEEEEEECC
AKDKYAGTVANELIKDFQIATSYPPEERDVIDVQELTGIIRDLSAKISAEREKANKKAAE
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELT
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA