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The map label for this gene is yugS [H]

Identifier: 148360738

GI number: 148360738

Start: 738905

End: 740224

Strand: Direct

Name: yugS [H]

Synonym: LPC_2687

Alternate gene names: 148360738

Gene position: 738905-740224 (Clockwise)

Preceding gene: 148360743

Following gene: 148360735

Centisome position: 20.66

GC content: 36.67

Gene sequence:

>1320_bases
ATGTATAACATTCTGTTAATTTTTATAGCATTCCTGCTGGTGCTTCTCAATGCATTTTTTGTATCCGCCGAATTTGGGAT
GGTTAAACTCAGGGCTACGAGAATTCAAGCCATCAAAGAAAATTACGGGCTAAGAGGTCGCATTCTTGAGCAAGTCCATC
AAAATCTGGATGCGTATTTATCAGCATGTCAGTTAGGCATTACTCTTGCTTCGTTAGGATTGGGTTGGATTGGAGAGCCT
GCTTTTGCAGAGTTATTGGGGCCATTATTTGTTGCTTTGGGTATTTCATCGGTTCATATTGTTACTATATCTTCTTTTTT
TATTGCATTTTTTCTTATTTCTTTTCTACATATTGTAATCGGTGAGCTTATGCCCAAGTCCATTGCCATTCGGCAATCTG
AATTGATTTCAATATGGACTGCAGTCCCGTTGTATTGGTTTTACTGGATAATGTATCCTGCCATCTGGTTATTAAATACC
TGTTCCAATTTTTTTCTCAAACTGTCCGGCATGGATATAAAAAACGAATACGAAGGTTTTTATTCAAGTGAAGAACTTAA
ATTAATTTTAAGCGGGCAGCATTTGCAATCGGAATTAAAAGAGGATGAACGTGAAATTCTCGAGCATACTCTCGATTTGG
CTGAGTTAAATGTCACTGAGGTAATGCGCCCTGAAGATGAAATGATCATAATAGATATCAATGAGCCATTCGAAACGATT
AAAGATAAAATTTTAAAATATCGTTATAGTCGTTATCCTGTCTATGATTCCGGGACTAGGGAAATGATTGGTGTCATCCA
CGTTAAGGATTTATTTGCCGATTTGTTGCTCCAGAAAAATATCAATACATTAAAGCCTTATGTGCGACCAGTACTTAAAG
TCAGTCATAAATTACCTGCTATGGATTTGCTGCGTAAATTCAGAGCTGGTATGCCTCATTTTGCTTTGGTATACAAACAC
AAATCGAGTTTACTTGGATTTGTAACTCTGGATAATTTGCTCCATATCCTGATTGGGCGGATTAAAGACGAGTTTCATAA
AACACATGAAGATTGGGTAAAAAATTCGGACGGAACTATAACGACAAAAGGAGATTGCTCCCTTTATTCTCTAGAACGGG
CTCTTGATTGCGATATTACTTTATCGCCAGATGAAGAAGAACTGAATACACTATATGGACTTATTATCACGCGCCACGGA
AAATTGCCCAATGAAGGCGAAATAATTCAATTTGTTGAATTTGATGCCTTGATTGAAAAGGTACAGGATTCTTTTATAAC
CAAAATTAAAGTTTTCCCCAAGATTAAAAACCAGGAATAA

Upstream 100 bases:

>100_bases
TTTATATAAACCAAATGACCGAATTATAAATATTTTTAACGAAGAGATTGGGATTTTTCGTAAGTTCTGTGAAATTAAAT
CATAAACCGGACTATTTTTA

Downstream 100 bases:

>100_bases
TATTTGCTCCGTGGTATAAAAGGCCAACTGGAAGCCTTTTATACCGGGTTCATTTAATCCAGGGTTGACATATCGATAAC
AAATCGATATTTCACATCTC

Product: metal ion transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MYNILLIFIAFLLVLLNAFFVSAEFGMVKLRATRIQAIKENYGLRGRILEQVHQNLDAYLSACQLGITLASLGLGWIGEP
AFAELLGPLFVALGISSVHIVTISSFFIAFFLISFLHIVIGELMPKSIAIRQSELISIWTAVPLYWFYWIMYPAIWLLNT
CSNFFLKLSGMDIKNEYEGFYSSEELKLILSGQHLQSELKEDEREILEHTLDLAELNVTEVMRPEDEMIIIDINEPFETI
KDKILKYRYSRYPVYDSGTREMIGVIHVKDLFADLLLQKNINTLKPYVRPVLKVSHKLPAMDLLRKFRAGMPHFALVYKH
KSSLLGFVTLDNLLHILIGRIKDEFHKTHEDWVKNSDGTITTKGDCSLYSLERALDCDITLSPDEEELNTLYGLIITRHG
KLPNEGEIIQFVEFDALIEKVQDSFITKIKVFPKIKNQE

Sequences:

>Translated_439_residues
MYNILLIFIAFLLVLLNAFFVSAEFGMVKLRATRIQAIKENYGLRGRILEQVHQNLDAYLSACQLGITLASLGLGWIGEP
AFAELLGPLFVALGISSVHIVTISSFFIAFFLISFLHIVIGELMPKSIAIRQSELISIWTAVPLYWFYWIMYPAIWLLNT
CSNFFLKLSGMDIKNEYEGFYSSEELKLILSGQHLQSELKEDEREILEHTLDLAELNVTEVMRPEDEMIIIDINEPFETI
KDKILKYRYSRYPVYDSGTREMIGVIHVKDLFADLLLQKNINTLKPYVRPVLKVSHKLPAMDLLRKFRAGMPHFALVYKH
KSSLLGFVTLDNLLHILIGRIKDEFHKTHEDWVKNSDGTITTKGDCSLYSLERALDCDITLSPDEEELNTLYGLIITRHG
KLPNEGEIIQFVEFDALIEKVQDSFITKIKVFPKIKNQE
>Mature_439_residues
MYNILLIFIAFLLVLLNAFFVSAEFGMVKLRATRIQAIKENYGLRGRILEQVHQNLDAYLSACQLGITLASLGLGWIGEP
AFAELLGPLFVALGISSVHIVTISSFFIAFFLISFLHIVIGELMPKSIAIRQSELISIWTAVPLYWFYWIMYPAIWLLNT
CSNFFLKLSGMDIKNEYEGFYSSEELKLILSGQHLQSELKEDEREILEHTLDLAELNVTEVMRPEDEMIIIDINEPFETI
KDKILKYRYSRYPVYDSGTREMIGVIHVKDLFADLLLQKNINTLKPYVRPVLKVSHKLPAMDLLRKFRAGMPHFALVYKH
KSSLLGFVTLDNLLHILIGRIKDEFHKTHEDWVKNSDGTITTKGDCSLYSLERALDCDITLSPDEEELNTLYGLIITRHG
KLPNEGEIIQFVEFDALIEKVQDSFITKIKVFPKIKNQE

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=403, Percent_Identity=32.7543424317618, Blast_Score=224, Evalue=1e-58,
Organism=Escherichia coli, GI145693175, Length=420, Percent_Identity=23.5714285714286, Blast_Score=125, Evalue=8e-30,
Organism=Escherichia coli, GI1790664, Length=409, Percent_Identity=19.8044009779951, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI87082033, Length=279, Percent_Identity=27.2401433691756, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1786879, Length=212, Percent_Identity=25.9433962264151, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1788119, Length=237, Percent_Identity=24.4725738396624, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 50430; Mature: 50430

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNILLIFIAFLLVLLNAFFVSAEFGMVKLRATRIQAIKENYGLRGRILEQVHQNLDAYL
CHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SACQLGITLASLGLGWIGEPAFAELLGPLFVALGISSVHIVTISSFFIAFFLISFLHIVI
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GELMPKSIAIRQSELISIWTAVPLYWFYWIMYPAIWLLNTCSNFFLKLSGMDIKNEYEGF
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCC
YSSEELKLILSGQHLQSELKEDEREILEHTLDLAELNVTEVMRPEDEMIIIDINEPFETI
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEECCCHHHHH
KDKILKYRYSRYPVYDSGTREMIGVIHVKDLFADLLLQKNINTLKPYVRPVLKVSHKLPA
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCH
MDLLRKFRAGMPHFALVYKHKSSLLGFVTLDNLLHILIGRIKDEFHKTHEDWVKNSDGTI
HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
TTKGDCSLYSLERALDCDITLSPDEEELNTLYGLIITRHGKLPNEGEIIQFVEFDALIEK
EECCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHHEECCCCCCCCCEEEHHHHHHHHHH
VQDSFITKIKVFPKIKNQE
HHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MYNILLIFIAFLLVLLNAFFVSAEFGMVKLRATRIQAIKENYGLRGRILEQVHQNLDAYL
CHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SACQLGITLASLGLGWIGEPAFAELLGPLFVALGISSVHIVTISSFFIAFFLISFLHIVI
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GELMPKSIAIRQSELISIWTAVPLYWFYWIMYPAIWLLNTCSNFFLKLSGMDIKNEYEGF
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCC
YSSEELKLILSGQHLQSELKEDEREILEHTLDLAELNVTEVMRPEDEMIIIDINEPFETI
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEECCCHHHHH
KDKILKYRYSRYPVYDSGTREMIGVIHVKDLFADLLLQKNINTLKPYVRPVLKVSHKLPA
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCH
MDLLRKFRAGMPHFALVYKHKSSLLGFVTLDNLLHILIGRIKDEFHKTHEDWVKNSDGTI
HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
TTKGDCSLYSLERALDCDITLSPDEEELNTLYGLIITRHGKLPNEGEIIQFVEFDALIEK
EECCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHHEECCCCCCCCCEEEHHHHHHHHHH
VQDSFITKIKVFPKIKNQE
HHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]