Click here to switch to the map view.

The map label for this gene is 148360576

Identifier: 148360576

GI number: 148360576

Start: 951177

End: 952694

Strand: Direct

Name: 148360576

Synonym: LPC_2522

Alternate gene names: NA

Gene position: 951177-952694 (Clockwise)

Preceding gene: 148360577

Following gene: 148360575

Centisome position: 26.6

GC content: 31.62

Gene sequence:

>1518_bases
ATGTCAAAAGTTATTTTAGCAATCGCATATGAAGCTTATCAATTTAATGTTTTTTATCAATTATTCCAAAAGCTAGAAGG
GGAAAGAAAATACAATTTTATTATCTATTCCCCCTATTATTTACCTAATACGGAACAATATGTTCAACTTTGCACTATAA
GTGGGTTTCATTATATTTACAGCACAACAAAATATGGTGGAGATGCTGCAGTTCTGGATCAAATAGATAATTTAAGTGCT
AGCTTACATAATGTTCCCATTAAAAAAAATACAAGCAACCAATTCCCTAGAACTTACCTGATTTTAAAAAATAAACTTAG
AGACATAGGTAGATTTCCAGTCACCAGGTTTAAAAAAAATTTGCTTTATTTACTTAAAAAACTTGATGGCATGAATTTAT
ACAAAAAAATCACTCAAGAAATATTAGAGTTTGTTGATTATTACACTGATACAAGTTATAAAATTAATTCTATTATAAAT
AAACTTAATCCCTCATTATTGCTATTTACTGAAGATGTGGTTGAAAGAGACAGTAATATATGGATAAAAATCGCCCAAAA
AAAGGGTATTTTGTCCGCAATTCTGAGCTCAAGTGCTGCTGCTAATTACGATGCTGCTGAAACATATTATGATAACCCTC
ATTACCATTTCCCCACACACCTTCCACTTTACGCACAAAAAATTTTGAAATTATTTATAAAAAAATGGTGTTTTAATTAT
CGTGACAGAAAATTTATACGCCTTCCTCTCAAGCAGTTGATTGCTATGGATTTATTAGGCTTCGCACCAAAGCTACCATG
GACAATTAATAGTGGAGATTCCAATTTAATTTTGGTTGAAAGCCAATTCTCCAAAGATTTATTGGTAAATGAAGGTATTA
GCAGGAGGCGAATTAAAATTGTAGGAAGTTTAAAGTTTGACTCAATGAGTCCAATTTTAAATAGTTCAATTCGATATAAA
AAAGAGCTTTATCAAAAATACGAGTTGGATTTTGATAAGAAACTTATCCTGTGTGCTTTTCCCCCACATCTGCCCCAAAG
ACAACTTCCCGATTTTGAAAATTATGATGGCATGATAACGAAATGGATATCTACGCTTCAATTATCTAATTACAATGTTT
TATATTCTGTACACCCAAGTGGGTTTCCTGATACAGCAAATGCAATTCGCTCTCTGGATCAGATTGTTGTGGAAGACGAC
ATAGCAAATTTGATTCCTCTTTGTGATGTTTATCTGGCTTCTGTTTCAAGTACTATTAAATGGGCAAGAGCTTGTAATAA
GCTTGTTTTGGATTATGATTGTTTTCATTTTAATTATCGCACTTATGAAAAGGATCCTGCAATTATTGCTGTTAAAAGTC
TGAATGAGCTGAAAGAATGGATTACTCGCCTCAATAATCAATCAGTATCAAAGATACATGATCAATTAAATCCTTCTCTA
CATCCAAACTATTGGGGAATTATTGATGGGAGGTCTTTATGGCGAATTAATAATTATATTGATTGCCTGATTAAATAA

Upstream 100 bases:

>100_bases
GGACCAAAACTATTTTAGCAAATATATTGATGTTTCTATGCCGAGGGAGATTTATTTTTGTAAGATTATAAATCGATGGA
TTGACCATAAGGATCTTTTT

Downstream 100 bases:

>100_bases
CTTTGATACTCTATGAATGTTTAAAAAAATTGTAACTAATTAAGCTATCCCCTATAATGCACTGCAAAAGAGCATGATTA
AATGCTGAGCCTGTATTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MSKVILAIAYEAYQFNVFYQLFQKLEGERKYNFIIYSPYYLPNTEQYVQLCTISGFHYIYSTTKYGGDAAVLDQIDNLSA
SLHNVPIKKNTSNQFPRTYLILKNKLRDIGRFPVTRFKKNLLYLLKKLDGMNLYKKITQEILEFVDYYTDTSYKINSIIN
KLNPSLLLFTEDVVERDSNIWIKIAQKKGILSAILSSSAAANYDAAETYYDNPHYHFPTHLPLYAQKILKLFIKKWCFNY
RDRKFIRLPLKQLIAMDLLGFAPKLPWTINSGDSNLILVESQFSKDLLVNEGISRRRIKIVGSLKFDSMSPILNSSIRYK
KELYQKYELDFDKKLILCAFPPHLPQRQLPDFENYDGMITKWISTLQLSNYNVLYSVHPSGFPDTANAIRSLDQIVVEDD
IANLIPLCDVYLASVSSTIKWARACNKLVLDYDCFHFNYRTYEKDPAIIAVKSLNELKEWITRLNNQSVSKIHDQLNPSL
HPNYWGIIDGRSLWRINNYIDCLIK

Sequences:

>Translated_505_residues
MSKVILAIAYEAYQFNVFYQLFQKLEGERKYNFIIYSPYYLPNTEQYVQLCTISGFHYIYSTTKYGGDAAVLDQIDNLSA
SLHNVPIKKNTSNQFPRTYLILKNKLRDIGRFPVTRFKKNLLYLLKKLDGMNLYKKITQEILEFVDYYTDTSYKINSIIN
KLNPSLLLFTEDVVERDSNIWIKIAQKKGILSAILSSSAAANYDAAETYYDNPHYHFPTHLPLYAQKILKLFIKKWCFNY
RDRKFIRLPLKQLIAMDLLGFAPKLPWTINSGDSNLILVESQFSKDLLVNEGISRRRIKIVGSLKFDSMSPILNSSIRYK
KELYQKYELDFDKKLILCAFPPHLPQRQLPDFENYDGMITKWISTLQLSNYNVLYSVHPSGFPDTANAIRSLDQIVVEDD
IANLIPLCDVYLASVSSTIKWARACNKLVLDYDCFHFNYRTYEKDPAIIAVKSLNELKEWITRLNNQSVSKIHDQLNPSL
HPNYWGIIDGRSLWRINNYIDCLIK
>Mature_504_residues
SKVILAIAYEAYQFNVFYQLFQKLEGERKYNFIIYSPYYLPNTEQYVQLCTISGFHYIYSTTKYGGDAAVLDQIDNLSAS
LHNVPIKKNTSNQFPRTYLILKNKLRDIGRFPVTRFKKNLLYLLKKLDGMNLYKKITQEILEFVDYYTDTSYKINSIINK
LNPSLLLFTEDVVERDSNIWIKIAQKKGILSAILSSSAAANYDAAETYYDNPHYHFPTHLPLYAQKILKLFIKKWCFNYR
DRKFIRLPLKQLIAMDLLGFAPKLPWTINSGDSNLILVESQFSKDLLVNEGISRRRIKIVGSLKFDSMSPILNSSIRYKK
ELYQKYELDFDKKLILCAFPPHLPQRQLPDFENYDGMITKWISTLQLSNYNVLYSVHPSGFPDTANAIRSLDQIVVEDDI
ANLIPLCDVYLASVSSTIKWARACNKLVLDYDCFHFNYRTYEKDPAIIAVKSLNELKEWITRLNNQSVSKIHDQLNPSLH
PNYWGIIDGRSLWRINNYIDCLIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58908; Mature: 58776

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS00075 DHFR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVILAIAYEAYQFNVFYQLFQKLEGERKYNFIIYSPYYLPNTEQYVQLCTISGFHYIY
CCCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCEECCCHHHHHEEHEECCEEEEE
STTKYGGDAAVLDQIDNLSASLHNVPIKKNTSNQFPRTYLILKNKLRDIGRFPVTRFKKN
EECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
LLYLLKKLDGMNLYKKITQEILEFVDYYTDTSYKINSIINKLNPSLLLFTEDVVERDSNI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCCEEEEEHHHHHCCCCE
WIKIAQKKGILSAILSSSAAANYDAAETYYDNPHYHFPTHLPLYAQKILKLFIKKWCFNY
EEEEECCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
RDRKFIRLPLKQLIAMDLLGFAPKLPWTINSGDSNLILVESQFSKDLLVNEGISRRRIKI
CCCCEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCCHHHHCCCCCCCEEEE
VGSLKFDSMSPILNSSIRYKKELYQKYELDFDKKLILCAFPPHLPQRQLPDFENYDGMIT
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHH
KWISTLQLSNYNVLYSVHPSGFPDTANAIRSLDQIVVEDDIANLIPLCDVYLASVSSTIK
HHHHHHEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WARACNKLVLDYDCFHFNYRTYEKDPAIIAVKSLNELKEWITRLNNQSVSKIHDQLNPSL
HHHHHCCEEEEEEEEEECCEEECCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
HPNYWGIIDGRSLWRINNYIDCLIK
CCCCEEEECCCCEEEHHHHHHHHCC
>Mature Secondary Structure 
SKVILAIAYEAYQFNVFYQLFQKLEGERKYNFIIYSPYYLPNTEQYVQLCTISGFHYIY
CCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCEECCCHHHHHEEHEECCEEEEE
STTKYGGDAAVLDQIDNLSASLHNVPIKKNTSNQFPRTYLILKNKLRDIGRFPVTRFKKN
EECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
LLYLLKKLDGMNLYKKITQEILEFVDYYTDTSYKINSIINKLNPSLLLFTEDVVERDSNI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCCEEEEEHHHHHCCCCE
WIKIAQKKGILSAILSSSAAANYDAAETYYDNPHYHFPTHLPLYAQKILKLFIKKWCFNY
EEEEECCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
RDRKFIRLPLKQLIAMDLLGFAPKLPWTINSGDSNLILVESQFSKDLLVNEGISRRRIKI
CCCCEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCCHHHHCCCCCCCEEEE
VGSLKFDSMSPILNSSIRYKKELYQKYELDFDKKLILCAFPPHLPQRQLPDFENYDGMIT
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHH
KWISTLQLSNYNVLYSVHPSGFPDTANAIRSLDQIVVEDDIANLIPLCDVYLASVSSTIK
HHHHHHEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WARACNKLVLDYDCFHFNYRTYEKDPAIIAVKSLNELKEWITRLNNQSVSKIHDQLNPSL
HHHHHCCEEEEEEEEEECCEEECCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
HPNYWGIIDGRSLWRINNYIDCLIK
CCCCEEEECCCCEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA