Click here to switch to the map view.

The map label for this gene is icmK

Identifier: 148360933

GI number: 148360933

Start: 538357

End: 539439

Strand: Direct

Name: icmK

Synonym: LPC_2893

Alternate gene names: NA

Gene position: 538357-539439 (Clockwise)

Preceding gene: 148360934

Following gene: 148360932

Centisome position: 15.05

GC content: 42.57

Gene sequence:

>1083_bases
ATGAAGAAATATGATCAATTATGTAAATATTGTTTGGTGATTGGTTTGACATTCAGTATGTCGTGCAGTATCTATGCGGC
TGATCAATCAGATGATGCTCAGCAAGCGTTGCAGCAACTGCGTATGCTACAGCAGAAATTATCACAAAACCCTTCCCCTG
ATGTACAGTTAGGAGCAGGTGATGGAGGTGATAATGCAGCTTCTGATTCAACGCAACAACCTAATCAATCTGGGCAGGCT
AATGCTCCGGCTGCAAATCAAACAGCAAATGCGGGCGGTGATGGGCAGATAATTAGTCAAGATGATGCCGAAGTTATTGA
TAAGAAGGCATTTAAGGATATGACACGCAACTTATATCCCTTAAATCCTGAGCAAGTAGTCAAATTAAAACAAATTTATG
AGACTTCCGAGTATGCCAAAGCTTCAACGGCAGGCACTCCACCTAAACCTACAGCGACATCACAATTTGTTAATCTGTCT
CCAGGCTCAACACCGCCGGTAATAAGATTATCACAAGGTTTTGTGTCTTCCTTAGTGTTCCTGGATTCAACAGGAGCCCC
TTGGCCTATTGCTGCATATGATTTGGGTGATCCCTCTTCGTTTAATATTCAATGGGATAAAACCAGTAATACTTTAATGA
TTCAAGCTACGAAGCTATATAACTATGGTAATTTGGCAGTAAGGTTAAGAGGATTAAATACCCCTGTAATGCTTACTCTT
ATACCCGGGCAGAAAGCCGTGGATTATCGAGTAGACTTGAGAGTTCAAGGCTATGGCCCCAACGCTAAAAGTATGCCAAC
TGAAGAAGGCATTCCCCCATCAGCGAATGATTTACTTCTTCATGTGTTAGAAGGTGTTCCTCCGCCAGGAAGCAGGCGTC
TGGTGGTTAGTGGTGGGGATGCTCGAGCTTGGTTATCTAATGAAAAAATGTATGTTAGAACGAATCTCACTATATTGTCG
CCGGGCTGGTTAGCCAGTATGACTAGCGCAGATGGAACGCATGCTTATGAAATGCAAAAATCTCCGGTTTTATTAGTGTC
TTGGCATGGAAAAGTCATGCAACTCAAGGTAGAAGGGTTATAA

Upstream 100 bases:

>100_bases
TAACAATGTTAATAACTAGAGTTTCAACGTTGAATTCGCCTAGAGGGATAGGTATTTCACAATTTGTTGTTGGACCTGCC
AGCGGTGGGGTATCCTAGTG

Downstream 100 bases:

>100_bases
GCAAATGGCGAGCAAAAAAGAAAATCTAAAGTCACTGTTTTCCAATACTCGGACTCGAGTGATTATCATTTTTACAGCAG
CTTTATTAATCATCGCGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: TraN Protein; TraN Conjugal Transfer Protein; TraN-Like Protein; Conjugal Transfer Protein; Type IV Secretion System Protein IcmK/DotH

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKKYDQLCKYCLVIGLTFSMSCSIYAADQSDDAQQALQQLRMLQQKLSQNPSPDVQLGAGDGGDNAASDSTQQPNQSGQA
NAPAANQTANAGGDGQIISQDDAEVIDKKAFKDMTRNLYPLNPEQVVKLKQIYETSEYAKASTAGTPPKPTATSQFVNLS
PGSTPPVIRLSQGFVSSLVFLDSTGAPWPIAAYDLGDPSSFNIQWDKTSNTLMIQATKLYNYGNLAVRLRGLNTPVMLTL
IPGQKAVDYRVDLRVQGYGPNAKSMPTEEGIPPSANDLLLHVLEGVPPPGSRRLVVSGGDARAWLSNEKMYVRTNLTILS
PGWLASMTSADGTHAYEMQKSPVLLVSWHGKVMQLKVEGL

Sequences:

>Translated_360_residues
MKKYDQLCKYCLVIGLTFSMSCSIYAADQSDDAQQALQQLRMLQQKLSQNPSPDVQLGAGDGGDNAASDSTQQPNQSGQA
NAPAANQTANAGGDGQIISQDDAEVIDKKAFKDMTRNLYPLNPEQVVKLKQIYETSEYAKASTAGTPPKPTATSQFVNLS
PGSTPPVIRLSQGFVSSLVFLDSTGAPWPIAAYDLGDPSSFNIQWDKTSNTLMIQATKLYNYGNLAVRLRGLNTPVMLTL
IPGQKAVDYRVDLRVQGYGPNAKSMPTEEGIPPSANDLLLHVLEGVPPPGSRRLVVSGGDARAWLSNEKMYVRTNLTILS
PGWLASMTSADGTHAYEMQKSPVLLVSWHGKVMQLKVEGL
>Mature_360_residues
MKKYDQLCKYCLVIGLTFSMSCSIYAADQSDDAQQALQQLRMLQQKLSQNPSPDVQLGAGDGGDNAASDSTQQPNQSGQA
NAPAANQTANAGGDGQIISQDDAEVIDKKAFKDMTRNLYPLNPEQVVKLKQIYETSEYAKASTAGTPPKPTATSQFVNLS
PGSTPPVIRLSQGFVSSLVFLDSTGAPWPIAAYDLGDPSSFNIQWDKTSNTLMIQATKLYNYGNLAVRLRGLNTPVMLTL
IPGQKAVDYRVDLRVQGYGPNAKSMPTEEGIPPSANDLLLHVLEGVPPPGSRRLVVSGGDARAWLSNEKMYVRTNLTILS
PGWLASMTSADGTHAYEMQKSPVLLVSWHGKVMQLKVEGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38852; Mature: 38852

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYDQLCKYCLVIGLTFSMSCSIYAADQSDDAQQALQQLRMLQQKLSQNPSPDVQLGAG
CCHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECC
DGGDNAASDSTQQPNQSGQANAPAANQTANAGGDGQIISQDDAEVIDKKAFKDMTRNLYP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCC
LNPEQVVKLKQIYETSEYAKASTAGTPPKPTATSQFVNLSPGSTPPVIRLSQGFVSSLVF
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCEEEECHHHHHEEEE
LDSTGAPWPIAAYDLGDPSSFNIQWDKTSNTLMIQATKLYNYGNLAVRLRGLNTPVMLTL
EECCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEEEECCCCEEEEE
IPGQKAVDYRVDLRVQGYGPNAKSMPTEEGIPPSANDLLLHVLEGVPPPGSRRLVVSGGD
CCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCC
ARAWLSNEKMYVRTNLTILSPGWLASMTSADGTHAYEMQKSPVLLVSWHGKVMQLKVEGL
CEEEECCCEEEEEEEEEEECCCHHEEECCCCCCEEEEECCCCEEEEEECCEEEEEEEECC
>Mature Secondary Structure
MKKYDQLCKYCLVIGLTFSMSCSIYAADQSDDAQQALQQLRMLQQKLSQNPSPDVQLGAG
CCHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECC
DGGDNAASDSTQQPNQSGQANAPAANQTANAGGDGQIISQDDAEVIDKKAFKDMTRNLYP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCC
LNPEQVVKLKQIYETSEYAKASTAGTPPKPTATSQFVNLSPGSTPPVIRLSQGFVSSLVF
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCEEEECHHHHHEEEE
LDSTGAPWPIAAYDLGDPSSFNIQWDKTSNTLMIQATKLYNYGNLAVRLRGLNTPVMLTL
EECCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEEEECCCCEEEEE
IPGQKAVDYRVDLRVQGYGPNAKSMPTEEGIPPSANDLLLHVLEGVPPPGSRRLVVSGGD
CCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCC
ARAWLSNEKMYVRTNLTILSPGWLASMTSADGTHAYEMQKSPVLLVSWHGKVMQLKVEGL
CEEEECCCEEEEEEEEEEECCCHHEEECCCCCCEEEEECCCCEEEEEECCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA