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The map label for this gene is tnpA [H]

Identifier: 148360204

GI number: 148360204

Start: 2832576

End: 2833751

Strand: Reverse

Name: tnpA [H]

Synonym: LPC_2136

Alternate gene names: 148360204

Gene position: 2833751-2832576 (Counterclockwise)

Preceding gene: 148360203

Following gene: 148359959

Centisome position: 79.23

GC content: 38.52

Gene sequence:

>1176_bases
GTGCCTAGGAAGAATCTTATCCTAAATTTACCTGGATTTTCCATAGTAAAAGTGAGCGGATATCAACCATTATTATTAGA
TGTGAGATACAACCGCTTAGCGCGTTGTAGTCACTGTCAAAGTAAGAAAGTACGGAAGAAAGCATCGTATATACGAAGAG
TTCATCATGAACTAATAGGTCATAGGCGAAGTATATTAAGGTTTAAAGCGTATAAGTTGTATTGTTATGCGTGTGGTCGT
TATGGAAATCAACAATTCCCCGGTATTAATAAACATCAACGTGCTACTTGGCGAGTTCAGGCGGCGGTGTTTCATGAGCA
TAGCCGAGGAGTATCTCAAAAAGACTTATCAGAACGTTATAAGAAAGGCAAAGCGACCATAGAACGTTGGTATCAACGTC
ACTATGAAGAACAACATAGAGAACTACTGAATAAGCCCTGTCCTGTAGTGCTTGGTATTGATGAACATTTCTTCAGTAAG
AAAGAGGGTTTTGCTACTACGTTATGTGACCTGAGAAAGCAAAAGGTCTTTGATGTAGTTCGTGGCCGAAGTGAAGGGGA
TTTAAAAGACTATCTGCAGCAGCTGCCTGGAAAAGAACGAGTTAAAGTGATCTGTATGGACTTAAGCAGTACCTATCGGT
CTATTGTAAAAAAATACTTTCCTAATGCAATGATAGTTGCCGATAGATTCCATGTAATCCGTTTAATTCAACATCAATGT
ATGATGACTTATAGAGAACTCTCCAGCGACATAAAAAGTAATAGGGGCATCTTAGCTTTATTAAGAACTAGACCAGATAA
CTTGACTGAAGAAAAGAAGGCTAAAAGAGATGCATTTTTAACTCAAAATCCTGCTATTGAAGCCATCTATCAATTTCAGC
AAGAGCTTCATTCTCTGTTAATGAAAAGAGCTTTAACTCAACGTGCATGCCGTAAAGTAATCCCTACATTCTTGGATATG
CTAGCTGAATTAAAACAGAGCACCTTTAAAGCGTTAGCATCATTAGGAAAAACGCTTAGTGCTTGGAAAGATGAAGTCGC
CAGAATGTGGCGGTTTAGTAAATCTAATGGAATAACTGAAGGCTTTCATCGCAAAATGAAACTCATTCAGCGAAGGGCTT
ATGGTTTTAGAAATTTTGAAAATTATAGAGTGCGTGTTAGGGTGCTCTGCGGGTGA

Upstream 100 bases:

>100_bases
GATATGTTTGAAATATTTGGCTCTACCCCAATTAAGGGGGCACTTTAATCAAATTAGTCTAGACTAAATCCTTGATTTTG
CGATCAAAAAGGAGATTAAA

Downstream 100 bases:

>100_bases
TTAAAGACTGCCCCCTTAAATGGGAAAGAGCCAATTTTTTACGGCTCTATCAAGACGAAATATTAGATCTATAATTAGAC
AGTCAGCATATTTTTTTATC

Product: TnpA transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MPRKNLILNLPGFSIVKVSGYQPLLLDVRYNRLARCSHCQSKKVRKKASYIRRVHHELIGHRRSILRFKAYKLYCYACGR
YGNQQFPGINKHQRATWRVQAAVFHEHSRGVSQKDLSERYKKGKATIERWYQRHYEEQHRELLNKPCPVVLGIDEHFFSK
KEGFATTLCDLRKQKVFDVVRGRSEGDLKDYLQQLPGKERVKVICMDLSSTYRSIVKKYFPNAMIVADRFHVIRLIQHQC
MMTYRELSSDIKSNRGILALLRTRPDNLTEEKKAKRDAFLTQNPAIEAIYQFQQELHSLLMKRALTQRACRKVIPTFLDM
LAELKQSTFKALASLGKTLSAWKDEVARMWRFSKSNGITEGFHRKMKLIQRRAYGFRNFENYRVRVRVLCG

Sequences:

>Translated_391_residues
MPRKNLILNLPGFSIVKVSGYQPLLLDVRYNRLARCSHCQSKKVRKKASYIRRVHHELIGHRRSILRFKAYKLYCYACGR
YGNQQFPGINKHQRATWRVQAAVFHEHSRGVSQKDLSERYKKGKATIERWYQRHYEEQHRELLNKPCPVVLGIDEHFFSK
KEGFATTLCDLRKQKVFDVVRGRSEGDLKDYLQQLPGKERVKVICMDLSSTYRSIVKKYFPNAMIVADRFHVIRLIQHQC
MMTYRELSSDIKSNRGILALLRTRPDNLTEEKKAKRDAFLTQNPAIEAIYQFQQELHSLLMKRALTQRACRKVIPTFLDM
LAELKQSTFKALASLGKTLSAWKDEVARMWRFSKSNGITEGFHRKMKLIQRRAYGFRNFENYRVRVRVLCG
>Mature_390_residues
PRKNLILNLPGFSIVKVSGYQPLLLDVRYNRLARCSHCQSKKVRKKASYIRRVHHELIGHRRSILRFKAYKLYCYACGRY
GNQQFPGINKHQRATWRVQAAVFHEHSRGVSQKDLSERYKKGKATIERWYQRHYEEQHRELLNKPCPVVLGIDEHFFSKK
EGFATTLCDLRKQKVFDVVRGRSEGDLKDYLQQLPGKERVKVICMDLSSTYRSIVKKYFPNAMIVADRFHVIRLIQHQCM
MTYRELSSDIKSNRGILALLRTRPDNLTEEKKAKRDAFLTQNPAIEAIYQFQQELHSLLMKRALTQRACRKVIPTFLDML
AELKQSTFKALASLGKTLSAWKDEVARMWRFSKSNGITEGFHRKMKLIQRRAYGFRNFENYRVRVRVLCG

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 46094; Mature: 45962

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKNLILNLPGFSIVKVSGYQPLLLDVRYNRLARCSHCQSKKVRKKASYIRRVHHELIG
CCCCCEEEECCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRRSILRFKAYKLYCYACGRYGNQQFPGINKHQRATWRVQAAVFHEHSRGVSQKDLSERY
HHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
KKGKATIERWYQRHYEEQHRELLNKPCPVVLGIDEHFFSKKEGFATTLCDLRKQKVFDVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHH
RGRSEGDLKDYLQQLPGKERVKVICMDLSSTYRSIVKKYFPNAMIVADRFHVIRLIQHQC
CCCCCCCHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH
MMTYRELSSDIKSNRGILALLRTRPDNLTEEKKAKRDAFLTQNPAIEAIYQFQQELHSLL
HHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
MKRALTQRACRKVIPTFLDMLAELKQSTFKALASLGKTLSAWKDEVARMWRFSKSNGITE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
GFHRKMKLIQRRAYGFRNFENYRVRVRVLCG
HHHHHHHHHHHHHHCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
PRKNLILNLPGFSIVKVSGYQPLLLDVRYNRLARCSHCQSKKVRKKASYIRRVHHELIG
CCCCEEEECCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRRSILRFKAYKLYCYACGRYGNQQFPGINKHQRATWRVQAAVFHEHSRGVSQKDLSERY
HHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
KKGKATIERWYQRHYEEQHRELLNKPCPVVLGIDEHFFSKKEGFATTLCDLRKQKVFDVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHH
RGRSEGDLKDYLQQLPGKERVKVICMDLSSTYRSIVKKYFPNAMIVADRFHVIRLIQHQC
CCCCCCCHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH
MMTYRELSSDIKSNRGILALLRTRPDNLTEEKKAKRDAFLTQNPAIEAIYQFQQELHSLL
HHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
MKRALTQRACRKVIPTFLDMLAELKQSTFKALASLGKTLSAWKDEVARMWRFSKSNGITE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
GFHRKMKLIQRRAYGFRNFENYRVRVRVLCG
HHHHHHHHHHHHHHCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]