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The map label for this gene is ydiK [C]

Identifier: 148360616

GI number: 148360616

Start: 906584

End: 907636

Strand: Direct

Name: ydiK [C]

Synonym: LPC_2562

Alternate gene names: 148360616

Gene position: 906584-907636 (Clockwise)

Preceding gene: 148360617

Following gene: 148360613

Centisome position: 25.35

GC content: 39.41

Gene sequence:

>1053_bases
ATGAATGAAAATCATAAAGAGCTAATTAGCATAGGGTTAACAGTCAGTATCGTTATCTTCTCGCTTTACATTGTTCATAA
ATTCATTCCTTCCATGATATGGGCCGCTATTATTGTTATAGCTACCTATCCCTTATACACCAGATGGCGTAAATTATTTG
GTAACAAACACAACACATCAGCGTTCTTATTTACAACACTGATGGGCTTGCTTTTCCTTATTCCCTTGAGTTGGCTTATA
GGTATCCTTATCAAAGAGTCTCAATTATTTATTAATTTTTTGCAGCATATTAATAAGGAAGGTGGGGCAGCTCCTGAGTT
TTTTAAAAATATTCCATTGGTTGGGGATGATTTAATTCAATATTGGGATGTGAATATTGGTAAGCCGGGAAGTATCAAGG
AGTTTTTATCTAATTTGCATGTAACGTTAACCCCGACCAGTTATTACATCAAGCAGATTGGGGTCAATTTGGCTCATCGT
AGTTTTCAAGTAGGATTTACCCTTTTAACACTTTTTTTCTTCTATCGTGATGGGGATAAATTACTATTACAAATTCAGCA
TATAGGAGAATATTGTTTGGGTGACAGATGGTTCCGTTATTCCGACAGGCTTCCCAGCGCGTTGCGAGGTACTGTGAATG
GAACTATTGTTGTTGGCATAGGGGTAGGTATATTAATGGGCATTTGCTATGCCTTGGTTGGGTTTCCAGCCCCTACATTG
ACTGGGTTTATTACCGCATTGGCAGCTATGATACCTTTTGTTGTTCCCATTGTTTTTATCATAGTCGCTTTGATTTTACT
TTCCGTTGGCAGTTTGATTGGAGGCATCATTGTTCTGGTATGGGGAACTTTGGTTATGTTTGTTGCTGATCATTTTGTAA
AGCCAGTTCTTATCGGTGGAGCGATACAATTACCTTTCCTTGCTGTTTTGTTCGGCATTTTGGGAGGAGTGGAAACTTTG
GGTTTGCTTGGCCTGTTTCTAGGGCCTATGGTGATGGTTTTGTTTGTGACCTTGTGGCAGGAACCCCAAGGCCACAAGAA
GTCATCAGGTTGA

Upstream 100 bases:

>100_bases
ATCAAAGAGTTCACGGTGGGTTAGGAATTATGCTGGACGACGTTTTAGCAGCAGTTCCTGCCTGGTGTATTATGCAAATC
CTGGTTTGGAGCTTTGCTTA

Downstream 100 bases:

>100_bases
CTTGTCAAAGGTAAAGTTAACACCCACATTGAATGTGCTGAGTGTATAGCGACTGTTGTTAAAGTCAGACAGGCTACTGG
TCGTGAGAAAGCGGAAGTCC

Product: transmembrane permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MNENHKELISIGLTVSIVIFSLYIVHKFIPSMIWAAIIVIATYPLYTRWRKLFGNKHNTSAFLFTTLMGLLFLIPLSWLI
GILIKESQLFINFLQHINKEGGAAPEFFKNIPLVGDDLIQYWDVNIGKPGSIKEFLSNLHVTLTPTSYYIKQIGVNLAHR
SFQVGFTLLTLFFFYRDGDKLLLQIQHIGEYCLGDRWFRYSDRLPSALRGTVNGTIVVGIGVGILMGICYALVGFPAPTL
TGFITALAAMIPFVVPIVFIIVALILLSVGSLIGGIIVLVWGTLVMFVADHFVKPVLIGGAIQLPFLAVLFGILGGVETL
GLLGLFLGPMVMVLFVTLWQEPQGHKKSSG

Sequences:

>Translated_350_residues
MNENHKELISIGLTVSIVIFSLYIVHKFIPSMIWAAIIVIATYPLYTRWRKLFGNKHNTSAFLFTTLMGLLFLIPLSWLI
GILIKESQLFINFLQHINKEGGAAPEFFKNIPLVGDDLIQYWDVNIGKPGSIKEFLSNLHVTLTPTSYYIKQIGVNLAHR
SFQVGFTLLTLFFFYRDGDKLLLQIQHIGEYCLGDRWFRYSDRLPSALRGTVNGTIVVGIGVGILMGICYALVGFPAPTL
TGFITALAAMIPFVVPIVFIIVALILLSVGSLIGGIIVLVWGTLVMFVADHFVKPVLIGGAIQLPFLAVLFGILGGVETL
GLLGLFLGPMVMVLFVTLWQEPQGHKKSSG
>Mature_350_residues
MNENHKELISIGLTVSIVIFSLYIVHKFIPSMIWAAIIVIATYPLYTRWRKLFGNKHNTSAFLFTTLMGLLFLIPLSWLI
GILIKESQLFINFLQHINKEGGAAPEFFKNIPLVGDDLIQYWDVNIGKPGSIKEFLSNLHVTLTPTSYYIKQIGVNLAHR
SFQVGFTLLTLFFFYRDGDKLLLQIQHIGEYCLGDRWFRYSDRLPSALRGTVNGTIVVGIGVGILMGICYALVGFPAPTL
TGFITALAAMIPFVVPIVFIIVALILLSVGSLIGGIIVLVWGTLVMFVADHFVKPVLIGGAIQLPFLAVLFGILGGVETL
GLLGLFLGPMVMVLFVTLWQEPQGHKKSSG

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=337, Percent_Identity=25.8160237388724, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38683; Mature: 38683

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNENHKELISIGLTVSIVIFSLYIVHKFIPSMIWAAIIVIATYPLYTRWRKLFGNKHNTS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AFLFTTLMGLLFLIPLSWLIGILIKESQLFINFLQHINKEGGAAPEFFKNIPLVGDDLIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHH
YWDVNIGKPGSIKEFLSNLHVTLTPTSYYIKQIGVNLAHRSFQVGFTLLTLFFFYRDGDK
HHCCCCCCCCCHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LLLQIQHIGEYCLGDRWFRYSDRLPSALRGTVNGTIVVGIGVGILMGICYALVGFPAPTL
HHHHHHHHHHHHHCCCHHHHHHCCCHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHH
TGFITALAAMIPFVVPIVFIIVALILLSVGSLIGGIIVLVWGTLVMFVADHFVKPVLIGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AIQLPFLAVLFGILGGVETLGLLGLFLGPMVMVLFVTLWQEPQGHKKSSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNENHKELISIGLTVSIVIFSLYIVHKFIPSMIWAAIIVIATYPLYTRWRKLFGNKHNTS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AFLFTTLMGLLFLIPLSWLIGILIKESQLFINFLQHINKEGGAAPEFFKNIPLVGDDLIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHH
YWDVNIGKPGSIKEFLSNLHVTLTPTSYYIKQIGVNLAHRSFQVGFTLLTLFFFYRDGDK
HHCCCCCCCCCHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LLLQIQHIGEYCLGDRWFRYSDRLPSALRGTVNGTIVVGIGVGILMGICYALVGFPAPTL
HHHHHHHHHHHHHCCCHHHHHHCCCHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHH
TGFITALAAMIPFVVPIVFIIVALILLSVGSLIGGIIVLVWGTLVMFVADHFVKPVLIGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AIQLPFLAVLFGILGGVETLGLLGLFLGPMVMVLFVTLWQEPQGHKKSSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]