Click here to switch to the map view.

The map label for this gene is 148360369

Identifier: 148360369

GI number: 148360369

Start: 1180479

End: 1181378

Strand: Reverse

Name: 148360369

Synonym: LPC_2307

Alternate gene names: NA

Gene position: 1181378-1180479 (Counterclockwise)

Preceding gene: 148360368

Following gene: 148360371

Centisome position: 33.03

GC content: 40.0

Gene sequence:

>900_bases
ATGAGTAAGTCCAAACTTAAAAATGCGCAGTATTCCATCAATGAATGTATTAAGAAAATCCAAAACTACTCCCACGCCAG
CAGAGCGGATATGAAACACATGCTGAATCGCTGCGTCAAAGATTTGCACGCGCTAGGCTATATGGTCACACACATCAAAG
GATTAAAACCAAAGCACATACACATCCTGGTTGAACACTGGAAAACCCAGAATAAAAATCCTGCAACAATAAAAAATTAC
ATGGCTAAACTGCGAAAAGTAGCCTCGGTGCTAAACAAGCCAGAACTGGTTAAGCAAGGCAACGACAGCTATCAAATCAA
TAAACGTAATTATGCTCCTCAATACAATAAAGCAATCAACAATGTCGATTTTTCTAAATGCTCAGACCCAATGATCCGTT
TATCCCTGGAAGCCCAATTCCTTTTTGGTCTTCGCCGTGAAGAATCTATGAAGATTGTACTTAGTGATGCCTGGCAAGGA
AATAAATTGGTTATAAAGCCTAGCTGGACAAAAGGTGGCATCGGTCGTGATATTAGACTCACGAATGAGCAACAACGACA
ATGGCTACTCAATGCGATAAAGCAAGTTCCTGCTGGACAATCTCTCATTCCTAAAGAAAAGACCTATAAAAATCATCTTG
CTCAGTATCATGAAGTGATAGAAAAAATGGGCTTAAGCAAATGCCATGGCCTTCGCCATGCTTATGCTCAGCGAAGATAT
CATGAAATTACAAAATCCTATGACAAAACTGGCAATGGACTTATATGCCCAATTCAAGGAGGCAGAGTATACAACGAACT
GAATCCTCTTGAAAAATATTGGGATAGAACCGCAAGGGAAATTATTAGCCAGTCGCTTGGGCATTCGAGATTGAGTATTA
CAAAGATCTACTTAGGCTGA

Upstream 100 bases:

>100_bases
GCTCTGTATCTTTTACCACTATTGGGGAAATACGAAGCCTATTGGGTTATTCGCAGCGAAATGGGCATCAAATCCCGTGA
TTCTTTATGGAGGTATCTCA

Downstream 100 bases:

>100_bases
CAATCTTTGTATTTTTAAATCTTCAATACACAATTTCATTTTATAGTGTGGTACTGGGTGCCATGGAGCTATAAATTCCC
CAATGATTTCAAAACCAGCT

Product: putative integrase

Products: NA

Alternate protein names: Phage Integrase Family Protein; Fis Family Transcriptional Regulator; Poisomerase/Recombinase/Integrase; Integrase Protein; DNA Breaking-Rejoining Protein; Tyrosine Recombinase

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSKSKLKNAQYSINECIKKIQNYSHASRADMKHMLNRCVKDLHALGYMVTHIKGLKPKHIHILVEHWKTQNKNPATIKNY
MAKLRKVASVLNKPELVKQGNDSYQINKRNYAPQYNKAINNVDFSKCSDPMIRLSLEAQFLFGLRREESMKIVLSDAWQG
NKLVIKPSWTKGGIGRDIRLTNEQQRQWLLNAIKQVPAGQSLIPKEKTYKNHLAQYHEVIEKMGLSKCHGLRHAYAQRRY
HEITKSYDKTGNGLICPIQGGRVYNELNPLEKYWDRTAREIISQSLGHSRLSITKIYLG

Sequences:

>Translated_299_residues
MSKSKLKNAQYSINECIKKIQNYSHASRADMKHMLNRCVKDLHALGYMVTHIKGLKPKHIHILVEHWKTQNKNPATIKNY
MAKLRKVASVLNKPELVKQGNDSYQINKRNYAPQYNKAINNVDFSKCSDPMIRLSLEAQFLFGLRREESMKIVLSDAWQG
NKLVIKPSWTKGGIGRDIRLTNEQQRQWLLNAIKQVPAGQSLIPKEKTYKNHLAQYHEVIEKMGLSKCHGLRHAYAQRRY
HEITKSYDKTGNGLICPIQGGRVYNELNPLEKYWDRTAREIISQSLGHSRLSITKIYLG
>Mature_298_residues
SKSKLKNAQYSINECIKKIQNYSHASRADMKHMLNRCVKDLHALGYMVTHIKGLKPKHIHILVEHWKTQNKNPATIKNYM
AKLRKVASVLNKPELVKQGNDSYQINKRNYAPQYNKAINNVDFSKCSDPMIRLSLEAQFLFGLRREESMKIVLSDAWQGN
KLVIKPSWTKGGIGRDIRLTNEQQRQWLLNAIKQVPAGQSLIPKEKTYKNHLAQYHEVIEKMGLSKCHGLRHAYAQRRYH
EITKSYDKTGNGLICPIQGGRVYNELNPLEKYWDRTAREIISQSLGHSRLSITKIYLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34594; Mature: 34462

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSKLKNAQYSINECIKKIQNYSHASRADMKHMLNRCVKDLHALGYMVTHIKGLKPKHI
CCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
HILVEHWKTQNKNPATIKNYMAKLRKVASVLNKPELVKQGNDSYQINKRNYAPQYNKAIN
EEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCCCCCHHHHHHC
NVDFSKCSDPMIRLSLEAQFLFGLRREESMKIVLSDAWQGNKLVIKPSWTKGGIGRDIRL
CCCHHHCCCCEEEEEHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEEE
TNEQQRQWLLNAIKQVPAGQSLIPKEKTYKNHLAQYHEVIEKMGLSKCHGLRHAYAQRRY
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
HEITKSYDKTGNGLICPIQGGRVYNELNPLEKYWDRTAREIISQSLGHSRLSITKIYLG
HHHHHHHCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
>Mature Secondary Structure 
SKSKLKNAQYSINECIKKIQNYSHASRADMKHMLNRCVKDLHALGYMVTHIKGLKPKHI
CHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
HILVEHWKTQNKNPATIKNYMAKLRKVASVLNKPELVKQGNDSYQINKRNYAPQYNKAIN
EEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCCCCCHHHHHHC
NVDFSKCSDPMIRLSLEAQFLFGLRREESMKIVLSDAWQGNKLVIKPSWTKGGIGRDIRL
CCCHHHCCCCEEEEEHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEEE
TNEQQRQWLLNAIKQVPAGQSLIPKEKTYKNHLAQYHEVIEKMGLSKCHGLRHAYAQRRY
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
HEITKSYDKTGNGLICPIQGGRVYNELNPLEKYWDRTAREIISQSLGHSRLSITKIYLG
HHHHHHHCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA