Click here to switch to the map view.

The map label for this gene is 148360197

Identifier: 148360197

GI number: 148360197

Start: 2837561

End: 2838199

Strand: Reverse

Name: 148360197

Synonym: LPC_2129

Alternate gene names: NA

Gene position: 2838199-2837561 (Counterclockwise)

Preceding gene: 148360196

Following gene: 148360198

Centisome position: 79.36

GC content: 37.4

Gene sequence:

>639_bases
ATGAAGTCATCTGAAATTTGCCCATTTGGCCCTAAATTACAACAATATTGGGATAAGCGATACGATTATTTTCATCGCTT
TGATGAGGGGATTCAAACAGACTCTGAAGGTTTGCATACCGTTATGCCTGAAGATGCTGCGCTCACTCAAGCCAAATTAT
TCAATAATGCGAAGATTGTAGTAGATGGTTTTTGTGGTATTGGCGGGTCGGCTATTGCTCTGGCAAGAACAGGTAAAAAA
GTCATTGCTATCGAAATGGATTCCGTCCGTTTAGCAATGGCTAAAAATAATGCTCGTGTTTATGGTGTTGAACATCTTAT
AACGTTTGTTCATGGAGATTTTTTCGATGTTGCTGCTGAGATAAAAGCTGATGCTGTCCTTATCGACCCGCCATGGGGAT
GGCCTCGTTACAGAAAGATAGAAGAATTTCGTTTGCAGCATTTTAATCCGAATGGAAGTAAATTACTCAGTTATGTGCTT
GATCATTTCAATAAAATTGTATTACGTGCACCAAAAACATTTATCACTTCAGAATTAGATCAATTTAATGTCAACTATGA
GATTCATTCTGATAAGCTTCATCATTCAATCATTTCTATTTCTGTATGCATCACTAACCATTCCAAAAGGAAGTCTTGA

Upstream 100 bases:

>100_bases
AACTCTATTCCATACAAACAACAAGGAAACTCTAAAATTTTCAATCCTCGATTATGCAGGCAGGCTTGCTATATGGGGTG
CACTTTGATACAGGTAAAAA

Downstream 100 bases:

>100_bases
TAGTGTTTTTAAATACCAGATGAGTCCATATCATTGCTTGCTGTCCAACCCAAGTCCCAATAATACTCCCTTCATTATTG
GGGGATTGGTGTACTATACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKSSEICPFGPKLQQYWDKRYDYFHRFDEGIQTDSEGLHTVMPEDAALTQAKLFNNAKIVVDGFCGIGGSAIALARTGKK
VIAIEMDSVRLAMAKNNARVYGVEHLITFVHGDFFDVAAEIKADAVLIDPPWGWPRYRKIEEFRLQHFNPNGSKLLSYVL
DHFNKIVLRAPKTFITSELDQFNVNYEIHSDKLHHSIISISVCITNHSKRKS

Sequences:

>Translated_212_residues
MKSSEICPFGPKLQQYWDKRYDYFHRFDEGIQTDSEGLHTVMPEDAALTQAKLFNNAKIVVDGFCGIGGSAIALARTGKK
VIAIEMDSVRLAMAKNNARVYGVEHLITFVHGDFFDVAAEIKADAVLIDPPWGWPRYRKIEEFRLQHFNPNGSKLLSYVL
DHFNKIVLRAPKTFITSELDQFNVNYEIHSDKLHHSIISISVCITNHSKRKS
>Mature_212_residues
MKSSEICPFGPKLQQYWDKRYDYFHRFDEGIQTDSEGLHTVMPEDAALTQAKLFNNAKIVVDGFCGIGGSAIALARTGKK
VIAIEMDSVRLAMAKNNARVYGVEHLITFVHGDFFDVAAEIKADAVLIDPPWGWPRYRKIEEFRLQHFNPNGSKLLSYVL
DHFNKIVLRAPKTFITSELDQFNVNYEIHSDKLHHSIISISVCITNHSKRKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI151301096, Length=175, Percent_Identity=41.1428571428571, Blast_Score=137, Evalue=7e-33,
Organism=Caenorhabditis elegans, GI193203170, Length=207, Percent_Identity=40.5797101449275, Blast_Score=127, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17508967, Length=207, Percent_Identity=40.5797101449275, Blast_Score=127, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6325100, Length=184, Percent_Identity=29.3478260869565, Blast_Score=71, Evalue=1e-13,
Organism=Drosophila melanogaster, GI221379831, Length=137, Percent_Identity=43.7956204379562, Blast_Score=126, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24141; Mature: 24141

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSEICPFGPKLQQYWDKRYDYFHRFDEGIQTDSEGLHTVMPEDAALTQAKLFNNAKIV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHCCCEEE
VDGFCGIGGSAIALARTGKKVIAIEMDSVRLAMAKNNARVYGVEHLITFVHGDFFDVAAE
EEECCCCCCCEEEEEECCCEEEEEEECCEEEEEECCCCEEEEHHHHHHHHCCCHHHHHHH
IKADAVLIDPPWGWPRYRKIEEFRLQHFNPNGSKLLSYVLDHFNKIVLRAPKTFITSELD
CCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEHCCCHHHHHHHHH
QFNVNYEIHSDKLHHSIISISVCITNHSKRKS
HEECEEEEECCHHHHHEEEEEEEEECCCCCCC
>Mature Secondary Structure
MKSSEICPFGPKLQQYWDKRYDYFHRFDEGIQTDSEGLHTVMPEDAALTQAKLFNNAKIV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHCCCEEE
VDGFCGIGGSAIALARTGKKVIAIEMDSVRLAMAKNNARVYGVEHLITFVHGDFFDVAAE
EEECCCCCCCEEEEEECCCEEEEEEECCEEEEEECCCCEEEEHHHHHHHHCCCHHHHHHH
IKADAVLIDPPWGWPRYRKIEEFRLQHFNPNGSKLLSYVLDHFNKIVLRAPKTFITSELD
CCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEHCCCHHHHHHHHH
QFNVNYEIHSDKLHHSIISISVCITNHSKRKS
HEECEEEEECCHHHHHEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA