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The map label for this gene is yafQ [H]

Identifier: 148360242

GI number: 148360242

Start: 1301148

End: 1301429

Strand: Direct

Name: yafQ [H]

Synonym: LPC_2177

Alternate gene names: 148360242

Gene position: 1301148-1301429 (Clockwise)

Preceding gene: 148360243

Following gene: 148360241

Centisome position: 36.38

GC content: 31.21

Gene sequence:

>282_bases
ATGCTTGAGATTGTTCGTTCGTCCCAGTTTAAAAAAGATCTTAAGAAAATTATTAAACTTAAACAAGGAAAGGATTTAGA
ATTATTGGAAGAGATTGTTAATAAGCTACAACATTCTGAAAAATTACCTCTTAAAAATTGTGATCATCTTCTTTCAGGGG
ATTGGCGGGGGTTTAGAGAATGTCACATTTCACCGGATTGGTTGCTTATTTATAAAAATGAAAATGAACTAAAGCTATTA
AGATTAGTTCGAACTGGGTCTCATTCTGATTTATTTCGTTAA

Upstream 100 bases:

>100_bases
AATAATCTAACCCTTGAGGCAATTGAGGAATTAGAGAGTGGCGGAGGAAAGAAATTTTCATCTTTTAAATCAATGATTGA
TGATTTAGAAGAGGATGAGA

Downstream 100 bases:

>100_bases
CGGATAATTTTAATTTGAATGAAGTCTTCGGATATTCCGGATTGTTCGTTTTGGATAGATTAATTTTTATATTCACTATT
GAGTAGTCAAGGATTACTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MLEIVRSSQFKKDLKKIIKLKQGKDLELLEEIVNKLQHSEKLPLKNCDHLLSGDWRGFRECHISPDWLLIYKNENELKLL
RLVRTGSHSDLFR

Sequences:

>Translated_93_residues
MLEIVRSSQFKKDLKKIIKLKQGKDLELLEEIVNKLQHSEKLPLKNCDHLLSGDWRGFRECHISPDWLLIYKNENELKLL
RLVRTGSHSDLFR
>Mature_93_residues
MLEIVRSSQFKKDLKKIIKLKQGKDLELLEEIVNKLQHSEKLPLKNCDHLLSGDWRGFRECHISPDWLLIYKNENELKLL
RLVRTGSHSDLFR

Specific function: Unknown

COG id: COG3041

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0711 [H]

Homologues:

Organism=Escherichia coli, GI1786419, Length=91, Percent_Identity=41.7582417582418, Blast_Score=69, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004386
- InterPro:   IPR012753 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11067; Mature: 11067

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEIVRSSQFKKDLKKIIKLKQGKDLELLEEIVNKLQHSEKLPLKNCDHLLSGDWRGFRE
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHH
CHISPDWLLIYKNENELKLLRLVRTGSHSDLFR
CCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLEIVRSSQFKKDLKKIIKLKQGKDLELLEEIVNKLQHSEKLPLKNCDHLLSGDWRGFRE
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHH
CHISPDWLLIYKNENELKLLRLVRTGSHSDLFR
CCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7596361; 9278503 [H]