Click here to switch to the map view.

The map label for this gene is ybhG [C]

Identifier: 148360688

GI number: 148360688

Start: 817654

End: 818499

Strand: Direct

Name: ybhG [C]

Synonym: LPC_2634

Alternate gene names: 148360688

Gene position: 817654-818499 (Clockwise)

Preceding gene: 148360689

Following gene: 148360687

Centisome position: 22.86

GC content: 40.9

Gene sequence:

>846_bases
ATGAGTAAAAAAGCGATAGCAATAAGTATCGTCATCGCACTTTTTTTCATCACAGCAATTTGGTTTGCGTACAGCTTTGT
TAAACAGGAAGAAAATCAAAATTGGCTTACTCTTTACGGAAATATTGATATACGTGACGTTTCATTATCCTTTCGTGTCT
CGGGGCGTATCCTGTCTATGGACGTTGATGAAGGTGCTCATGTTAAGAAGGGGCAACTACTCGCCAGGCTTGATAAAGAT
ACTTTTATAGCCAATCTGGAAATGGCGAAAGCCCAATTGAAGCAAGCCATTGCCAATCAAAAAAATGCAAGCAGAACTTA
TAAAAGACGTGAGCAATTAGTTGATGACGGGGCTGTTTCAAAAGCGCTTTTTGATGATGCCGTTGCGATGAAAGACTCGA
GTAGTGCCGAAGTTTCTGTGGCTAAAGCGAATCTTGAGAAAGCTCAAATATCATTGAACGATACGGAAATTCATGCCCCG
ACTCACGGGACGATACTGACCAGAATTCAGGAGCCAGGGGCTATTGTTAATGTCGCGGAACCAGTTTATACCCTTGCTAT
TGATAATCCGGTATGGGTAAGGACTTATATTGATGAACCTTTTTTAGGTAGAATTTATCCTGGACAGGACGCTTTGGTTT
ACACGGATTCCAATCCGGAAAAGCCCTACAAAGGTCATATTGGCTTTATTTCTCCGCAGGCAGAATTCACACCAAAAATT
GTTGAAACCACTCAATTGAGAACGGATCTTGTCTATCGTATAAGAGTCGTTATTGATCAACCGGATAATGGATTAAGGCA
AGGAATGCCTGTTACTGTGAAAATCCATTTAAAAGCGAATTCATAG

Upstream 100 bases:

>100_bases
GAAAACATTTTTAACAAAGAGATTGGAGTTTTTCATAAGTCCTGAAGAAAATATAATGCGAACAAAGGGTTAGTACGCCA
AAGAATTCATGGAGAACTAT

Downstream 100 bases:

>100_bases
TAATGAATAGTTCAAAACCACTAGTCAGTATTAATGGAGTCAGCAAATGTTTTCCTGGAAACACTGATCCGGCATTAGAT
AATGTTTCTGCAACAATTTT

Product: HlyD family transporter secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSKKAIAISIVIALFFITAIWFAYSFVKQEENQNWLTLYGNIDIRDVSLSFRVSGRILSMDVDEGAHVKKGQLLARLDKD
TFIANLEMAKAQLKQAIANQKNASRTYKRREQLVDDGAVSKALFDDAVAMKDSSSAEVSVAKANLEKAQISLNDTEIHAP
THGTILTRIQEPGAIVNVAEPVYTLAIDNPVWVRTYIDEPFLGRIYPGQDALVYTDSNPEKPYKGHIGFISPQAEFTPKI
VETTQLRTDLVYRIRVVIDQPDNGLRQGMPVTVKIHLKANS

Sequences:

>Translated_281_residues
MSKKAIAISIVIALFFITAIWFAYSFVKQEENQNWLTLYGNIDIRDVSLSFRVSGRILSMDVDEGAHVKKGQLLARLDKD
TFIANLEMAKAQLKQAIANQKNASRTYKRREQLVDDGAVSKALFDDAVAMKDSSSAEVSVAKANLEKAQISLNDTEIHAP
THGTILTRIQEPGAIVNVAEPVYTLAIDNPVWVRTYIDEPFLGRIYPGQDALVYTDSNPEKPYKGHIGFISPQAEFTPKI
VETTQLRTDLVYRIRVVIDQPDNGLRQGMPVTVKIHLKANS
>Mature_280_residues
SKKAIAISIVIALFFITAIWFAYSFVKQEENQNWLTLYGNIDIRDVSLSFRVSGRILSMDVDEGAHVKKGQLLARLDKDT
FIANLEMAKAQLKQAIANQKNASRTYKRREQLVDDGAVSKALFDDAVAMKDSSSAEVSVAKANLEKAQISLNDTEIHAPT
HGTILTRIQEPGAIVNVAEPVYTLAIDNPVWVRTYIDEPFLGRIYPGQDALVYTDSNPEKPYKGHIGFISPQAEFTPKIV
ETTQLRTDLVYRIRVVIDQPDNGLRQGMPVTVKIHLKANS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0194 family [H]

Homologues:

Organism=Escherichia coli, GI1787013, Length=304, Percent_Identity=38.1578947368421, Blast_Score=204, Evalue=5e-54,
Organism=Escherichia coli, GI1789900, Length=275, Percent_Identity=25.0909090909091, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI87081951, Length=235, Percent_Identity=30.6382978723404, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI87081796, Length=302, Percent_Identity=28.1456953642384, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI87082036, Length=132, Percent_Identity=31.0606060606061, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143
- InterPro:   IPR022936 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 31346; Mature: 31215

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKAIAISIVIALFFITAIWFAYSFVKQEENQNWLTLYGNIDIRDVSLSFRVSGRILSM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEEEEEEEEECCEEEEE
DVDEGAHVKKGQLLARLDKDTFIANLEMAKAQLKQAIANQKNASRTYKRREQLVDDGAVS
ECCCCCCCCCCHHEEEECCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHH
KALFDDAVAMKDSSSAEVSVAKANLEKAQISLNDTEIHAPTHGTILTRIQEPGAIVNVAE
HHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCEEECCCCCEEEEEECCCCCEEEECC
PVYTLAIDNPVWVRTYIDEPFLGRIYPGQDALVYTDSNPEKPYKGHIGFISPQAEFTPKI
CEEEEEECCCEEEEEECCCCCCCEECCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCHH
VETTQLRTDLVYRIRVVIDQPDNGLRQGMPVTVKIHLKANS
HHHHHHHHEEEEEEEEEEECCCCHHHCCCCEEEEEEEEECC
>Mature Secondary Structure 
SKKAIAISIVIALFFITAIWFAYSFVKQEENQNWLTLYGNIDIRDVSLSFRVSGRILSM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEEEEEEEEECCEEEEE
DVDEGAHVKKGQLLARLDKDTFIANLEMAKAQLKQAIANQKNASRTYKRREQLVDDGAVS
ECCCCCCCCCCHHEEEECCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHH
KALFDDAVAMKDSSSAEVSVAKANLEKAQISLNDTEIHAPTHGTILTRIQEPGAIVNVAE
HHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCEEECCCCCEEEEEECCCCCEEEECC
PVYTLAIDNPVWVRTYIDEPFLGRIYPGQDALVYTDSNPEKPYKGHIGFISPQAEFTPKI
CEEEEEECCCEEEEEECCCCCCCEECCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCHH
VETTQLRTDLVYRIRVVIDQPDNGLRQGMPVTVKIHLKANS
HHHHHHHHEEEEEEEEEEECCCCHHHCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA