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The map label for this gene is sdeD

Identifier: 148360030

GI number: 148360030

Start: 3008018

End: 3009166

Strand: Reverse

Name: sdeD

Synonym: LPC_1961

Alternate gene names: NA

Gene position: 3009166-3008018 (Counterclockwise)

Preceding gene: 148360027

Following gene: 148360031

Centisome position: 84.14

GC content: 42.38

Gene sequence:

>1149_bases
GTGCCTATTATTCTAGATTCTGATGTGTTGGAAGTGGCGGAATATGTGTATAAAACACGCCTATCTCAGCCTTACACTGA
AGTCGGTTCTGAATGGGAGTATAATTACAAAAAGCCAACAGCTACCTATGCAAAAGGCGATGGTCATAATTTGCAAAGGT
ACATTACGATTGATGGCAAGCAGCTTCATCGCCCTATCCATGGCTTAGCCCATACGATGCGCACATTGATGTATAGCCAA
TTGATGCATTGCTCCTCAAAAAAACAACTTTTCCCACACGTATGCCAGGACGGACGAACAATAGCCGATCTCAGTGAACT
TGATCTTAAAAAGATAAACATCGCGCAGTTATTTTTTGTAGCCGGGCGCGAAAGCGAGGCTTCTTATGGTGATGCTTATC
ATCGTTATCATCTGTATGGGGCTAAACAGTTCGAAGAATATGCTCGCAAGCATTTGACTCATCTTTTCTCAGAAGAAGAA
ATCCAATTGTACTCACGATGTATAGAAGACAGGGTAGGTGACAGTTTTGATGGTACCCCTGAAGGTTATATAATTCACTT
GTCACACATGATCGATTTGATGCGCTGTAAAAGCCCGGTTGAAGTTTTTTTGGGGCACTCAAAAGGGGTTTCTGGTATTG
TACCTACATTGATTCACTTGTTTGGCAAACAAGATGGCTTGGATATTATGCATTACGCGCGAGGCTTGTTTGCGGCTACA
GGTGAAGCAGTACCCTATATTGATTCATCTGAATGGCCTCATTTGGGAGTTGATTTGAGTCGGGTACAACGTGCTCTCTC
TATCGTTGGTGATATCAATGTCCCTGGGCAAGAGGCGGATCCTAAAAAAACAGCGCAAGCCGGTTTTTCAGTGGATGGTT
GTTATTCCGCGTTAACCAGTGTGCCTACACCTTCCTGGTATGAGAAAGAGTTAAAAGAAGTCGATGATGAAAAAATCGAT
GTTAAGGAAGTTGATGATAGGGAGATAGAAAAAGAACATGAGATAGTTGTTCCTTCGCAGGCAACAACACCTTTAAGTAC
AGAAAAACCCGGCTCTTTTGTCGAAAAATTTCTGAAGCCATTTATGATTTGGAAAAAGCCAGAGTTACAAACGACTCAGC
CAACAACGGAGAAGACTAACAGACCTTAA

Upstream 100 bases:

>100_bases
ATCATTGCGGTTTTTTGCTTTATACCTATTGCAATGAATTGATAAATAATTAAACTTGTTATATAATAAATCCTCATTTT
GTTTATGGAAGGAGACCATT

Downstream 100 bases:

>100_bases
CCTGTTTTACTTAAAGTAGTTAGAGAAACGAATTCTCCTAGGGAATTAAAACGCACTGAGGTGTTGTAACTATGTTTAGT
TATCTGGATAAATTATTAGA

Product: Dot/Icm system substrate protein SdeD

Products: NA

Alternate protein names: Sid Related Protein-Like; Sid -Like Protein; SdeC Protein; Sid Proteins; SdeA Protein; SidE Protein

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MPIILDSDVLEVAEYVYKTRLSQPYTEVGSEWEYNYKKPTATYAKGDGHNLQRYITIDGKQLHRPIHGLAHTMRTLMYSQ
LMHCSSKKQLFPHVCQDGRTIADLSELDLKKINIAQLFFVAGRESEASYGDAYHRYHLYGAKQFEEYARKHLTHLFSEEE
IQLYSRCIEDRVGDSFDGTPEGYIIHLSHMIDLMRCKSPVEVFLGHSKGVSGIVPTLIHLFGKQDGLDIMHYARGLFAAT
GEAVPYIDSSEWPHLGVDLSRVQRALSIVGDINVPGQEADPKKTAQAGFSVDGCYSALTSVPTPSWYEKELKEVDDEKID
VKEVDDREIEKEHEIVVPSQATTPLSTEKPGSFVEKFLKPFMIWKKPELQTTQPTTEKTNRP

Sequences:

>Translated_382_residues
MPIILDSDVLEVAEYVYKTRLSQPYTEVGSEWEYNYKKPTATYAKGDGHNLQRYITIDGKQLHRPIHGLAHTMRTLMYSQ
LMHCSSKKQLFPHVCQDGRTIADLSELDLKKINIAQLFFVAGRESEASYGDAYHRYHLYGAKQFEEYARKHLTHLFSEEE
IQLYSRCIEDRVGDSFDGTPEGYIIHLSHMIDLMRCKSPVEVFLGHSKGVSGIVPTLIHLFGKQDGLDIMHYARGLFAAT
GEAVPYIDSSEWPHLGVDLSRVQRALSIVGDINVPGQEADPKKTAQAGFSVDGCYSALTSVPTPSWYEKELKEVDDEKID
VKEVDDREIEKEHEIVVPSQATTPLSTEKPGSFVEKFLKPFMIWKKPELQTTQPTTEKTNRP
>Mature_381_residues
PIILDSDVLEVAEYVYKTRLSQPYTEVGSEWEYNYKKPTATYAKGDGHNLQRYITIDGKQLHRPIHGLAHTMRTLMYSQL
MHCSSKKQLFPHVCQDGRTIADLSELDLKKINIAQLFFVAGRESEASYGDAYHRYHLYGAKQFEEYARKHLTHLFSEEEI
QLYSRCIEDRVGDSFDGTPEGYIIHLSHMIDLMRCKSPVEVFLGHSKGVSGIVPTLIHLFGKQDGLDIMHYARGLFAATG
EAVPYIDSSEWPHLGVDLSRVQRALSIVGDINVPGQEADPKKTAQAGFSVDGCYSALTSVPTPSWYEKELKEVDDEKIDV
KEVDDREIEKEHEIVVPSQATTPLSTEKPGSFVEKFLKPFMIWKKPELQTTQPTTEKTNRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43386; Mature: 43254

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIILDSDVLEVAEYVYKTRLSQPYTEVGSEWEYNYKKPTATYAKGDGHNLQRYITIDGK
CCEEECCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCEEEEEECHH
QLHRPIHGLAHTMRTLMYSQLMHCSSKKQLFPHVCQDGRTIADLSELDLKKINIAQLFFV
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEHHHHHHHHHHCCHHHEEEE
AGRESEASYGDAYHRYHLYGAKQFEEYARKHLTHLFSEEEIQLYSRCIEDRVGDSFDGTP
ECCCCCCCCCCHHHHEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCC
EGYIIHLSHMIDLMRCKSPVEVFLGHSKGVSGIVPTLIHLFGKQDGLDIMHYARGLFAAT
CCEEEEHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
GEAVPYIDSSEWPHLGVDLSRVQRALSIVGDINVPGQEADPKKTAQAGFSVDGCYSALTS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHC
VPTPSWYEKELKEVDDEKIDVKEVDDREIEKEHEIVVPSQATTPLSTEKPGSFVEKFLKP
CCCCHHHHHHHHHCCCCCCCHHCCCCHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHH
FMIWKKPELQTTQPTTEKTNRP
HHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PIILDSDVLEVAEYVYKTRLSQPYTEVGSEWEYNYKKPTATYAKGDGHNLQRYITIDGK
CEEECCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCEEEEEECHH
QLHRPIHGLAHTMRTLMYSQLMHCSSKKQLFPHVCQDGRTIADLSELDLKKINIAQLFFV
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEHHHHHHHHHHCCHHHEEEE
AGRESEASYGDAYHRYHLYGAKQFEEYARKHLTHLFSEEEIQLYSRCIEDRVGDSFDGTP
ECCCCCCCCCCHHHHEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCC
EGYIIHLSHMIDLMRCKSPVEVFLGHSKGVSGIVPTLIHLFGKQDGLDIMHYARGLFAAT
CCEEEEHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
GEAVPYIDSSEWPHLGVDLSRVQRALSIVGDINVPGQEADPKKTAQAGFSVDGCYSALTS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHC
VPTPSWYEKELKEVDDEKIDVKEVDDREIEKEHEIVVPSQATTPLSTEKPGSFVEKFLKP
CCCCHHHHHHHHHCCCCCCCHHCCCCHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHH
FMIWKKPELQTTQPTTEKTNRP
HHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA