Click here to switch to the map view.

The map label for this gene is 148360930

Identifier: 148360930

GI number: 148360930

Start: 543422

End: 543763

Strand: Direct

Name: 148360930

Synonym: LPC_2890

Alternate gene names: NA

Gene position: 543422-543763 (Clockwise)

Preceding gene: 148360931

Following gene: 148360929

Centisome position: 15.19

GC content: 40.94

Gene sequence:

>342_bases
ATGGCTGATCCGACTTGTACTGGCGGCACAGTAGCATGCTGGATAGTGAGTCAAGCTAACATATTAGCTAATATAGCTAA
TCAGTTGGAACCTGTTCAAAGGCTGATTACTGGAGGCGCTTATTTGATTGGGTGTGCTTTTATATTTAAAGCAATTTATA
GTTTAAAGGTTTATGGAGAAGCCAGGACAATGATGTCGAGCAATACGAGTATGAAAGAGCCGGTGATGTATTTGATGGTA
GGTGCATTACTTATCTATTTCCCATCATTGGTTTCTTCCGTACTGCCAAACGACTTTTGGTTATTAGCAATTCCGCTGGC
TTACTCCAGGAAGTTTGAGTAG

Upstream 100 bases:

>100_bases
GGATATGGAATGGTTAAATTAATTGATTCTTTGCAAGGTCGTATTTTAACAAGTTCTGGACAAGTGATTAAGTTTAGTCA
AGAAGATAGTTGAGGCGTAT

Downstream 100 bases:

>100_bases
TGGAAGCGATCTATCTTCAGCCTTATTTGGTAGTGGCATTCTGGTAGGCAGACTTTGGTGATGATTATCCGGGTTATTGG
TCTAATTGCATTTGTAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MADPTCTGGTVACWIVSQANILANIANQLEPVQRLITGGAYLIGCAFIFKAIYSLKVYGEARTMMSSNTSMKEPVMYLMV
GALLIYFPSLVSSVLPNDFWLLAIPLAYSRKFE

Sequences:

>Translated_113_residues
MADPTCTGGTVACWIVSQANILANIANQLEPVQRLITGGAYLIGCAFIFKAIYSLKVYGEARTMMSSNTSMKEPVMYLMV
GALLIYFPSLVSSVLPNDFWLLAIPLAYSRKFE
>Mature_112_residues
ADPTCTGGTVACWIVSQANILANIANQLEPVQRLITGGAYLIGCAFIFKAIYSLKVYGEARTMMSSNTSMKEPVMYLMVG
ALLIYFPSLVSSVLPNDFWLLAIPLAYSRKFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12393; Mature: 12262

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADPTCTGGTVACWIVSQANILANIANQLEPVQRLITGGAYLIGCAFIFKAIYSLKVYGE
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ARTMMSSNTSMKEPVMYLMVGALLIYFPSLVSSVLPNDFWLLAIPLAYSRKFE
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCC
>Mature Secondary Structure 
ADPTCTGGTVACWIVSQANILANIANQLEPVQRLITGGAYLIGCAFIFKAIYSLKVYGE
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ARTMMSSNTSMKEPVMYLMVGALLIYFPSLVSSVLPNDFWLLAIPLAYSRKFE
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA