Click here to switch to the map view.

The map label for this gene is ycf24 [C]

Identifier: 148360749

GI number: 148360749

Start: 728549

End: 729997

Strand: Direct

Name: ycf24 [C]

Synonym: LPC_2698

Alternate gene names: 148360749

Gene position: 728549-729997 (Clockwise)

Preceding gene: 148360750

Following gene: 148360748

Centisome position: 20.37

GC content: 42.1

Gene sequence:

>1449_bases
GTGGCTAAAAGCAGTGAGCAACTAAATTCTCTGCTCGATAGAGAATATCAACATGGTTTTATAACCGACATAGAAGTTGA
AACTTTTCCTCCCGGATTGGATGAGGATGTCATTCGTCGTTTGTCTGCAATAAAAGGCGAACCTGAATTTTTGCTTGAGT
GGCGGTTGAAAGCATTTCGGCACTGGCTCACTATGCCTCACCCCGAATGGTCGAGTGTGCACTATCCTCCAATTGATTAT
CAGTCCGTTTCCTATTATTCCGCGCCTAAAAGTAAAAAAGACGCTCCCAAAAGTCTGGATGAAGTTGATCCGGAGTTGTT
AAAAACCTATGAGAAATTAGGTATTCCTTTACGCGAACAGGAAATGCTGGCAGGTGTTGCCGTTGATGCGGTGTTTGACA
GTGTTTCAGTTGCGACTACTTTTAAAGCGAAATTAGCTGAAAAAGGAGTAATTTTTTGCCCATTATCGGAAGCGGTACAT
CAATATCCGGACTTGGTTAAGAAATATCTGGGGTCAGTTGTTCCTTACAGGGATAATTTTTATGCTGCTTTGAACTCTGC
TGTGTTTAGTGATGGATCATTTGTTTATGTCCCTAAAGGTGTCCGATGTCCCATGGAGCTATCGACCTATTTCAGGATCA
ATGCTGCTTCTACCGGGCAATTTGAGAGAACACTTATTATTGCTGATGTTGACAGTTATGTGTCCTACCTGGAAGGGTGT
ACTGCCCCGATGCGAGATGAAAACCAGTTGCATGCCGCAGTCGTTGAATTGATTGCGTTAGATGGGGCTCAAATAAAATA
TTCAACGGTACAAAACTGGTATCCAGGTGATAAAGAAGGTAAAGGGGGGATATACAATTTTGTGACCAAACGAGGAGCTT
GTCGGGGTAAGAAATCGAAAATTTCCTGGACACAAATTGAAACAGGTTCAGCCATTACGTGGAAATACCCCAGTGTGATT
TTGCAAGGTGATGATTCTGTTGGCGAGTTTTATTCTGTTGCCTTAACCAATAATTTTCAGCAAGCTGACACAGGTACGAA
AATGATTCATTTAGGGAAAAATACCCGATCAACAATTATTTCGAAAGGGATCAGTGCCGGGCATGCGCATAATGCTTATC
GAGGATTGGTACGCATCGCACCAACAGCCACGAACGCGCGTAATTATACCCAATGCGACTCCATGTTAATGGGTAGTCAA
TGTTCAGCACATACTTTTCCTTATATAGAAGTCAAAAATCCAACGGCACAAGTAGAGCATGAGGCCACTACTTCAAAAAT
TAGTGAAGAGCAATTGTTTTATTGCCAGCAACGCGGTATCGATACAGAAGATGCGGTTTCTATGATCGTGAATGGATTTT
GTAAGCAAGTTTTAAAAGAATTACCTATGGAATTTGCGGTGGAAGCCACTAAATTACTAGGTATAAGCTTAGAAGGGGCA
GTTGGCTAA

Upstream 100 bases:

>100_bases
GAAACTGCTCTTGATAGTGTCAGTTTGGAGGCATTGGCAAAACCAACTCTTCCAACAAGGGATGTTGAGCGAGTTCGGCA
ATTAGCAAGTGGAGTAAATC

Downstream 100 bases:

>100_bases
TATGTTAAACATTAAAGAACTCAATGTTGCTGTCAATGGACAGTCTATTTTAAAAGGTATTAATCTTGAGGTTAAACCAG
GAGAGGTTCATGCGATTATG

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 481

Protein sequence:

>482_residues
MAKSSEQLNSLLDREYQHGFITDIEVETFPPGLDEDVIRRLSAIKGEPEFLLEWRLKAFRHWLTMPHPEWSSVHYPPIDY
QSVSYYSAPKSKKDAPKSLDEVDPELLKTYEKLGIPLREQEMLAGVAVDAVFDSVSVATTFKAKLAEKGVIFCPLSEAVH
QYPDLVKKYLGSVVPYRDNFYAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINAASTGQFERTLIIADVDSYVSYLEGC
TAPMRDENQLHAAVVELIALDGAQIKYSTVQNWYPGDKEGKGGIYNFVTKRGACRGKKSKISWTQIETGSAITWKYPSVI
LQGDDSVGEFYSVALTNNFQQADTGTKMIHLGKNTRSTIISKGISAGHAHNAYRGLVRIAPTATNARNYTQCDSMLMGSQ
CSAHTFPYIEVKNPTAQVEHEATTSKISEEQLFYCQQRGIDTEDAVSMIVNGFCKQVLKELPMEFAVEATKLLGISLEGA
VG

Sequences:

>Translated_482_residues
MAKSSEQLNSLLDREYQHGFITDIEVETFPPGLDEDVIRRLSAIKGEPEFLLEWRLKAFRHWLTMPHPEWSSVHYPPIDY
QSVSYYSAPKSKKDAPKSLDEVDPELLKTYEKLGIPLREQEMLAGVAVDAVFDSVSVATTFKAKLAEKGVIFCPLSEAVH
QYPDLVKKYLGSVVPYRDNFYAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINAASTGQFERTLIIADVDSYVSYLEGC
TAPMRDENQLHAAVVELIALDGAQIKYSTVQNWYPGDKEGKGGIYNFVTKRGACRGKKSKISWTQIETGSAITWKYPSVI
LQGDDSVGEFYSVALTNNFQQADTGTKMIHLGKNTRSTIISKGISAGHAHNAYRGLVRIAPTATNARNYTQCDSMLMGSQ
CSAHTFPYIEVKNPTAQVEHEATTSKISEEQLFYCQQRGIDTEDAVSMIVNGFCKQVLKELPMEFAVEATKLLGISLEGA
VG
>Mature_481_residues
AKSSEQLNSLLDREYQHGFITDIEVETFPPGLDEDVIRRLSAIKGEPEFLLEWRLKAFRHWLTMPHPEWSSVHYPPIDYQ
SVSYYSAPKSKKDAPKSLDEVDPELLKTYEKLGIPLREQEMLAGVAVDAVFDSVSVATTFKAKLAEKGVIFCPLSEAVHQ
YPDLVKKYLGSVVPYRDNFYAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINAASTGQFERTLIIADVDSYVSYLEGCT
APMRDENQLHAAVVELIALDGAQIKYSTVQNWYPGDKEGKGGIYNFVTKRGACRGKKSKISWTQIETGSAITWKYPSVIL
QGDDSVGEFYSVALTNNFQQADTGTKMIHLGKNTRSTIISKGISAGHAHNAYRGLVRIAPTATNARNYTQCDSMLMGSQC
SAHTFPYIEVKNPTAQVEHEATTSKISEEQLFYCQQRGIDTEDAVSMIVNGFCKQVLKELPMEFAVEATKLLGISLEGAV
G

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=479, Percent_Identity=63.8830897703549, Blast_Score=656, Evalue=0.0,
Organism=Escherichia coli, GI1787971, Length=156, Percent_Identity=27.5641025641026, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53583; Mature: 53452

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSSEQLNSLLDREYQHGFITDIEVETFPPGLDEDVIRRLSAIKGEPEFLLEWRLKAFR
CCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
HWLTMPHPEWSSVHYPPIDYQSVSYYSAPKSKKDAPKSLDEVDPELLKTYEKLGIPLREQ
HHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCHH
EMLAGVAVDAVFDSVSVATTFKAKLAEKGVIFCPLSEAVHQYPDLVKKYLGSVVPYRDNF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCH
YAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINAASTGQFERTLIIADVDSYVSYLEGC
HHHHHHHHCCCCCEEEECCCCCCCCEECEEEEEECCCCCCCEEEEEEEEHHHHHHHHHCC
TAPMRDENQLHAAVVELIALDGAQIKYSTVQNWYPGDKEGKGGIYNFVTKRGACRGKKSK
CCCCCCCHHHHHHHHHHHHCCCCEEEEEHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC
ISWTQIETGSAITWKYPSVILQGDDSVGEFYSVALTNNFQQADTGTKMIHLGKNTRSTII
CEEEEEECCCEEEEECCEEEEECCCCCCCEEEEEEECCCHHCCCCCEEEEECCCHHHHHH
SKGISAGHAHNAYRGLVRIAPTATNARNYTQCDSMLMGSQCSAHTFPYIEVKNPTAQVEH
HHCCCCCCCCHHHHCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHH
EATTSKISEEQLFYCQQRGIDTEDAVSMIVNGFCKQVLKELPMEFAVEATKLLGISLEGA
HHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCC
VG
CC
>Mature Secondary Structure 
AKSSEQLNSLLDREYQHGFITDIEVETFPPGLDEDVIRRLSAIKGEPEFLLEWRLKAFR
CCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
HWLTMPHPEWSSVHYPPIDYQSVSYYSAPKSKKDAPKSLDEVDPELLKTYEKLGIPLREQ
HHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCHH
EMLAGVAVDAVFDSVSVATTFKAKLAEKGVIFCPLSEAVHQYPDLVKKYLGSVVPYRDNF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCH
YAALNSAVFSDGSFVYVPKGVRCPMELSTYFRINAASTGQFERTLIIADVDSYVSYLEGC
HHHHHHHHCCCCCEEEECCCCCCCCEECEEEEEECCCCCCCEEEEEEEEHHHHHHHHHCC
TAPMRDENQLHAAVVELIALDGAQIKYSTVQNWYPGDKEGKGGIYNFVTKRGACRGKKSK
CCCCCCCHHHHHHHHHHHHCCCCEEEEEHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC
ISWTQIETGSAITWKYPSVILQGDDSVGEFYSVALTNNFQQADTGTKMIHLGKNTRSTII
CEEEEEECCCEEEEECCEEEEECCCCCCCEEEEEEECCCHHCCCCCEEEEECCCHHHHHH
SKGISAGHAHNAYRGLVRIAPTATNARNYTQCDSMLMGSQCSAHTFPYIEVKNPTAQVEH
HHCCCCCCCCHHHHCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHH
EATTSKISEEQLFYCQQRGIDTEDAVSMIVNGFCKQVLKELPMEFAVEATKLLGISLEGA
HHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCC
VG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]