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The map label for this gene is vhtD

Identifier: 148360081

GI number: 148360081

Start: 2957714

End: 2958193

Strand: Reverse

Name: vhtD

Synonym: LPC_2012

Alternate gene names: NA

Gene position: 2958193-2957714 (Counterclockwise)

Preceding gene: 148360080

Following gene: 148360085

Centisome position: 82.71

GC content: 37.29

Gene sequence:

>480_bases
ATGAATCTTATAAAAATATTAGGCATAGGCTCACCTTTTGGTGATGATCAAGTGGGATGTTTGGCTGCCGATTGTCTTAA
GACAGAATTGTCCAAAGATCAATACATTAGTAAACTGGTGAGCATAGAGTCTCACGATCGACCTGGTCTTCGTTTGATTG
AATTGATGAATCCAGCCAAAGTCGTTTTTTTAATTGATGCTGTAAAGTCCGGATGCGCCCTAGGTACAATCCATCGCTTA
AAAAATAAAGAGATTTATGCATTTCAAAACAGGTTATCGACCCATGAAATGGGGGTGGCTCAAGCTCTTCAATTAGGCCA
TAGCCTTAATGCTCTGCCAGAACATATTATTTTATATGGGATTGAAATTGATAACATCGCTTTTAATGCGATGCTGTCTA
AACCAGTTGAAAAAGCAATGAGAGCAGTTGTTATCCAAATAAAAAAAGAGATTGATGAAGCACTAAAGCTTATGACATAA

Upstream 100 bases:

>100_bases
AGGAAGAAGCAATCAGGTATTTTAGTGAGATGATCATTCGTAATTATGATCCGTGTATTTCATGCTCTACACATTTTCTG
AATTTAAAAATCGATAGAAT

Downstream 100 bases:

>100_bases
GTTTCTTTATGCCTTAGGCGGTCTTCTCAATTGATATCTTAAAGAAATCGTTTCTTAATTTAAAGCGCCAAAGGTTTTAC
TTCTCCACCATACTGCATCG

Product: hydrogenase expression/formation protein

Products: NA

Alternate protein names: Hydrogenase Expression/Formation Protein; Peptidase; VhtD Hydrogenase Expression/Formation Protein

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MNLIKILGIGSPFGDDQVGCLAADCLKTELSKDQYISKLVSIESHDRPGLRLIELMNPAKVVFLIDAVKSGCALGTIHRL
KNKEIYAFQNRLSTHEMGVAQALQLGHSLNALPEHIILYGIEIDNIAFNAMLSKPVEKAMRAVVIQIKKEIDEALKLMT

Sequences:

>Translated_159_residues
MNLIKILGIGSPFGDDQVGCLAADCLKTELSKDQYISKLVSIESHDRPGLRLIELMNPAKVVFLIDAVKSGCALGTIHRL
KNKEIYAFQNRLSTHEMGVAQALQLGHSLNALPEHIILYGIEIDNIAFNAMLSKPVEKAMRAVVIQIKKEIDEALKLMT
>Mature_159_residues
MNLIKILGIGSPFGDDQVGCLAADCLKTELSKDQYISKLVSIESHDRPGLRLIELMNPAKVVFLIDAVKSGCALGTIHRL
KNKEIYAFQNRLSTHEMGVAQALQLGHSLNALPEHIILYGIEIDNIAFNAMLSKPVEKAMRAVVIQIKKEIDEALKLMT

Specific function: Unknown

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17537; Mature: 17537

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIKILGIGSPFGDDQVGCLAADCLKTELSKDQYISKLVSIESHDRPGLRLIELMNPAK
CCEEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEECCCCHH
VVFLIDAVKSGCALGTIHRLKNKEIYAFQNRLSTHEMGVAQALQLGHSLNALPEHIILYG
EEEEEEHHHCCCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHCCCCEEEEEE
IEIDNIAFNAMLSKPVEKAMRAVVIQIKKEIDEALKLMT
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLIKILGIGSPFGDDQVGCLAADCLKTELSKDQYISKLVSIESHDRPGLRLIELMNPAK
CCEEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEECCCCHH
VVFLIDAVKSGCALGTIHRLKNKEIYAFQNRLSTHEMGVAQALQLGHSLNALPEHIILYG
EEEEEEHHHCCCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHCCCCEEEEEE
IEIDNIAFNAMLSKPVEKAMRAVVIQIKKEIDEALKLMT
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA