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The map label for this gene is 148360017

Identifier: 148360017

GI number: 148360017

Start: 3025958

End: 3027151

Strand: Reverse

Name: 148360017

Synonym: LPC_1948

Alternate gene names: NA

Gene position: 3027151-3025958 (Counterclockwise)

Preceding gene: 148360015

Following gene: 148360019

Centisome position: 84.64

GC content: 38.19

Gene sequence:

>1194_bases
ATGGCAAGCATAAGTAATTTATGTCATAAAACGCATTTATTTAACATTGTGATGAATTATCTCATGAAAGAAAAATACAT
TGGACTTCATAAGTTTGAGCTAGATACCCCATGTCTTGTGATTGATTATGAAAAACTGAAACATAATTTAGAAATAATGC
AACAACATGGCTTCACATGGGGCATAGGAATAAGGCCACATTGTAAAACTCACAAATGTACTCAAATCGCACGTTTACAA
CTTGAATATGGGGCAATAGGGATTTCTGCCGCCAAACTATCAGAGGCCGCAGCATTGGTATCCAAACGAATCACGAATGT
CTTAATCACTTCACTCATTGTATCGGAGGCCAAGTATTCAAGATTATTCAATTGTCTTAAATCAGCGCCTGATTTAATGC
TGGTTGTAGATGACAAGGATAATATTCGCATGCTTAATAAGCTCGGAAAGTCGCTAAACCAGCCAGTTCATGTCTTGCTT
GATATCGATTCAGGCATTGGCCGAACAGGCATAAATCCCGAGGCAGCATTGGAATATGGTCATTTTATCAATGGGATGAA
TTGGCTTAAGCTAAAAGGAATTCAATGTTATGCAGGCCACTTACAACACATTCAAAACTATGAAGAGAGAAAAGCATTCT
CTCTACAGGTTATGGAAATGGCCAGCAGGATTGTTAAGAGTTTTAGAGATGCCAACCTTCCTTGTGAAATATTAACTGGC
ACCGGAACTGGTACTTTTGATATTGATGTCGAAGCAAGTGAAGTAACAGAAATACAGCCTGGCTCATATGCTGTAATGGA
TGTAGAGTATGGTTCAATTGGTTCAAAAAATAACCCATCAAGCTTTCAGCTATTTAAAAACTCGATGACTCTTTTAACGA
GCGTGATAAGCAGTAATCGTAGAGAGCATGCCACTGTTGATGCAGGAACGAAATCGATTTATGTCGATCCTCATCATAAA
CCACATATTATTAGTCATCCCGGACTGGTTTATGATTGGGGTGGGTTTGGAGATGAGCATGGCAAGGTATTTTCTTGCGA
AGGCGGAAGTCATTTCCTGCAAAATGGCGATGTTTTAGAGATTATCGTTCCTCATTGTGATCCGACAATAAACTTGTATG
ATAAGTTTTATATCACAGAAAATAATGTTGTTGTCGATATTTGGGATATCGACATGCGTGGAAAATCACAATAA

Upstream 100 bases:

>100_bases
TCAAACATAGGTTAGTAAATTACTACCTTTTCAGGCTTTATTAACACTTGTTGGGGGTAAATGCCTAACGCCTCAAGTGA
TCTAAATAAAGATTTAAATT

Downstream 100 bases:

>100_bases
TCTATACTATACAACCAGGTGTTTGAGCTTCATATTTCTGCTAAACAGGAGGAGGGCCACGACGTCCGAGTAATCCCATA
ATAAGAAATATGACAAACAT

Product: metal-activated pyridoxal enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MASISNLCHKTHLFNIVMNYLMKEKYIGLHKFELDTPCLVIDYEKLKHNLEIMQQHGFTWGIGIRPHCKTHKCTQIARLQ
LEYGAIGISAAKLSEAAALVSKRITNVLITSLIVSEAKYSRLFNCLKSAPDLMLVVDDKDNIRMLNKLGKSLNQPVHVLL
DIDSGIGRTGINPEAALEYGHFINGMNWLKLKGIQCYAGHLQHIQNYEERKAFSLQVMEMASRIVKSFRDANLPCEILTG
TGTGTFDIDVEASEVTEIQPGSYAVMDVEYGSIGSKNNPSSFQLFKNSMTLLTSVISSNRREHATVDAGTKSIYVDPHHK
PHIISHPGLVYDWGGFGDEHGKVFSCEGGSHFLQNGDVLEIIVPHCDPTINLYDKFYITENNVVVDIWDIDMRGKSQ

Sequences:

>Translated_397_residues
MASISNLCHKTHLFNIVMNYLMKEKYIGLHKFELDTPCLVIDYEKLKHNLEIMQQHGFTWGIGIRPHCKTHKCTQIARLQ
LEYGAIGISAAKLSEAAALVSKRITNVLITSLIVSEAKYSRLFNCLKSAPDLMLVVDDKDNIRMLNKLGKSLNQPVHVLL
DIDSGIGRTGINPEAALEYGHFINGMNWLKLKGIQCYAGHLQHIQNYEERKAFSLQVMEMASRIVKSFRDANLPCEILTG
TGTGTFDIDVEASEVTEIQPGSYAVMDVEYGSIGSKNNPSSFQLFKNSMTLLTSVISSNRREHATVDAGTKSIYVDPHHK
PHIISHPGLVYDWGGFGDEHGKVFSCEGGSHFLQNGDVLEIIVPHCDPTINLYDKFYITENNVVVDIWDIDMRGKSQ
>Mature_396_residues
ASISNLCHKTHLFNIVMNYLMKEKYIGLHKFELDTPCLVIDYEKLKHNLEIMQQHGFTWGIGIRPHCKTHKCTQIARLQL
EYGAIGISAAKLSEAAALVSKRITNVLITSLIVSEAKYSRLFNCLKSAPDLMLVVDDKDNIRMLNKLGKSLNQPVHVLLD
IDSGIGRTGINPEAALEYGHFINGMNWLKLKGIQCYAGHLQHIQNYEERKAFSLQVMEMASRIVKSFRDANLPCEILTGT
GTGTFDIDVEASEVTEIQPGSYAVMDVEYGSIGSKNNPSSFQLFKNSMTLLTSVISSNRREHATVDAGTKSIYVDPHHKP
HIISHPGLVYDWGGFGDEHGKVFSCEGGSHFLQNGDVLEIIVPHCDPTINLYDKFYITENNVVVDIWDIDMRGKSQ

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 44440; Mature: 44308

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASISNLCHKTHLFNIVMNYLMKEKYIGLHKFELDTPCLVIDYEKLKHNLEIMQQHGFTW
CCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEHHHHHHHHHHHHHCCCEE
GIGIRPHCKTHKCTQIARLQLEYGAIGISAAKLSEAAALVSKRITNVLITSLIVSEAKYS
ECCCCCCCCCCHHHHHHHEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLFNCLKSAPDLMLVVDDKDNIRMLNKLGKSLNQPVHVLLDIDSGIGRTGINPEAALEYG
HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHH
HFINGMNWLKLKGIQCYAGHLQHIQNYEERKAFSLQVMEMASRIVKSFRDANLPCEILTG
HHHCCCCEEEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
TGTGTFDIDVEASEVTEIQPGSYAVMDVEYGSIGSKNNPSSFQLFKNSMTLLTSVISSNR
CCCCEEEEEEEHHHHCEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
REHATVDAGTKSIYVDPHHKPHIISHPGLVYDWGGFGDEHGKVFSCEGGSHFLQNGDVLE
CCCCEEECCCEEEEECCCCCCEEECCCCEEEECCCCCCCCCEEEEECCCCHHHCCCCEEE
IIVPHCDPTINLYDKFYITENNVVVDIWDIDMRGKSQ
EEECCCCCCEEEEEEEEEECCCEEEEEEEECCCCCCC
>Mature Secondary Structure 
ASISNLCHKTHLFNIVMNYLMKEKYIGLHKFELDTPCLVIDYEKLKHNLEIMQQHGFTW
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEHHHHHHHHHHHHHCCCEE
GIGIRPHCKTHKCTQIARLQLEYGAIGISAAKLSEAAALVSKRITNVLITSLIVSEAKYS
ECCCCCCCCCCHHHHHHHEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLFNCLKSAPDLMLVVDDKDNIRMLNKLGKSLNQPVHVLLDIDSGIGRTGINPEAALEYG
HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHH
HFINGMNWLKLKGIQCYAGHLQHIQNYEERKAFSLQVMEMASRIVKSFRDANLPCEILTG
HHHCCCCEEEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
TGTGTFDIDVEASEVTEIQPGSYAVMDVEYGSIGSKNNPSSFQLFKNSMTLLTSVISSNR
CCCCEEEEEEEHHHHCEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
REHATVDAGTKSIYVDPHHKPHIISHPGLVYDWGGFGDEHGKVFSCEGGSHFLQNGDVLE
CCCCEEECCCEEEEECCCCCCEEECCCCEEEECCCCCCCCCEEEEECCCCHHHCCCCEEE
IIVPHCDPTINLYDKFYITENNVVVDIWDIDMRGKSQ
EEECCCCCCEEEEEEEEEECCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]