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The map label for this gene is yfdH [C]

Identifier: 148360069

GI number: 148360069

Start: 2968862

End: 2969821

Strand: Direct

Name: yfdH [C]

Synonym: LPC_2000

Alternate gene names: 148360069

Gene position: 2968862-2969821 (Clockwise)

Preceding gene: 148360082

Following gene: 148360068

Centisome position: 83.01

GC content: 40.21

Gene sequence:

>960_bases
ATGTCTAAAACTGCAAAACATAAAAAACTTATCTCTTGTGTTGTTCCTGTTTTTAACGAGGAAGTACTTATTGCTGAATT
CATCGCCGCATTGGATAAAACTCTTAAGAGCATCTCTTATCCCTATGAAATTCTACTGATAGATGATGGAAGCCAAGATA
ATACTTTCGCAATCATTCAAACATTAAGAAAAGAATATTCTCTTCGTTGTATTCGTTTCAGTAGAAATTTCGGCAAGGAA
AAAGCGCTCAGTGCAGGATTGGATCATGCACGCGGAGATGCTGTGATCTTATTGGATAGTGATTTCCAACACCCGCTTGA
ATTATTAAGCGAATTTATCGCCAAATGGGAAGACGGTTATGACATGGTTTATGCCGTGAGACAAAATCGTTCTGACGAAT
CATGGCTAAAACGAGTTTGCGCTAAAATTTTTTATCATCTCACTTCCAAAATAAACCGTATTAATATCCCGGCAAATGCA
GGTGACTTTAGATTGCTCGATAGAAAAATTGTTAATGCACTACAAACCCTTCCCGAACGTAATCGCTTTATGAAGGGTTT
ATACAGCTGGGTCGGTTTTAAACAAATAGCCGTGCCATTTAATGTACACCCCCGTAAATCGGGTAGTTCGCAATGGAGTT
TTTATTCTTTACTGGATTTGGCAATTACTGGCATAACATCGTTTACTGCTTTTCCTCTAAGAATGATTTCCCTGGGAGGA
ATGGGGGTAGCAGCCCTGGCGCTTATTTATGCCGCCTGGATTGTATTAAGCACGCTAATCTTTGGCATTGAAACCCCTGG
CTGGGCAACCCTAGTCACTGCAATCAGCTTTTTTGGCGGACTGCAATTATTTGCTATAGGTGTAGTTGGCGAATACATAG
GTCGTGTTTTTGATGAAGTGAAACACAGACCCCACTACATTATCGATGAGGAGTCCAGTTTTGATGACCACTGCTCTTAA

Upstream 100 bases:

>100_bases
AATACTTTCACTGTATTTATAACCCTCAATGGACTCAACTTCCAAGAGTAGGTTAACATATGAAGCTATCTATCTTTTGT
CTGGTACATTAATACTCATT

Downstream 100 bases:

>100_bases
ATTATCCCATCGATTAATTTATTTTACTGGAGTAGGGCTCTGCGCTGCTGTCGTACATCTTTTGATCGTGTTCAATTTAG
TGAATTTTCTAAATCTTCAA

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSKTAKHKKLISCVVPVFNEEVLIAEFIAALDKTLKSISYPYEILLIDDGSQDNTFAIIQTLRKEYSLRCIRFSRNFGKE
KALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQNRSDESWLKRVCAKIFYHLTSKINRINIPANA
GDFRLLDRKIVNALQTLPERNRFMKGLYSWVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMISLGG
MGVAALALIYAAWIVLSTLIFGIETPGWATLVTAISFFGGLQLFAIGVVGEYIGRVFDEVKHRPHYIIDEESSFDDHCS

Sequences:

>Translated_319_residues
MSKTAKHKKLISCVVPVFNEEVLIAEFIAALDKTLKSISYPYEILLIDDGSQDNTFAIIQTLRKEYSLRCIRFSRNFGKE
KALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQNRSDESWLKRVCAKIFYHLTSKINRINIPANA
GDFRLLDRKIVNALQTLPERNRFMKGLYSWVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMISLGG
MGVAALALIYAAWIVLSTLIFGIETPGWATLVTAISFFGGLQLFAIGVVGEYIGRVFDEVKHRPHYIIDEESSFDDHCS
>Mature_318_residues
SKTAKHKKLISCVVPVFNEEVLIAEFIAALDKTLKSISYPYEILLIDDGSQDNTFAIIQTLRKEYSLRCIRFSRNFGKEK
ALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGYDMVYAVRQNRSDESWLKRVCAKIFYHLTSKINRINIPANAG
DFRLLDRKIVNALQTLPERNRFMKGLYSWVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMISLGGM
GVAALALIYAAWIVLSTLIFGIETPGWATLVTAISFFGGLQLFAIGVVGEYIGRVFDEVKHRPHYIIDEESSFDDHCS

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=171, Percent_Identity=29.8245614035088, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1788692, Length=299, Percent_Identity=47.8260869565217, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI1788588, Length=309, Percent_Identity=35.2750809061489, Blast_Score=184, Evalue=5e-48,
Organism=Drosophila melanogaster, GI24585265, Length=176, Percent_Identity=28.4090909090909, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 36004; Mature: 35873

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTAKHKKLISCVVPVFNEEVLIAEFIAALDKTLKSISYPYEILLIDDGSQDNTFAIIQ
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH
TLRKEYSLRCIRFSRNFGKEKALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGY
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCC
DMVYAVRQNRSDESWLKRVCAKIFYHLTSKINRINIPANAGDFRLLDRKIVNALQTLPER
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCHHH
NRFMKGLYSWVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMISLGG
HHHHHHHHHHHCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MGVAALALIYAAWIVLSTLIFGIETPGWATLVTAISFFGGLQLFAIGVVGEYIGRVFDEV
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHRPHYIIDEESSFDDHCS
CCCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
SKTAKHKKLISCVVPVFNEEVLIAEFIAALDKTLKSISYPYEILLIDDGSQDNTFAIIQ
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH
TLRKEYSLRCIRFSRNFGKEKALSAGLDHARGDAVILLDSDFQHPLELLSEFIAKWEDGY
HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCC
DMVYAVRQNRSDESWLKRVCAKIFYHLTSKINRINIPANAGDFRLLDRKIVNALQTLPER
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCHHH
NRFMKGLYSWVGFKQIAVPFNVHPRKSGSSQWSFYSLLDLAITGITSFTAFPLRMISLGG
HHHHHHHHHHHCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MGVAALALIYAAWIVLSTLIFGIETPGWATLVTAISFFGGLQLFAIGVVGEYIGRVFDEV
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHRPHYIIDEESSFDDHCS
CCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]