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The map label for this gene is 148360533

Identifier: 148360533

GI number: 148360533

Start: 1005932

End: 1007167

Strand: Direct

Name: 148360533

Synonym: LPC_2475

Alternate gene names: NA

Gene position: 1005932-1007167 (Clockwise)

Preceding gene: 148360534

Following gene: 148360528

Centisome position: 28.13

GC content: 34.63

Gene sequence:

>1236_bases
ATGGATACCAAGGGTATTTTATTAGCTCCTTTTTTCTTTATCTCATTTATGTTTTTTATTCCGATCAGTCCTACGATAAA
GTCTATTTGTTTCATTTGCAGTTTAATTGCTGTATTGATTACTCCACAATACAGAAAACATATTGTTTATGCTTATAATA
CTATGTGGGGACGCGCTGCATTTTGTTTGTTTCTCTTTGTCGTTATTGCAAGTTTATGGAGTCCCGCTCCTTATTCAATG
CAATGGATGGTCATTGGTAAATATTGTAAATTAATTTATCTTCCCATTTTAGCTACTGGTTTTATTAATCCCAAAGTAAG
AAACTGGAGTATCAATAGCTATTTGGCTGCTATTTTTATTACTTGTGTTATTTCCATCTTAAAGGCTAAAAATATTATTG
CGTCAGAAGATCCGGGTGAGGTTTTCTACAATCATATTATTACTGGTTTTATGGTGGCATTGGCAGCCTATTTAACAGGA
TTGCTGGCTTTTCAAAATTCGGGCTGGTTACGACTTATTTATATCTTCATGATGTTTCTAACCAGTTACCAAGTGCTTTT
TATAAATACTGGAAGAACGGGTTATTTGGTCTACTTTATTTTGATGTTATTGCTTTTGATACAAAAATTAAACTTCAAAC
AGGCTTTAGCAGGAATTGTTCTCTTCAGTGGCATCATTGCTTTGGCATATCATCATAGCCCTGTAATGCAAACCAGAATT
TATGATTTAATTCAGGATATCAAGTTATTAAAACAACATAATAAAAATACATCGATAGGCTATAGAATGCAGTTTCATCA
CTATGCCAAGCAATTGATGTTGAAACATCCTTTTATTGGAATAGGCACAGGTGGATTTAAATACAGTTATTCACAAGACG
TACCTGTCCCAAGTTGGGGTAAAGAGTTGACAGATCCACACAGTCAGTATTGGATGACTTTGGCTGAGCAAGGTTTAATT
GGTCTGGTACTTTTGGTAATATTTTTAGCGAGTTTGTTTATAACATCATTTCAATTGACTAGCTCCAGACCTATTCTTTT
AGGTGTTTTATTTTCTTTTTGTATAGGTTCTATTTCCGACACGATTTTATGCTATTCGACTGCAGGTTATTTGTTGGTAG
TGATGAGTGCCTTATGTTTTGGTGAGTTAATTGAGAAGCGTAGAGTCAAGGGCGTAGAAGAAGATCATCTTGTTCCTTTA
TCAGCCCATGCTCCAGCAGCAATAAGTCAGACCTAA

Upstream 100 bases:

>100_bases
CTTTTTATCGCGGGGTCAAACAAATATATAAAGACAGGGATATCAATAAATTACCCAGTGTAAATCATATAAAAGAGGAA
TAATCGTGCGATTAACCATA

Downstream 100 bases:

>100_bases
TCAATAAACAGAAATTTGCTCAACAGGTTTTTGCAATGAACATTCTTCCGAAACATACCCGTCATTGCAAACCACAAGAC
CCGATGAATTTAATTGTGGA

Product: O-antigen biosynthesis protein

Products: NA

Alternate protein names: O-Antigen Polymerase; O-Antigen Ligase; Lipid A Core -O-Antigen Ligase; Inner Membrane Protein

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MDTKGILLAPFFFISFMFFIPISPTIKSICFICSLIAVLITPQYRKHIVYAYNTMWGRAAFCLFLFVVIASLWSPAPYSM
QWMVIGKYCKLIYLPILATGFINPKVRNWSINSYLAAIFITCVISILKAKNIIASEDPGEVFYNHIITGFMVALAAYLTG
LLAFQNSGWLRLIYIFMMFLTSYQVLFINTGRTGYLVYFILMLLLLIQKLNFKQALAGIVLFSGIIALAYHHSPVMQTRI
YDLIQDIKLLKQHNKNTSIGYRMQFHHYAKQLMLKHPFIGIGTGGFKYSYSQDVPVPSWGKELTDPHSQYWMTLAEQGLI
GLVLLVIFLASLFITSFQLTSSRPILLGVLFSFCIGSISDTILCYSTAGYLLVVMSALCFGELIEKRRVKGVEEDHLVPL
SAHAPAAISQT

Sequences:

>Translated_411_residues
MDTKGILLAPFFFISFMFFIPISPTIKSICFICSLIAVLITPQYRKHIVYAYNTMWGRAAFCLFLFVVIASLWSPAPYSM
QWMVIGKYCKLIYLPILATGFINPKVRNWSINSYLAAIFITCVISILKAKNIIASEDPGEVFYNHIITGFMVALAAYLTG
LLAFQNSGWLRLIYIFMMFLTSYQVLFINTGRTGYLVYFILMLLLLIQKLNFKQALAGIVLFSGIIALAYHHSPVMQTRI
YDLIQDIKLLKQHNKNTSIGYRMQFHHYAKQLMLKHPFIGIGTGGFKYSYSQDVPVPSWGKELTDPHSQYWMTLAEQGLI
GLVLLVIFLASLFITSFQLTSSRPILLGVLFSFCIGSISDTILCYSTAGYLLVVMSALCFGELIEKRRVKGVEEDHLVPL
SAHAPAAISQT
>Mature_411_residues
MDTKGILLAPFFFISFMFFIPISPTIKSICFICSLIAVLITPQYRKHIVYAYNTMWGRAAFCLFLFVVIASLWSPAPYSM
QWMVIGKYCKLIYLPILATGFINPKVRNWSINSYLAAIFITCVISILKAKNIIASEDPGEVFYNHIITGFMVALAAYLTG
LLAFQNSGWLRLIYIFMMFLTSYQVLFINTGRTGYLVYFILMLLLLIQKLNFKQALAGIVLFSGIIALAYHHSPVMQTRI
YDLIQDIKLLKQHNKNTSIGYRMQFHHYAKQLMLKHPFIGIGTGGFKYSYSQDVPVPSWGKELTDPHSQYWMTLAEQGLI
GLVLLVIFLASLFITSFQLTSSRPILLGVLFSFCIGSISDTILCYSTAGYLLVVMSALCFGELIEKRRVKGVEEDHLVPL
SAHAPAAISQT

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46424; Mature: 46424

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTKGILLAPFFFISFMFFIPISPTIKSICFICSLIAVLITPQYRKHIVYAYNTMWGRAA
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHEEEEHHHHHHHHH
FCLFLFVVIASLWSPAPYSMQWMVIGKYCKLIYLPILATGFINPKVRNWSINSYLAAIFI
HHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
TCVISILKAKNIIASEDPGEVFYNHIITGFMVALAAYLTGLLAFQNSGWLRLIYIFMMFL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TSYQVLFINTGRTGYLVYFILMLLLLIQKLNFKQALAGIVLFSGIIALAYHHSPVMQTRI
CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
YDLIQDIKLLKQHNKNTSIGYRMQFHHYAKQLMLKHPFIGIGTGGFKYSYSQDVPVPSWG
HHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCC
KELTDPHSQYWMTLAEQGLIGLVLLVIFLASLFITSFQLTSSRPILLGVLFSFCIGSISD
CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
TILCYSTAGYLLVVMSALCFGELIEKRRVKGVEEDHLVPLSAHAPAAISQT
CEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MDTKGILLAPFFFISFMFFIPISPTIKSICFICSLIAVLITPQYRKHIVYAYNTMWGRAA
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHEEEEHHHHHHHHH
FCLFLFVVIASLWSPAPYSMQWMVIGKYCKLIYLPILATGFINPKVRNWSINSYLAAIFI
HHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
TCVISILKAKNIIASEDPGEVFYNHIITGFMVALAAYLTGLLAFQNSGWLRLIYIFMMFL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TSYQVLFINTGRTGYLVYFILMLLLLIQKLNFKQALAGIVLFSGIIALAYHHSPVMQTRI
CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
YDLIQDIKLLKQHNKNTSIGYRMQFHHYAKQLMLKHPFIGIGTGGFKYSYSQDVPVPSWG
HHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCC
KELTDPHSQYWMTLAEQGLIGLVLLVIFLASLFITSFQLTSSRPILLGVLFSFCIGSISD
CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
TILCYSTAGYLLVVMSALCFGELIEKRRVKGVEEDHLVPLSAHAPAAISQT
CEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA