Click here to switch to the map view.

The map label for this gene is 148359990

Identifier: 148359990

GI number: 148359990

Start: 3051526

End: 3051681

Strand: Reverse

Name: 148359990

Synonym: LPC_1920

Alternate gene names: NA

Gene position: 3051681-3051526 (Counterclockwise)

Preceding gene: 148359989

Following gene: 148359991

Centisome position: 85.33

GC content: 36.54

Gene sequence:

>156_bases
ATGTATAGATTGCCAATTTTTTATTTGAGTGAGATAGGTTTAAGTTGTGAGTCCATACAAAATGGAATGGTTCAAAACGA
AGGTTTAGCTCATTTAAAAGTTTTAGAGAAATTTGGCCCTGTGCGAAAGGCAACTCCGTCCGTTTGTGGAGTGTAA

Upstream 100 bases:

>100_bases
GCGAAACGAAATGTAAACAGACCCCCATTAAACTGTCATTTTTAAGCAATGTTCTTTGTAATAATAAGGTAATATTTGAT
AGCAGAGATCTGAGAGATTC

Downstream 100 bases:

>100_bases
TCAGGTGGCAAGGAAACGCAGCTTTATAACGATATAATTTAAACGAAAGATTTGATATTTGATGAACATTTATCAAATTT
AAAACATTAAGTTGTTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 51; Mature: 51

Protein sequence:

>51_residues
MYRLPIFYLSEIGLSCESIQNGMVQNEGLAHLKVLEKFGPVRKATPSVCGV

Sequences:

>Translated_51_residues
MYRLPIFYLSEIGLSCESIQNGMVQNEGLAHLKVLEKFGPVRKATPSVCGV
>Mature_51_residues
MYRLPIFYLSEIGLSCESIQNGMVQNEGLAHLKVLEKFGPVRKATPSVCGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5625; Mature: 5625

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRLPIFYLSEIGLSCESIQNGMVQNEGLAHLKVLEKFGPVRKATPSVCGV
CCCCHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MYRLPIFYLSEIGLSCESIQNGMVQNEGLAHLKVLEKFGPVRKATPSVCGV
CCCCHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA