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The map label for this gene is 148359962

Identifier: 148359962

GI number: 148359962

Start: 3078417

End: 3079313

Strand: Direct

Name: 148359962

Synonym: LPC_1891

Alternate gene names: NA

Gene position: 3078417-3079313 (Clockwise)

Preceding gene: 148359963

Following gene: 148359960

Centisome position: 86.07

GC content: 37.79

Gene sequence:

>897_bases
ATGAGCAATAAACTACGAAGCGCACTTTACTCAGTACACCAATTAATTAAACAAATGCAAGGTTATTCCTATGCCAGTAA
GGCAGATATGAAGCATATGATTAATCGCTGTATGAAAGATCTACACGAATTGGGTTTTAAAGTTGGTCATTTAAATGGTT
TAAAGCCCAAGCATATTTATGTATTGGTTGAACACTGGAAAAAGCAAGGCAAAAGTCCTGCAACAATCAAAAATTATATG
TCCAAATTGCGTAAACTCGCATATTTTCTTGATAAACCCAAGCTGGTTAAAACTGGTAATGATTCCTATCAAATTGATAA
ACGCACTTATATTCCCACTCAAAACAAAGCTATTCACCATATCGATTTAAACTTATGTACTGATCCGCATATTCGCCTAT
CCCTCGAAGCACAAATGCTTTTTGGCCTGCGTAGGGAAGAGTCCATGAAATTTGTAGTCAGTGAAGCCTGGAATGGTGAT
TGTTTGCATATCAAACCTAGTTGGACAAAGGGTGGTATCGGTCGATTGCTTACAATTACCAATGAGGAGCAAATGAAATG
GCTTTCAAAAGTCTGGCAACAGATAAGACGTGGTGAGTCCCTAATTCCTACGGTAAGAACCTATAAGCAGCATTTAGGTC
ATTATCAACAACAAGCTAAATTAATGGGTGTCTGTAAATTGCATGGCCTGCGACATGCTTACGCTCAACGTCGATATACC
GAATTGACTAAAGAATTTGATTCTTTAAAAGTTGGATTAATCTGCCCGATAGCTGGCGGAAAAACTACTAAAAAGCTCAA
TCGTGAAGAAAAGCAAATTGATAAGCAGGCGAGATCAATCATTAGCCGCGAACTTGGGCATTCTCGTTTGAATATTACTA
AAACTTATCTTGGTTAG

Upstream 100 bases:

>100_bases
AGCACACAACTATCATCTCAAATATCCCATTACCGTTTGTCCTTACTCATCATGGATGAAATGGGCTTGAAATCACGTAC
CACACTTTGGAGTTATCTCA

Downstream 100 bases:

>100_bases
AAACGTAAGAGCTACCTTGCTGCAGCATTCAAAATTTGAAAAATATAATATCAAATCTCACTATTGGAAATAGGTACAAT
TGGTGAATGTTGATTTTTTA

Product: putative integrase

Products: NA

Alternate protein names: Fis Family Transcriptional Regulator; Poisomerase/Recombinase/Integrase; Integrase Protein; DNA Breaking-Rejoining Protein; Tyrosine Recombinase; Phage Integrase Family Protein

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSNKLRSALYSVHQLIKQMQGYSYASKADMKHMINRCMKDLHELGFKVGHLNGLKPKHIYVLVEHWKKQGKSPATIKNYM
SKLRKLAYFLDKPKLVKTGNDSYQIDKRTYIPTQNKAIHHIDLNLCTDPHIRLSLEAQMLFGLRREESMKFVVSEAWNGD
CLHIKPSWTKGGIGRLLTITNEEQMKWLSKVWQQIRRGESLIPTVRTYKQHLGHYQQQAKLMGVCKLHGLRHAYAQRRYT
ELTKEFDSLKVGLICPIAGGKTTKKLNREEKQIDKQARSIISRELGHSRLNITKTYLG

Sequences:

>Translated_298_residues
MSNKLRSALYSVHQLIKQMQGYSYASKADMKHMINRCMKDLHELGFKVGHLNGLKPKHIYVLVEHWKKQGKSPATIKNYM
SKLRKLAYFLDKPKLVKTGNDSYQIDKRTYIPTQNKAIHHIDLNLCTDPHIRLSLEAQMLFGLRREESMKFVVSEAWNGD
CLHIKPSWTKGGIGRLLTITNEEQMKWLSKVWQQIRRGESLIPTVRTYKQHLGHYQQQAKLMGVCKLHGLRHAYAQRRYT
ELTKEFDSLKVGLICPIAGGKTTKKLNREEKQIDKQARSIISRELGHSRLNITKTYLG
>Mature_297_residues
SNKLRSALYSVHQLIKQMQGYSYASKADMKHMINRCMKDLHELGFKVGHLNGLKPKHIYVLVEHWKKQGKSPATIKNYMS
KLRKLAYFLDKPKLVKTGNDSYQIDKRTYIPTQNKAIHHIDLNLCTDPHIRLSLEAQMLFGLRREESMKFVVSEAWNGDC
LHIKPSWTKGGIGRLLTITNEEQMKWLSKVWQQIRRGESLIPTVRTYKQHLGHYQQQAKLMGVCKLHGLRHAYAQRRYTE
LTKEFDSLKVGLICPIAGGKTTKKLNREEKQIDKQARSIISRELGHSRLNITKTYLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34609; Mature: 34478

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKLRSALYSVHQLIKQMQGYSYASKADMKHMINRCMKDLHELGFKVGHLNGLKPKHIY
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHEE
VLVEHWKKQGKSPATIKNYMSKLRKLAYFLDKPKLVKTGNDSYQIDKRTYIPTQNKAIHH
EEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCEEECCCCCCEEEE
IDLNLCTDPHIRLSLEAQMLFGLRREESMKFVVSEAWNGDCLHIKPSWTKGGIGRLLTIT
EEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEC
NEEQMKWLSKVWQQIRRGESLIPTVRTYKQHLGHYQQQAKLMGVCKLHGLRHAYAQRRYT
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELTKEFDSLKVGLICPIAGGKTTKKLNREEKQIDKQARSIISRELGHSRLNITKTYLG
HHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHCCC
>Mature Secondary Structure 
SNKLRSALYSVHQLIKQMQGYSYASKADMKHMINRCMKDLHELGFKVGHLNGLKPKHIY
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHEE
VLVEHWKKQGKSPATIKNYMSKLRKLAYFLDKPKLVKTGNDSYQIDKRTYIPTQNKAIHH
EEEHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCEEECCCCCCEEEE
IDLNLCTDPHIRLSLEAQMLFGLRREESMKFVVSEAWNGDCLHIKPSWTKGGIGRLLTIT
EEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEC
NEEQMKWLSKVWQQIRRGESLIPTVRTYKQHLGHYQQQAKLMGVCKLHGLRHAYAQRRYT
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELTKEFDSLKVGLICPIAGGKTTKKLNREEKQIDKQARSIISRELGHSRLNITKTYLG
HHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA