Click here to switch to the map view.

The map label for this gene is 148360261

Identifier: 148360261

GI number: 148360261

Start: 1288727

End: 1289215

Strand: Direct

Name: 148360261

Synonym: LPC_2196

Alternate gene names: NA

Gene position: 1288727-1289215 (Clockwise)

Preceding gene: 148360265

Following gene: 148360258

Centisome position: 36.03

GC content: 27.4

Gene sequence:

>489_bases
TTGAGCAGTTATATCGAATTCACGTTAACATTAATTATTGTCTGTGTAGGTTGGCTTCAATTTGGAGATTTAAATAAAAC
TACTAAGGGTGATTTTTTATTAAGGATTGATGAACGATTCGGTCATGAAACAATCATTAAAGCACGGGCGATAATTCATA
AATTTTACTGCGAAACTTATGATGAAAATATATGCAAAGAGACTCACAGGCGAATTATTGGTGAAAAGATCATGGAAATT
ATTCTTGTTAAAAAACAGTCAACTAATTTCATTTATTTAATGAATTTTTTAGATTTTTTAGAAACTATAGCTTATTTCAC
AAATAAAAATTACATGTCTGAAAAGGATATAAAAGAGCTTTTAGGTGGCTCAATTCCGTATTATTATGAAGTTTTTAAAC
CATTTATTAATTATAGGCGTGCGAAATATAACAGTGAAAATTACTTTTGTGAGCTTGAGCGTCTAATATATAAAATAAAT
AAAAAATAG

Upstream 100 bases:

>100_bases
TATTCAATTTTATGGTCAATATATTGGCCGGTTTAGCTGCTTATGCACTTAAACCAAAGAAGCCCTCTTTAAATATTCAA
CGATCTTTTATGGCTGTTGT

Downstream 100 bases:

>100_bases
TCTTGTGTAGACTGGGTTATTATTAAGCCCAGACAATATAGTCTGTCTGTTATTTTGGAACAGCCGAAACTATATCGTTG
ATTTATCAACAATATAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSSYIEFTLTLIIVCVGWLQFGDLNKTTKGDFLLRIDERFGHETIIKARAIIHKFYCETYDENICKETHRRIIGEKIMEI
ILVKKQSTNFIYLMNFLDFLETIAYFTNKNYMSEKDIKELLGGSIPYYYEVFKPFINYRRAKYNSENYFCELERLIYKIN
KK

Sequences:

>Translated_162_residues
MSSYIEFTLTLIIVCVGWLQFGDLNKTTKGDFLLRIDERFGHETIIKARAIIHKFYCETYDENICKETHRRIIGEKIMEI
ILVKKQSTNFIYLMNFLDFLETIAYFTNKNYMSEKDIKELLGGSIPYYYEVFKPFINYRRAKYNSENYFCELERLIYKIN
KK
>Mature_161_residues
SSYIEFTLTLIIVCVGWLQFGDLNKTTKGDFLLRIDERFGHETIIKARAIIHKFYCETYDENICKETHRRIIGEKIMEII
LVKKQSTNFIYLMNFLDFLETIAYFTNKNYMSEKDIKELLGGSIPYYYEVFKPFINYRRAKYNSENYFCELERLIYKINK
K

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19534; Mature: 19403

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSYIEFTLTLIIVCVGWLQFGDLNKTTKGDFLLRIDERFGHETIIKARAIIHKFYCETY
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHH
DENICKETHRRIIGEKIMEIILVKKQSTNFIYLMNFLDFLETIAYFTNKNYMSEKDIKEL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LGGSIPYYYEVFKPFINYRRAKYNSENYFCELERLIYKINKK
HCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSYIEFTLTLIIVCVGWLQFGDLNKTTKGDFLLRIDERFGHETIIKARAIIHKFYCETY
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHH
DENICKETHRRIIGEKIMEIILVKKQSTNFIYLMNFLDFLETIAYFTNKNYMSEKDIKEL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LGGSIPYYYEVFKPFINYRRAKYNSENYFCELERLIYKINKK
HCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA