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The map label for this gene is 148360173

Identifier: 148360173

GI number: 148360173

Start: 2861148

End: 2861864

Strand: Reverse

Name: 148360173

Synonym: LPC_2104

Alternate gene names: NA

Gene position: 2861864-2861148 (Counterclockwise)

Preceding gene: 148360163

Following gene: 148360175

Centisome position: 80.02

GC content: 40.86

Gene sequence:

>717_bases
ATGGAATTTTTACGCCGCAACAGAGTGGGGCTCGTAATAATAGCGATCTTGACCTGTCTTTTTTTGATTTTAATTCCAAA
ACAATTGTCAAAAAAATCTAAAATTGTCTCACAAACTCCGTTTCTGATTGAAATAAAATTACCAGATCCAGCTTACTCGA
GCCCCATTTCAATTGAAGAAGCGCTTAAAAAACGCCGCTCTATCAGGCAGTATAAAAATCAGCCCATAACTCTTCAGCAA
GCTTCTCAGCTACTTTGGGCAGCGCAAGGAATAACCTCTGATACGGGTTTGCGAACAGCACCTTCAGCAGGAGCGTGCTA
TCCATTGGAGCTTTATTTTATTGCAAGTAATGTTAGCAATTTATCACCTGGTGTTTATCATTATGAACCAACAAAGCATA
CACTAAAACAATTAAAGGCAGAGGATATCTCTTCACAATTAGCTCAAGCCGCGTTAGGGCAGCAGGCAGTAAAATCGAGC
GCTGCAAATATTGTGATCACAGCCGTTTTTTCTCGAATGACCAAAAAATACGGTAAAATAGGGAGGCGTTTTGCTTTAAT
GGAGGCAGGGCATGTTGCTCAAAATATTTACCTTCAATCGGTGTCTCTCAACCTGGCTACTGTATCAATAGGTGCGTTCG
ATATTACTCAAGTCAGGGAGTCTCTGGGTATTAAAGACATGGAGCCTGTATATATTCTGCCGGTAGGAGCAAAATGA

Upstream 100 bases:

>100_bases
CATACAGAATAAAGGGTTCTATTGAATATCAAAATCCAGGAGAAAAACGGTACAAAAAATAAATATCTTATTTTGGGAGT
TATTACCAGGGGGATAGTAA

Downstream 100 bases:

>100_bases
AAAATATAAATTATAAAGGTAAGATTTTCTAATGATTTAACAATCAAACCGTTTGCAGAGAAGAGTTATGGGAAACTTTG
TCTCTGAAAAATCGAAGAGA

Product: putative nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MEFLRRNRVGLVIIAILTCLFLILIPKQLSKKSKIVSQTPFLIEIKLPDPAYSSPISIEEALKKRRSIRQYKNQPITLQQ
ASQLLWAAQGITSDTGLRTAPSAGACYPLELYFIASNVSNLSPGVYHYEPTKHTLKQLKAEDISSQLAQAALGQQAVKSS
AANIVITAVFSRMTKKYGKIGRRFALMEAGHVAQNIYLQSVSLNLATVSIGAFDITQVRESLGIKDMEPVYILPVGAK

Sequences:

>Translated_238_residues
MEFLRRNRVGLVIIAILTCLFLILIPKQLSKKSKIVSQTPFLIEIKLPDPAYSSPISIEEALKKRRSIRQYKNQPITLQQ
ASQLLWAAQGITSDTGLRTAPSAGACYPLELYFIASNVSNLSPGVYHYEPTKHTLKQLKAEDISSQLAQAALGQQAVKSS
AANIVITAVFSRMTKKYGKIGRRFALMEAGHVAQNIYLQSVSLNLATVSIGAFDITQVRESLGIKDMEPVYILPVGAK
>Mature_238_residues
MEFLRRNRVGLVIIAILTCLFLILIPKQLSKKSKIVSQTPFLIEIKLPDPAYSSPISIEEALKKRRSIRQYKNQPITLQQ
ASQLLWAAQGITSDTGLRTAPSAGACYPLELYFIASNVSNLSPGVYHYEPTKHTLKQLKAEDISSQLAQAALGQQAVKSS
AANIVITAVFSRMTKKYGKIGRRFALMEAGHVAQNIYLQSVSLNLATVSIGAFDITQVRESLGIKDMEPVYILPVGAK

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415
- InterPro:   IPR020051 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 26189; Mature: 26189

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLRRNRVGLVIIAILTCLFLILIPKQLSKKSKIVSQTPFLIEIKLPDPAYSSPISIEE
CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHH
ALKKRRSIRQYKNQPITLQQASQLLWAAQGITSDTGLRTAPSAGACYPLELYFIASNVSN
HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
LSPGVYHYEPTKHTLKQLKAEDISSQLAQAALGQQAVKSSAANIVITAVFSRMTKKYGKI
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GRRFALMEAGHVAQNIYLQSVSLNLATVSIGAFDITQVRESLGIKDMEPVYILPVGAK
HHHHHHHHHHHHHHHHEEEEEEEEEEEEEECHHHHHHHHHHCCCCCCCCEEEEECCCC
>Mature Secondary Structure
MEFLRRNRVGLVIIAILTCLFLILIPKQLSKKSKIVSQTPFLIEIKLPDPAYSSPISIEE
CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHH
ALKKRRSIRQYKNQPITLQQASQLLWAAQGITSDTGLRTAPSAGACYPLELYFIASNVSN
HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
LSPGVYHYEPTKHTLKQLKAEDISSQLAQAALGQQAVKSSAANIVITAVFSRMTKKYGKI
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GRRFALMEAGHVAQNIYLQSVSLNLATVSIGAFDITQVRESLGIKDMEPVYILPVGAK
HHHHHHHHHHHHHHHHEEEEEEEEEEEEEECHHHHHHHHHHCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]