Click here to switch to the map view.

The map label for this gene is 148359996

Identifier: 148359996

GI number: 148359996

Start: 3047140

End: 3047565

Strand: Reverse

Name: 148359996

Synonym: LPC_1926

Alternate gene names: NA

Gene position: 3047565-3047140 (Counterclockwise)

Preceding gene: 148359995

Following gene: 148359997

Centisome position: 85.21

GC content: 35.45

Gene sequence:

>426_bases
ATGAGAAGACATTTTATTATTATCGTGCTTGGTATATTTCAGTTCGGCTGTATCCCTTTGGCAGAACATCATAATAAGAT
TTCACCTGCTACGATGCATGAAGAGTACCATGATATTAATTTTTCCAATTTATATGAAAAAAATCGCTCTTTTCCAGCAT
TAGAAACCGGTATCTATGCTATTTTGGATGGAATCTTAATTTCCTCAAGCCAGGATACGCATCTTGGTAAAAAACAATCG
AAACTTCTGGAAGAATATGTGCGTCAAAATAGATTATTCTGTCAAAAAGGTTTTGATCAGGAGTGGATGAATCAATTGAA
GCAGAATTTGGACAGGTTAGAAAAAACCGAAAACAATCGGATTGCATCTGCTGTAAATAAAAAAATGCAAGCGCTGTTTG
CTGAACGACAGTGCAACACATGGTAA

Upstream 100 bases:

>100_bases
TTCGTATTATAGTCAAAATTGAAATATTTCCTCAATGCTGGGTAGATATGTTAATTTCATAATGGATTGTTTTTTATGCT
CAATTTGTAGGTGGTGTATG

Downstream 100 bases:

>100_bases
CCAGGGCTCGCCGTTTTATCAGGCAGCCTGGTCCAAATCACATGTGAACTCAATCTTTCGAACCAATGATCACAGTATTT
TTTGTGCAGGATATCATGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MRRHFIIIVLGIFQFGCIPLAEHHNKISPATMHEEYHDINFSNLYEKNRSFPALETGIYAILDGILISSSQDTHLGKKQS
KLLEEYVRQNRLFCQKGFDQEWMNQLKQNLDRLEKTENNRIASAVNKKMQALFAERQCNTW

Sequences:

>Translated_141_residues
MRRHFIIIVLGIFQFGCIPLAEHHNKISPATMHEEYHDINFSNLYEKNRSFPALETGIYAILDGILISSSQDTHLGKKQS
KLLEEYVRQNRLFCQKGFDQEWMNQLKQNLDRLEKTENNRIASAVNKKMQALFAERQCNTW
>Mature_141_residues
MRRHFIIIVLGIFQFGCIPLAEHHNKISPATMHEEYHDINFSNLYEKNRSFPALETGIYAILDGILISSSQDTHLGKKQS
KLLEEYVRQNRLFCQKGFDQEWMNQLKQNLDRLEKTENNRIASAVNKKMQALFAERQCNTW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16585; Mature: 16585

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRHFIIIVLGIFQFGCIPLAEHHNKISPATMHEEYHDINFSNLYEKNRSFPALETGIYA
CCCHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHH
ILDGILISSSQDTHLGKKQSKLLEEYVRQNRLFCQKGFDQEWMNQLKQNLDRLEKTENNR
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCH
IASAVNKKMQALFAERQCNTW
HHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRRHFIIIVLGIFQFGCIPLAEHHNKISPATMHEEYHDINFSNLYEKNRSFPALETGIYA
CCCHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHH
ILDGILISSSQDTHLGKKQSKLLEEYVRQNRLFCQKGFDQEWMNQLKQNLDRLEKTENNR
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCH
IASAVNKKMQALFAERQCNTW
HHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA