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The map label for this gene is tnpA [H]

Identifier: 148360195

GI number: 148360195

Start: 2840523

End: 2841698

Strand: Reverse

Name: tnpA [H]

Synonym: LPC_2127

Alternate gene names: 148360195

Gene position: 2841698-2840523 (Counterclockwise)

Preceding gene: 148360193

Following gene: 148360196

Centisome position: 79.46

GC content: 39.46

Gene sequence:

>1176_bases
ATGCCCAAGAAAAATTGTATCCTAAATTTACCAGGATATTCTATTAAAAAGGTGAGTGGAGAGAACCCGGTTTATATTGA
AGTGAGTTATCGCCGGGTAGTTCGGTGTATTCATTGTGGTAATAAGAAGTTACGTAAAAAAGACAGTTTTATAAGACGCA
TACGTCATGAGTCGATTGGATTAAGACGCAGTTACTTGTGTATCAAGGCTCATAAATATTATTGTCCTGCGTGTGGTCGC
TATTTTAATCAGCGTTTTCCTGGGATAGGCAAGTATCAAAGAGCGAGCGAGAGTTTGCGTAAACAGGTATTTCATTATCA
CAGCAAAGGAGTGAGTCAAAAGGATTTGGCTCGTGATTTAAAGCTGGGTAAGTCGGCTGTAGAGCGCTGGTATCATTATG
GTTATGAGCTTCGCTATAAGAAGATAGCGACACGTTCCTGTCCCCGAGTATTAGGACTTGATGAACATTCATTTAATCGG
AAAGTGGGTTATGCTACAACCTTTTGTGACTTGGCCAAACATAAAATATTTGATGTGGTTGAGGGGCGTTCAGAAAAGGA
TTTAGAAGGTTATCTAAACACATTAGAAGGAAAAGATAAGGTACAGGTAGTCTGTATTGATTTAAGTTCCAGTTATCGCA
AGTTAATCAGGCGTTACTTTCCCAATGCGATGATTGTTGCCGTTCGCTTTCATGTGATACGTTTGTTGAATCAATTCTGT
TTGCAGACTTATCAGCAGATTGACCCTGAAATGAAATATCAGCGAGGTCTCTTGGCGGCATTGAGAACCAATCCCAATAA
CCTCAGTGTAAAACGATTAAATAAACGAGAGCGCTATTTGCAACAACAGCCTGTCATTGCTGCAATATATTACTTTAAAC
AGCGATTACATCGATTACTCATGCGAAAACATCGCACCGCAAAGCAGTGTACGCGTTTAATACCTCTCTTTCTTAAACTG
GTTGCCAGTTTGAAAGAAAGTCCTTTTGAATCACTCAAGACTCTGGGTAGGACATTATATCAATGGCGGGAAGAAGTGGT
TAGAATGTGGCGGTTTACTAAAAACAACGGCATTACTGAAGGGTTCCATCGTAAGATGAAGCTCATTCAACGTCGTGCTT
ATGGATTTAGAAACTTTGAAAATTATAGGTTAGGGGTTAAAGTTTTATGTTCTTGA

Upstream 100 bases:

>100_bases
TTATCGTTTATAAGTTTTGGCTCTACCCCAAATAAGGGGGCATTTTAATCAAGTTAGCATAGACTAACTCTTTGATTTGA
CGGTCAAAAGGAAGATTAAA

Downstream 100 bases:

>100_bases
TTAGTGCTCCCGGATTTGGGGAAGAGCCGATATAATTTGTAACCGATGTCTTCGGAATAGACCTGCATGGAGATTGAGTC
GCCGCAATCGCTTTTCGACT

Product: IS652 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MPKKNCILNLPGYSIKKVSGENPVYIEVSYRRVVRCIHCGNKKLRKKDSFIRRIRHESIGLRRSYLCIKAHKYYCPACGR
YFNQRFPGIGKYQRASESLRKQVFHYHSKGVSQKDLARDLKLGKSAVERWYHYGYELRYKKIATRSCPRVLGLDEHSFNR
KVGYATTFCDLAKHKIFDVVEGRSEKDLEGYLNTLEGKDKVQVVCIDLSSSYRKLIRRYFPNAMIVAVRFHVIRLLNQFC
LQTYQQIDPEMKYQRGLLAALRTNPNNLSVKRLNKRERYLQQQPVIAAIYYFKQRLHRLLMRKHRTAKQCTRLIPLFLKL
VASLKESPFESLKTLGRTLYQWREEVVRMWRFTKNNGITEGFHRKMKLIQRRAYGFRNFENYRLGVKVLCS

Sequences:

>Translated_391_residues
MPKKNCILNLPGYSIKKVSGENPVYIEVSYRRVVRCIHCGNKKLRKKDSFIRRIRHESIGLRRSYLCIKAHKYYCPACGR
YFNQRFPGIGKYQRASESLRKQVFHYHSKGVSQKDLARDLKLGKSAVERWYHYGYELRYKKIATRSCPRVLGLDEHSFNR
KVGYATTFCDLAKHKIFDVVEGRSEKDLEGYLNTLEGKDKVQVVCIDLSSSYRKLIRRYFPNAMIVAVRFHVIRLLNQFC
LQTYQQIDPEMKYQRGLLAALRTNPNNLSVKRLNKRERYLQQQPVIAAIYYFKQRLHRLLMRKHRTAKQCTRLIPLFLKL
VASLKESPFESLKTLGRTLYQWREEVVRMWRFTKNNGITEGFHRKMKLIQRRAYGFRNFENYRLGVKVLCS
>Mature_390_residues
PKKNCILNLPGYSIKKVSGENPVYIEVSYRRVVRCIHCGNKKLRKKDSFIRRIRHESIGLRRSYLCIKAHKYYCPACGRY
FNQRFPGIGKYQRASESLRKQVFHYHSKGVSQKDLARDLKLGKSAVERWYHYGYELRYKKIATRSCPRVLGLDEHSFNRK
VGYATTFCDLAKHKIFDVVEGRSEKDLEGYLNTLEGKDKVQVVCIDLSSSYRKLIRRYFPNAMIVAVRFHVIRLLNQFCL
QTYQQIDPEMKYQRGLLAALRTNPNNLSVKRLNKRERYLQQQPVIAAIYYFKQRLHRLLMRKHRTAKQCTRLIPLFLKLV
ASLKESPFESLKTLGRTLYQWREEVVRMWRFTKNNGITEGFHRKMKLIQRRAYGFRNFENYRLGVKVLCS

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 46489; Mature: 46358

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKKNCILNLPGYSIKKVSGENPVYIEVSYRRVVRCIHCGNKKLRKKDSFIRRIRHESIG
CCCCCEEEECCCCCEEEECCCCCEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
LRRSYLCIKAHKYYCPACGRYFNQRFPGIGKYQRASESLRKQVFHYHSKGVSQKDLARDL
CHHHHEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KLGKSAVERWYHYGYELRYKKIATRSCPRVLGLDEHSFNRKVGYATTFCDLAKHKIFDVV
HHHHHHHHHHHHCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
EGRSEKDLEGYLNTLEGKDKVQVVCIDLSSSYRKLIRRYFPNAMIVAVRFHVIRLLNQFC
CCCCCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LQTYQQIDPEMKYQRGLLAALRTNPNNLSVKRLNKRERYLQQQPVIAAIYYFKQRLHRLL
HHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MRKHRTAKQCTRLIPLFLKLVASLKESPFESLKTLGRTLYQWREEVVRMWRFTKNNGITE
HHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
GFHRKMKLIQRRAYGFRNFENYRLGVKVLCS
HHHHHHHHHHHHHHCCCCCCCCCCCEEEECC
>Mature Secondary Structure 
PKKNCILNLPGYSIKKVSGENPVYIEVSYRRVVRCIHCGNKKLRKKDSFIRRIRHESIG
CCCCEEEECCCCCEEEECCCCCEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
LRRSYLCIKAHKYYCPACGRYFNQRFPGIGKYQRASESLRKQVFHYHSKGVSQKDLARDL
CHHHHEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KLGKSAVERWYHYGYELRYKKIATRSCPRVLGLDEHSFNRKVGYATTFCDLAKHKIFDVV
HHHHHHHHHHHHCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
EGRSEKDLEGYLNTLEGKDKVQVVCIDLSSSYRKLIRRYFPNAMIVAVRFHVIRLLNQFC
CCCCCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LQTYQQIDPEMKYQRGLLAALRTNPNNLSVKRLNKRERYLQQQPVIAAIYYFKQRLHRLL
HHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MRKHRTAKQCTRLIPLFLKLVASLKESPFESLKTLGRTLYQWREEVVRMWRFTKNNGITE
HHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
GFHRKMKLIQRRAYGFRNFENYRLGVKVLCS
HHHHHHHHHHHHHHCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]