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The map label for this gene is sufD [C]

Identifier: 148360747

GI number: 148360747

Start: 730748

End: 732034

Strand: Direct

Name: sufD [C]

Synonym: LPC_2696

Alternate gene names: 148360747

Gene position: 730748-732034 (Clockwise)

Preceding gene: 148360748

Following gene: 148360746

Centisome position: 20.43

GC content: 40.02

Gene sequence:

>1287_bases
ATGAGTGATATTTTGGATTATTATCAACAGCAAGCCCAATCAGGCGTATCGCAAATACCCTGGCTTGCGCAGTTGCAGTC
TAAAGCATTAACTGATTTGAAGCGCCGTGGTTTTCCCACCCGATATGATGAGGAATGGAAGTACACTCTCGTTGACTCAC
TATTACAGCAACATTTTGTACTACCTGATCCTACAGTAAAGCCTGCTCTTAAAACCGCCTTTGACGATTCACCAGTCAAA
AACCTGTTTTTAATACAGAATGGATTTATTTCCCAAGAGCAAGAATGGATTAAGAATCTGCCTGAAGGCGTGTTAATTCT
GCCTTTATCTCTTGCTTTAATACATTATGCTGATTTGGTTAAGCCTTACCTTGGAAAAATTGTAGAACAGGAGCATGGGT
TTCATTATCTAAATACAGCCATGCTCCAATGCGGAGTCTTTATTTATATCCCTGCGGGAATTTGTTTGGAAGAACCCATT
GTTTTAAAGCATATCCAGGATCAAACGAACCAGGCTATGCATTTAAGGCATCTGATCCTTATGGAAAAAGAATCTCAGGC
TACTCTGATTGAAGAATATCAAGGCGAAGAAAACATTTGCTATTTCACTAACAGTATTACTGAAGTATTTCTTGGAGCAG
GAGCAAAACTTAATCATTATAAAATTCAAAAAGAAAGTAAATCAGCTTACCATTTAGGTCATTTATCGGTTAGGCAATCT
GCCGCCAGTCAATTTTCCAGCCACTCTTTGAGTTTGGGTGGGAAGTTAGTACGCAGTGATATTAGCGTGTCCATGCAGGA
AGAACAAGCTCAATGCCTTATGAATGGAATTTACGCACCGGGGGATGGACAACACATAGATCATCATACTGTGGTTCATC
ATTTGGTGCCTAACTGTCGAAGCGATCAAGATTACAAAGGGATTTTAAAGGGACATTCCAGAGCGGTATTTAATGGCAAG
GTTATTGTAGCCAAGAATGCACAACATACTGATGCCAAGCAGCAAAATAAAAATTTACTTCTCTCCGCAAATGCTGAAAT
TGATACAAAACCGCAATTAGAGATTTTCGCTGATGACGTTTTATGTTCACATGGTGCTACGGTTGGGCAACTGGATGAAG
AGGCAATCTTTTACCTGGCAACACGCGGTATTAGCAGGGATGAAGCTTCTCATTATTTGATCCAGGCGTTTGCCAATGAT
AATTTGCGCCTTATTCCAAATCGTGATTTGGCTGATTGGATGGGTAATTTATTAACTCAACAGTTGGGGTACGCAAATGA
GTACTAA

Upstream 100 bases:

>100_bases
ATGTCTTGGCAAATGGTCGTATTATTACGTCAGGGGATAAATCTTTGGCGCTGGAACTGGAGAAAAAGGGTTATAGCTGG
CTTGAAGAAGTGGAGCAGTT

Downstream 100 bases:

>100_bases
TCCTTCCCTAATGACATCCTTTGATGTCAATAAAATCAGGAAAGATTTTCCTGTATTGCATCAGAAAATCAATGAGTATG
ATTTGGTGTATTTTGATAAC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSDILDYYQQQAQSGVSQIPWLAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALKTAFDDSPVK
NLFLIQNGFISQEQEWIKNLPEGVLILPLSLALIHYADLVKPYLGKIVEQEHGFHYLNTAMLQCGVFIYIPAGICLEEPI
VLKHIQDQTNQAMHLRHLILMEKESQATLIEEYQGEENICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQS
AASQFSSHSLSLGGKLVRSDISVSMQEEQAQCLMNGIYAPGDGQHIDHHTVVHHLVPNCRSDQDYKGILKGHSRAVFNGK
VIVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFADDVLCSHGATVGQLDEEAIFYLATRGISRDEASHYLIQAFAND
NLRLIPNRDLADWMGNLLTQQLGYANEY

Sequences:

>Translated_428_residues
MSDILDYYQQQAQSGVSQIPWLAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALKTAFDDSPVK
NLFLIQNGFISQEQEWIKNLPEGVLILPLSLALIHYADLVKPYLGKIVEQEHGFHYLNTAMLQCGVFIYIPAGICLEEPI
VLKHIQDQTNQAMHLRHLILMEKESQATLIEEYQGEENICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQS
AASQFSSHSLSLGGKLVRSDISVSMQEEQAQCLMNGIYAPGDGQHIDHHTVVHHLVPNCRSDQDYKGILKGHSRAVFNGK
VIVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFADDVLCSHGATVGQLDEEAIFYLATRGISRDEASHYLIQAFAND
NLRLIPNRDLADWMGNLLTQQLGYANEY
>Mature_427_residues
SDILDYYQQQAQSGVSQIPWLAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALKTAFDDSPVKN
LFLIQNGFISQEQEWIKNLPEGVLILPLSLALIHYADLVKPYLGKIVEQEHGFHYLNTAMLQCGVFIYIPAGICLEEPIV
LKHIQDQTNQAMHLRHLILMEKESQATLIEEYQGEENICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQSA
ASQFSSHSLSLGGKLVRSDISVSMQEEQAQCLMNGIYAPGDGQHIDHHTVVHHLVPNCRSDQDYKGILKGHSRAVFNGKV
IVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFADDVLCSHGATVGQLDEEAIFYLATRGISRDEASHYLIQAFANDN
LRLIPNRDLADWMGNLLTQQLGYANEY

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=369, Percent_Identity=31.9783197831978, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI87081955, Length=320, Percent_Identity=23.4375, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 48251; Mature: 48120

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDILDYYQQQAQSGVSQIPWLAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFV
CCHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC
LPDPTVKPALKTAFDDSPVKNLFLIQNGFISQEQEWIKNLPEGVLILPLSLALIHYADLV
CCCCCCCHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
KPYLGKIVEQEHGFHYLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQAMHLRHLIL
HHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MEKESQATLIEEYQGEENICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQS
CCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCEEEEECCCCCCEEEHHHHHHHH
AASQFSSHSLSLGGKLVRSDISVSMQEEQAQCLMNGIYAPGDGQHIDHHTVVHHLVPNCR
HHHHHHHCCHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCC
SDQDYKGILKGHSRAVFNGKVIVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFADDV
CCCCHHHHHCCCCEEEECCEEEEECCCCCCCHHHCCCCEEEEECCCCCCCCCCEEEHHHH
LCSHGATVGQLDEEAIFYLATRGISRDEASHYLIQAFANDNLRLIPNRDLADWMGNLLTQ
HHHCCCCCCCCCHHHEEEHHHCCCCCCHHHHHHHHEECCCCEEEECCCCHHHHHHHHHHH
QLGYANEY
HHCCCCCC
>Mature Secondary Structure 
SDILDYYQQQAQSGVSQIPWLAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFV
CHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC
LPDPTVKPALKTAFDDSPVKNLFLIQNGFISQEQEWIKNLPEGVLILPLSLALIHYADLV
CCCCCCCHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
KPYLGKIVEQEHGFHYLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQAMHLRHLIL
HHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MEKESQATLIEEYQGEENICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQS
CCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCEEEEECCCCCCEEEHHHHHHHH
AASQFSSHSLSLGGKLVRSDISVSMQEEQAQCLMNGIYAPGDGQHIDHHTVVHHLVPNCR
HHHHHHHCCHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCC
SDQDYKGILKGHSRAVFNGKVIVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFADDV
CCCCHHHHHCCCCEEEECCEEEEECCCCCCCHHHCCCCEEEEECCCCCCCCCCEEEHHHH
LCSHGATVGQLDEEAIFYLATRGISRDEASHYLIQAFANDNLRLIPNRDLADWMGNLLTQ
HHHCCCCCCCCCHHHEEEHHHCCCCCCHHHHHHHHEECCCCEEEECCCCHHHHHHHHHHH
QLGYANEY
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]