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The map label for this gene is recO [H]

Identifier: 148360407

GI number: 148360407

Start: 1130537

End: 1131226

Strand: Direct

Name: recO [H]

Synonym: LPC_2346

Alternate gene names: 148360407

Gene position: 1130537-1131226 (Clockwise)

Preceding gene: 148360408

Following gene: 148360404

Centisome position: 31.61

GC content: 42.46

Gene sequence:

>690_bases
ATGACCAGTAAATCGCTGAATGCTTGGGTAATTCATAAGCAATGGTCTGGAGATACCAGTGCCAGACTAAAGCTTTTTAC
TAGGGAAATGGGATTAATTAATTGCTTGTGCAAGGGAGGGCGAACTCCCAAGAAACAGTCATTACTTCAAGCTTTTATTC
CTCTGTGGGTTAGTATCGAAGAGCGTTATGATCAATATTACACACGAAACATTGAAAGCACTTCTTCCAGACTGGATCTT
GAGGGACATTCTCTTTTTTCAGGCCTGTACATCAATGAGTTACTCTATTATACGCTGAGCCCGGATTTCCCTGACCCGGA
TTTATTTGATGCTTACTTGTTCACCTTAAATGGCATAGCATTAGCTAGAGAAAGAGAGGTGATAGAAGCTTTGCTGCGTC
GCTTTGAATGGGCTTTGCTTAAGGCTTGTGGATACACGTTTTCATTTCTTCATGAGGCGCGAACAGGAGAGTTAATTGTT
CCCGATTCTTATTACCAATTTGTAGCTGGGGAGGGCTTTATTTTAGGTGGTGATAAAAAAATACCTGGTGAGCATTTACT
TGCTATAGCGGCAGATAATTTAAGCGAGTCCGCTTATTTAAAATCAGCGAAATTCATTATGCGTCAGGCAATCGATCATC
TTTTGGGGGGACGGGAAATCAAGGCCCGGTCCTTGTATGGACCGGCCTGA

Upstream 100 bases:

>100_bases
GACATGGAAAAAATGCTAGATAAAAAGGTTTTTTTACAATGTTGGTGTAAAGTGAAATCAGGCTGGTCAGATGATGAGAG
AATACTGAAGCAATTGGGAT

Downstream 100 bases:

>100_bases
GATAGTGGTATGATCGCCAAGCGCTTCTATGCTATCACATCAGGTCCAGGGTTTATTATGTTAGGTGAGGTCTGGATAGA
TTTTCGATTTCTTCCACAGG

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MTSKSLNAWVIHKQWSGDTSARLKLFTREMGLINCLCKGGRTPKKQSLLQAFIPLWVSIEERYDQYYTRNIESTSSRLDL
EGHSLFSGLYINELLYYTLSPDFPDPDLFDAYLFTLNGIALAREREVIEALLRRFEWALLKACGYTFSFLHEARTGELIV
PDSYYQFVAGEGFILGGDKKIPGEHLLAIAADNLSESAYLKSAKFIMRQAIDHLLGGREIKARSLYGPA

Sequences:

>Translated_229_residues
MTSKSLNAWVIHKQWSGDTSARLKLFTREMGLINCLCKGGRTPKKQSLLQAFIPLWVSIEERYDQYYTRNIESTSSRLDL
EGHSLFSGLYINELLYYTLSPDFPDPDLFDAYLFTLNGIALAREREVIEALLRRFEWALLKACGYTFSFLHEARTGELIV
PDSYYQFVAGEGFILGGDKKIPGEHLLAIAADNLSESAYLKSAKFIMRQAIDHLLGGREIKARSLYGPA
>Mature_228_residues
TSKSLNAWVIHKQWSGDTSARLKLFTREMGLINCLCKGGRTPKKQSLLQAFIPLWVSIEERYDQYYTRNIESTSSRLDLE
GHSLFSGLYINELLYYTLSPDFPDPDLFDAYLFTLNGIALAREREVIEALLRRFEWALLKACGYTFSFLHEARTGELIVP
DSYYQFVAGEGFILGGDKKIPGEHLLAIAADNLSESAYLKSAKFIMRQAIDHLLGGREIKARSLYGPA

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

Organism=Escherichia coli, GI2367140, Length=225, Percent_Identity=34.6666666666667, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 25989; Mature: 25858

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKSLNAWVIHKQWSGDTSARLKLFTREMGLINCLCKGGRTPKKQSLLQAFIPLWVSIE
CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ERYDQYYTRNIESTSSRLDLEGHSLFSGLYINELLYYTLSPDFPDPDLFDAYLFTLNGIA
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCHH
LAREREVIEALLRRFEWALLKACGYTFSFLHEARTGELIVPDSYYQFVAGEGFILGGDKK
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEECCHHHHHHCCCEEEECCCCC
IPGEHLLAIAADNLSESAYLKSAKFIMRQAIDHLLGGREIKARSLYGPA
CCHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC
>Mature Secondary Structure 
TSKSLNAWVIHKQWSGDTSARLKLFTREMGLINCLCKGGRTPKKQSLLQAFIPLWVSIE
CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ERYDQYYTRNIESTSSRLDLEGHSLFSGLYINELLYYTLSPDFPDPDLFDAYLFTLNGIA
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCHH
LAREREVIEALLRRFEWALLKACGYTFSFLHEARTGELIVPDSYYQFVAGEGFILGGDKK
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEECCHHHHHHCCCEEEECCCCC
IPGEHLLAIAADNLSESAYLKSAKFIMRQAIDHLLGGREIKARSLYGPA
CCHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA