Click here to switch to the map view.

The map label for this gene is 148359948

Identifier: 148359948

GI number: 148359948

Start: 2822371

End: 2823939

Strand: Direct

Name: 148359948

Synonym: LPC_1877

Alternate gene names: NA

Gene position: 2822371-2823939 (Clockwise)

Preceding gene: 148359947

Following gene: 148359950

Centisome position: 78.91

GC content: 42.19

Gene sequence:

>1569_bases
ATGGTTGTATTTAGCCCTTTATCCTTGTACACCACCTATTTAGGCTGGCAGCAATATGAGGTTATTTTTAATGCCCTGTG
GCAAACCGGTTTGTTATACCTTGGTTTTCTTATGGTAGGGTATCGATTCTTAAAAAATGTGCTGGCACCTTCTGGTGCTA
CACATCACGCGGCAGAATATGCCTTGAATCATTTTCTTTATGAATTGGCAATTACTTTTTTGATTTGCGGCATCTTTATC
TACCCCTGTGTGCCATTGGAAGAAAAAGCCATGAGTTTTAAGCCTATGTGCGGTATAAAAAAAGGAACAGATGCAAAAAC
CTCTACGTTAAAAGATACAGGTACTACTTATGATGAAGCATTTGCAGACGTACTGACCCCCAATGTCAAAATGCCTATTG
GTTTTGCACTCTTGCAAAATTACATGTCAGGGATTACCTACGGCTTGATGAAAGTGACCGGTTGCACCGACAGCTTACAA
GCAATTGAAGGCGATTTAATTTCCACCTATTTACCTGCCGATGTACGTGAGCAAGCATTGAATTTTCACAGACAATGCTT
CCTTGAGGCCAGAAGCCAATATCACAATGAACCGCACGATAAAACTAAGGTCAATGACATTTTAAAAAAATACGGTGGTG
AGGAAGATTTGAAATGGGTGGGTTCCAAAGTCTATCAAACACTATACTATGATAAAATTTACGCAAGACAACCCGTAGCT
GGCTTTACCTTTAACGAAGCCCCCAACAAAAATCTCGAAAAAGCAGCAGAACGTGGTGATATTGATGCCAAACATCTGCC
AGAGCAAGGCTATCCCACCTGCAATCAATGGTGGAAAAAGCTCAAAACAGATTTGGTGCAAGTAGCCAATAACGCCAGTG
TCTTTGACAGCCACCTGAATTACTACGCGGTTTTAGACAGGGTACGCACATTCAAAAATAACCATCCCAAAGCCTGGGGT
TCGCAGTTAAGCTCAGAAGACTACATTGCCAAGATGTTGCTTAATGACAGTCGCGACATGCAGGCTAACAGTATGAAAAA
CCTAATGGGAAACACCAATGGGGCTTTTGGTAGTGCCATTTCTCATGGGTTAGTAAATATTGGGCAATTAACAAAATCAT
GGACATCAACGCCATTAAAGCGTGAAGCCATTATGCAAACGCTACCTGTCATGCAGGCTTTTTTGTATTTCTTCCTGATT
ATCTTGACTCCTGTGATTTTGGCTCTAAGTGGTTATAACCCTAAGGCGTTAGGCAGTATTTGCGGTCTGTTTATCATGGC
GATTTTCCTGCAATACCTGTGGCATCTGGTGGGTTTTGTCGAGCGCAGTGTGCTTGATCCTTTAGGACAAAACGATGCTA
TTTCAGCCATGCGCAATATGGCGGTTTTATTCTACTTTATTGCACCCATGTTGCTTTTAAAATTGTCCAGTCATTTTGGT
GGAGAAGCAGGGGCAGCCCTTGGTGCTTTGGTCAATGACGCAGCGCAACATAGTAACAAAGTTGCTAACTCAGGTGTGGA
TACCATCAAGCAAGGAGCAAAAATAGCCAGCATGGGGAAAGTAAAATGA

Upstream 100 bases:

>100_bases
GGTAGCGATATAGCCAAGGGCTTGCCTGGTGAAGATCATGAACAATCGCAAGTTAAAAATGGCGCAGTCTATGCGAAACC
TGATTCCAAAGGAGCATAAG

Downstream 100 bases:

>100_bases
AGCTAGTCTCCATGAATATGTCTGGCGTATTCAGATCCACTGATTGCACCATCTTCATAAAGTTCGGTTGCCTTCCCCGC
AACATAGTGTGGTTTATCTT

Product: membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MVVFSPLSLYTTYLGWQQYEVIFNALWQTGLLYLGFLMVGYRFLKNVLAPSGATHHAAEYALNHFLYELAITFLICGIFI
YPCVPLEEKAMSFKPMCGIKKGTDAKTSTLKDTGTTYDEAFADVLTPNVKMPIGFALLQNYMSGITYGLMKVTGCTDSLQ
AIEGDLISTYLPADVREQALNFHRQCFLEARSQYHNEPHDKTKVNDILKKYGGEEDLKWVGSKVYQTLYYDKIYARQPVA
GFTFNEAPNKNLEKAAERGDIDAKHLPEQGYPTCNQWWKKLKTDLVQVANNASVFDSHLNYYAVLDRVRTFKNNHPKAWG
SQLSSEDYIAKMLLNDSRDMQANSMKNLMGNTNGAFGSAISHGLVNIGQLTKSWTSTPLKREAIMQTLPVMQAFLYFFLI
ILTPVILALSGYNPKALGSICGLFIMAIFLQYLWHLVGFVERSVLDPLGQNDAISAMRNMAVLFYFIAPMLLLKLSSHFG
GEAGAALGALVNDAAQHSNKVANSGVDTIKQGAKIASMGKVK

Sequences:

>Translated_522_residues
MVVFSPLSLYTTYLGWQQYEVIFNALWQTGLLYLGFLMVGYRFLKNVLAPSGATHHAAEYALNHFLYELAITFLICGIFI
YPCVPLEEKAMSFKPMCGIKKGTDAKTSTLKDTGTTYDEAFADVLTPNVKMPIGFALLQNYMSGITYGLMKVTGCTDSLQ
AIEGDLISTYLPADVREQALNFHRQCFLEARSQYHNEPHDKTKVNDILKKYGGEEDLKWVGSKVYQTLYYDKIYARQPVA
GFTFNEAPNKNLEKAAERGDIDAKHLPEQGYPTCNQWWKKLKTDLVQVANNASVFDSHLNYYAVLDRVRTFKNNHPKAWG
SQLSSEDYIAKMLLNDSRDMQANSMKNLMGNTNGAFGSAISHGLVNIGQLTKSWTSTPLKREAIMQTLPVMQAFLYFFLI
ILTPVILALSGYNPKALGSICGLFIMAIFLQYLWHLVGFVERSVLDPLGQNDAISAMRNMAVLFYFIAPMLLLKLSSHFG
GEAGAALGALVNDAAQHSNKVANSGVDTIKQGAKIASMGKVK
>Mature_522_residues
MVVFSPLSLYTTYLGWQQYEVIFNALWQTGLLYLGFLMVGYRFLKNVLAPSGATHHAAEYALNHFLYELAITFLICGIFI
YPCVPLEEKAMSFKPMCGIKKGTDAKTSTLKDTGTTYDEAFADVLTPNVKMPIGFALLQNYMSGITYGLMKVTGCTDSLQ
AIEGDLISTYLPADVREQALNFHRQCFLEARSQYHNEPHDKTKVNDILKKYGGEEDLKWVGSKVYQTLYYDKIYARQPVA
GFTFNEAPNKNLEKAAERGDIDAKHLPEQGYPTCNQWWKKLKTDLVQVANNASVFDSHLNYYAVLDRVRTFKNNHPKAWG
SQLSSEDYIAKMLLNDSRDMQANSMKNLMGNTNGAFGSAISHGLVNIGQLTKSWTSTPLKREAIMQTLPVMQAFLYFFLI
ILTPVILALSGYNPKALGSICGLFIMAIFLQYLWHLVGFVERSVLDPLGQNDAISAMRNMAVLFYFIAPMLLLKLSSHFG
GEAGAALGALVNDAAQHSNKVANSGVDTIKQGAKIASMGKVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58160; Mature: 58160

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHCCCCC
>Mature Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA