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The map label for this gene is 148359951

Identifier: 148359951

GI number: 148359951

Start: 2824501

End: 2826507

Strand: Direct

Name: 148359951

Synonym: LPC_1880

Alternate gene names: NA

Gene position: 2824501-2826507 (Clockwise)

Preceding gene: 148359950

Following gene: 148359952

Centisome position: 78.97

GC content: 40.66

Gene sequence:

>2007_bases
ATGAGCCAATATCCCGTTGAAAACCTTTTGCGTGAACCCACTGAATTCTATACCTTTATGACCTGCACTTCACTGGCATG
GCTGACTGTCGCCAAACCACACCTGTTTTTACTCACCCAAGACATGGGAGTCTATGCAGCACTTAGCCTTATGACATTGG
GTCTAGTTAGAGGATACCAGGCCTTCCGCATCAAGCGTTATCACCGCAGGCTTATTGCTATGCCTTATTATGCTTTGTCC
ACCACGGAAGTGCCATTATCAAAGAAATGGTTGTTTCTTGGGAAAGGGTTTCGTTGGTTGCCTCATCATACGCAGCGATT
ACATCAAATTAAACAAATTAGAAATGAATTATTTATGCAACGAAATACGTGCTATCGCAAAATACGTGATTATTGCAAAA
ACCACGAAAGTTCATTATTAACCCAACTGTTTAATACCCCATCAAGATTCAATCCATTTAAACCTGACCCACCTGTAGGT
GGCAGCTCATACCTACATGGGCTAGGTGAAAAAGATAGTTCTGTCTATATCCCGCAGGAAGTGCGAGTTGGTCATACTTT
TGTAGTCGGGACAACTAGAGTTGGCAAAACACGTCTAGCAAGTATCCTAATCAATCAGGATATTAGAAATGGCGATGCAG
TGATTGTCGTTGACCCCAAAGGAGATTTAGATTTAGTTCGTGATATGTACTCAGCCTGCAAGGCTAGTGGCAGATTACAT
GATTTTAGAGTGGTGCATTTAGGTTTTCCTGAATTGTCTGCTCACTACAATCCGCTCAAAAACTATGATCAAGTCAGTGA
GGTTGCTACACGTGTTACCGATGCGATTCAAGCTGAGGGCGAAGGAAAACAGTTTGCAGCCTTTGCATGGAAATACGTGA
ACATTGTAGCGATCTGCCTTGAAGAAATGAAACAACTTATTTCTTACACTTCCATAGGATTTTATATCAATCGATTGGAT
CAATTACTCATGGCCTACTCTGATGCCATACTGCCCACACACGATCCAAATTATCATGAAAAAATAGAAGAAATCATCGC
TAATAATGACTGCCGTGTGGACAAATACGGAAATACACCACCGCCCATGAGTCGTTCAAAATCTGTGGTGAAGTATTTAC
AAGAGCATATCAGTAAAGCCATCACTTCAGGCAATGTTGAAAGCCTTCATGATCAAGTACTCATTGATCTGTTTGATGCT
GCCATCATGGACAAAAATTATTACGATAAAATCACGGCCAGTGTCGGCCCTGTGTTATCAGAAATTAATAAAAGTAATGC
ATCAAAGATCTTTTCATTTCATAAAAGCAATTGTGAAATCGAGTTGATGAGTGCAATAAAAAACAAACAAGTCATTTATA
TCGGACTGGATAGCTTAACAAACCCCAATATCGCCCAAGCAGTAGGTAAAGCCTTTTTGTCAGATTTAGTATCCACAGCT
GGAAAAATATATAAGGAAAGTAACGCGAATTACCGTCTCAATCTCCATTGCGATGAACTTTCTGAAATCATCCAAGACTC
ATTTGTCAAAATTTTAAATAAAGCCGGTGGAGCTGGTTTTCAAGTCACCGCTTATGCTCAGACCAAACAAGATATGGAGG
TGGCATTAGGCTCTAAAGCCAAAGCAGAAGTGACTGAAGGAAATCTAAATACGCTCATCATGTTACGTGTTAAAAATGAA
GAAACAGCCAATTTATTAGTTAAAGTGTTACCAAAAATTGGCGTGGTCGAGCACACTCAAGTGTCCATGGTCAACGACAC
ACCCCATGGCGAGGATGGCGTTTATTTTAACACCACCAATGAAGATCGAGTACAAACCACCGCAGTACCTATGATTGATG
TCAATGACATTATCTCATTGCCCAAAGGGCAAGCCTTTGTTTTAGTGAATGGCGGAGAGCTGTACAAAGTAAGAATACCC
TTACCTGTGAACGATGGATTAGCCCCCAAGGATATCAAAAGCGCTATTCGTGCAATTAACCAATTGGATGATAACCTTGG
AGATTAA

Upstream 100 bases:

>100_bases
TGAACTTGATGAGGTTCAAATTAAATTGGCTTTGCAAGCAAAATACTACCTGCTTGCGGCGCTAATCTTTTTTGAATTAC
TGGTTTGGTGGAGATAAATC

Downstream 100 bases:

>100_bases
TATGAAAGCAGAAATTACTTTAAACCTTCGTACCCGTGAAGTGTATAAATTATTTGAGAGGAAAATTAGTGGGGATAGGT
TATTTATTGATGTTATTTTG

Product: conjugative coupling factor TraD

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 668; Mature: 667

Protein sequence:

>668_residues
MSQYPVENLLREPTEFYTFMTCTSLAWLTVAKPHLFLLTQDMGVYAALSLMTLGLVRGYQAFRIKRYHRRLIAMPYYALS
TTEVPLSKKWLFLGKGFRWLPHHTQRLHQIKQIRNELFMQRNTCYRKIRDYCKNHESSLLTQLFNTPSRFNPFKPDPPVG
GSSYLHGLGEKDSSVYIPQEVRVGHTFVVGTTRVGKTRLASILINQDIRNGDAVIVVDPKGDLDLVRDMYSACKASGRLH
DFRVVHLGFPELSAHYNPLKNYDQVSEVATRVTDAIQAEGEGKQFAAFAWKYVNIVAICLEEMKQLISYTSIGFYINRLD
QLLMAYSDAILPTHDPNYHEKIEEIIANNDCRVDKYGNTPPPMSRSKSVVKYLQEHISKAITSGNVESLHDQVLIDLFDA
AIMDKNYYDKITASVGPVLSEINKSNASKIFSFHKSNCEIELMSAIKNKQVIYIGLDSLTNPNIAQAVGKAFLSDLVSTA
GKIYKESNANYRLNLHCDELSEIIQDSFVKILNKAGGAGFQVTAYAQTKQDMEVALGSKAKAEVTEGNLNTLIMLRVKNE
ETANLLVKVLPKIGVVEHTQVSMVNDTPHGEDGVYFNTTNEDRVQTTAVPMIDVNDIISLPKGQAFVLVNGGELYKVRIP
LPVNDGLAPKDIKSAIRAINQLDDNLGD

Sequences:

>Translated_668_residues
MSQYPVENLLREPTEFYTFMTCTSLAWLTVAKPHLFLLTQDMGVYAALSLMTLGLVRGYQAFRIKRYHRRLIAMPYYALS
TTEVPLSKKWLFLGKGFRWLPHHTQRLHQIKQIRNELFMQRNTCYRKIRDYCKNHESSLLTQLFNTPSRFNPFKPDPPVG
GSSYLHGLGEKDSSVYIPQEVRVGHTFVVGTTRVGKTRLASILINQDIRNGDAVIVVDPKGDLDLVRDMYSACKASGRLH
DFRVVHLGFPELSAHYNPLKNYDQVSEVATRVTDAIQAEGEGKQFAAFAWKYVNIVAICLEEMKQLISYTSIGFYINRLD
QLLMAYSDAILPTHDPNYHEKIEEIIANNDCRVDKYGNTPPPMSRSKSVVKYLQEHISKAITSGNVESLHDQVLIDLFDA
AIMDKNYYDKITASVGPVLSEINKSNASKIFSFHKSNCEIELMSAIKNKQVIYIGLDSLTNPNIAQAVGKAFLSDLVSTA
GKIYKESNANYRLNLHCDELSEIIQDSFVKILNKAGGAGFQVTAYAQTKQDMEVALGSKAKAEVTEGNLNTLIMLRVKNE
ETANLLVKVLPKIGVVEHTQVSMVNDTPHGEDGVYFNTTNEDRVQTTAVPMIDVNDIISLPKGQAFVLVNGGELYKVRIP
LPVNDGLAPKDIKSAIRAINQLDDNLGD
>Mature_667_residues
SQYPVENLLREPTEFYTFMTCTSLAWLTVAKPHLFLLTQDMGVYAALSLMTLGLVRGYQAFRIKRYHRRLIAMPYYALST
TEVPLSKKWLFLGKGFRWLPHHTQRLHQIKQIRNELFMQRNTCYRKIRDYCKNHESSLLTQLFNTPSRFNPFKPDPPVGG
SSYLHGLGEKDSSVYIPQEVRVGHTFVVGTTRVGKTRLASILINQDIRNGDAVIVVDPKGDLDLVRDMYSACKASGRLHD
FRVVHLGFPELSAHYNPLKNYDQVSEVATRVTDAIQAEGEGKQFAAFAWKYVNIVAICLEEMKQLISYTSIGFYINRLDQ
LLMAYSDAILPTHDPNYHEKIEEIIANNDCRVDKYGNTPPPMSRSKSVVKYLQEHISKAITSGNVESLHDQVLIDLFDAA
IMDKNYYDKITASVGPVLSEINKSNASKIFSFHKSNCEIELMSAIKNKQVIYIGLDSLTNPNIAQAVGKAFLSDLVSTAG
KIYKESNANYRLNLHCDELSEIIQDSFVKILNKAGGAGFQVTAYAQTKQDMEVALGSKAKAEVTEGNLNTLIMLRVKNEE
TANLLVKVLPKIGVVEHTQVSMVNDTPHGEDGVYFNTTNEDRVQTTAVPMIDVNDIISLPKGQAFVLVNGGELYKVRIPL
PVNDGLAPKDIKSAIRAINQLDDNLGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74969; Mature: 74838

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQYPVENLLREPTEFYTFMTCTSLAWLTVAKPHLFLLTQDMGVYAALSLMTLGLVRGYQ
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
AFRIKRYHRRLIAMPYYALSTTEVPLSKKWLFLGKGFRWLPHHTQRLHQIKQIRNELFMQ
HHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
RNTCYRKIRDYCKNHESSLLTQLFNTPSRFNPFKPDPPVGGSSYLHGLGEKDSSVYIPQE
HHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCCC
VRVGHTFVVGTTRVGKTRLASILINQDIRNGDAVIVVDPKGDLDLVRDMYSACKASGRLH
CCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCE
DFRVVHLGFPELSAHYNPLKNYDQVSEVATRVTDAIQAEGEGKQFAAFAWKYVNIVAICL
EEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
EEMKQLISYTSIGFYINRLDQLLMAYSDAILPTHDPNYHEKIEEIIANNDCRVDKYGNTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PPMSRSKSVVKYLQEHISKAITSGNVESLHDQVLIDLFDAAIMDKNYYDKITASVGPVLS
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EINKSNASKIFSFHKSNCEIELMSAIKNKQVIYIGLDSLTNPNIAQAVGKAFLSDLVSTA
HHCCCCHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
GKIYKESNANYRLNLHCDELSEIIQDSFVKILNKAGGAGFQVTAYAQTKQDMEVALGSKA
HHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHCCCCC
KAEVTEGNLNTLIMLRVKNEETANLLVKVLPKIGVVEHTQVSMVNDTPHGEDGVYFNTTN
CCEEECCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCC
EDRVQTTAVPMIDVNDIISLPKGQAFVLVNGGELYKVRIPLPVNDGLAPKDIKSAIRAIN
CCCEEEEEECEEEHHHHHCCCCCCEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHH
QLDDNLGD
HHHHCCCC
>Mature Secondary Structure 
SQYPVENLLREPTEFYTFMTCTSLAWLTVAKPHLFLLTQDMGVYAALSLMTLGLVRGYQ
CCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
AFRIKRYHRRLIAMPYYALSTTEVPLSKKWLFLGKGFRWLPHHTQRLHQIKQIRNELFMQ
HHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
RNTCYRKIRDYCKNHESSLLTQLFNTPSRFNPFKPDPPVGGSSYLHGLGEKDSSVYIPQE
HHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCCC
VRVGHTFVVGTTRVGKTRLASILINQDIRNGDAVIVVDPKGDLDLVRDMYSACKASGRLH
CCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCE
DFRVVHLGFPELSAHYNPLKNYDQVSEVATRVTDAIQAEGEGKQFAAFAWKYVNIVAICL
EEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
EEMKQLISYTSIGFYINRLDQLLMAYSDAILPTHDPNYHEKIEEIIANNDCRVDKYGNTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PPMSRSKSVVKYLQEHISKAITSGNVESLHDQVLIDLFDAAIMDKNYYDKITASVGPVLS
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EINKSNASKIFSFHKSNCEIELMSAIKNKQVIYIGLDSLTNPNIAQAVGKAFLSDLVSTA
HHCCCCHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
GKIYKESNANYRLNLHCDELSEIIQDSFVKILNKAGGAGFQVTAYAQTKQDMEVALGSKA
HHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHCCCCC
KAEVTEGNLNTLIMLRVKNEETANLLVKVLPKIGVVEHTQVSMVNDTPHGEDGVYFNTTN
CCEEECCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCC
EDRVQTTAVPMIDVNDIISLPKGQAFVLVNGGELYKVRIPLPVNDGLAPKDIKSAIRAIN
CCCEEEEEECEEEHHHHHCCCCCCEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHH
QLDDNLGD
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA