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The map label for this gene is 148359926

Identifier: 148359926

GI number: 148359926

Start: 2804625

End: 2805824

Strand: Direct

Name: 148359926

Synonym: LPC_1855

Alternate gene names: NA

Gene position: 2804625-2805824 (Clockwise)

Preceding gene: 148359925

Following gene: 148359927

Centisome position: 78.42

GC content: 43.25

Gene sequence:

>1200_bases
TTGGCAGAAAAAGAACATAAGCATGTGGAGCAAGGTGCAAACCTGGAGTCCTTATTCCAGGCCTATTTTGATTGTCGCAA
GAATAAGCGTAATACCATGAATGCACTCCGCTTTGAAACGGATTATGAAAGCAATCTCATCGCTTTGCGAGATGAGCTCA
ATTCCAGCACCTGGCATCCTGGACGCTCCATTGCTTTTGTGATTGATAAACCGGTGAAACGCGAAATCTTTGCAGCAGAC
TTTCGTGACCGTGTGGTGCATCACTGGTTAATTAATCAATTGAATCCGCTGTTTGAGAAAACCTTTATTTATGACAGCTA
TGCGAGCCGCAAAGGACGGGGTGCGCATCTGGGGATTGCACGTGCCGCACAATTTATCCGCAAATGCTCCTTAAATTACC
AAAGAGACTGCTACGTGCTAAAACTTGATATCATGAGTTTTTTCATCTGCATTAATCGACGTATTCTCTGGGAAGGCCTT
CGCTGCTTTATCGAGAGGCATTATAACCAATCCGATAAGAAATTAATCCTGGAGGTAGCCAGAAAAATCGTTGAAAATGA
GCCAACAAGCAACTGTTTTATCAAGGGAAAACGGCGTGACTGGCAGGATTTCCCCAAAGACAAGAGTCTTTTTTATGCGA
AACCCCACTGCGGACTGCCGATTGGCAATCTCACAAGCCAGGTGTTCGCCAATTTTTATTTAAATCCTTTTGACCATTAT
ATCAAACACAATTTGGGCGTGCGTTTCTATGGTCGTTACGTCGATGATTTTATTCTGGTGCACGAAGATAAAATGTTTTT
AAAATCACTCATACCCCAAATGGAGCAGTTTTTACAGGAAGAGCTCGAACTTGAGATTCATCCGCGCAAGCGATACCTGC
AGCATTATCGCAAAGGCATTCCGTTTCTTGGGGTGATACTGAAGCCACACTGTATTTATGCAGGTCGTCGCATCAAAGGA
AACTTTTATGACGCCATTACAAAGCATAATGCAGTTATCAAAGACCACAAACCCACCATCGATGAGCAAATGGCCTTTTT
ATGTTCTATCAACTCTTATCTTGGGATTTTAAGTCATTACCAGACGTATCGCCTACGAAAAGGCATGCTCAAAAAGCACT
TATCCATCTGGTGGTGGAATCTGATGTTTTTCAGTGGCGGATGCGCCAAGTTGGTGGCTAAACAAAGAACGGCACGATAA

Upstream 100 bases:

>100_bases
ACAATCTACGGGTTAGGTGCGTTCGGGGTTTTAAACAAAGCAAAGTCACAATCGGCGCAGGTCTTTAACAAAGCCTGCGC
CACTTTACCGGGATGAATGA

Downstream 100 bases:

>100_bases
AGAGGATGTAAGTAAACAATGAGTTTAGATGTAGATGGCTTCGATGAACCGGTCGCAGGTGGCAGCGTCACCATTGCAAT
CAGCAATGACCATCGCCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Retron-Type Reverse Transcriptase; Reverse Transcriptase Family Protein; CRISPR-Associated Protein; Phage-Encoded Reverse Transcriptase

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MAEKEHKHVEQGANLESLFQAYFDCRKNKRNTMNALRFETDYESNLIALRDELNSSTWHPGRSIAFVIDKPVKREIFAAD
FRDRVVHHWLINQLNPLFEKTFIYDSYASRKGRGAHLGIARAAQFIRKCSLNYQRDCYVLKLDIMSFFICINRRILWEGL
RCFIERHYNQSDKKLILEVARKIVENEPTSNCFIKGKRRDWQDFPKDKSLFYAKPHCGLPIGNLTSQVFANFYLNPFDHY
IKHNLGVRFYGRYVDDFILVHEDKMFLKSLIPQMEQFLQEELELEIHPRKRYLQHYRKGIPFLGVILKPHCIYAGRRIKG
NFYDAITKHNAVIKDHKPTIDEQMAFLCSINSYLGILSHYQTYRLRKGMLKKHLSIWWWNLMFFSGGCAKLVAKQRTAR

Sequences:

>Translated_399_residues
MAEKEHKHVEQGANLESLFQAYFDCRKNKRNTMNALRFETDYESNLIALRDELNSSTWHPGRSIAFVIDKPVKREIFAAD
FRDRVVHHWLINQLNPLFEKTFIYDSYASRKGRGAHLGIARAAQFIRKCSLNYQRDCYVLKLDIMSFFICINRRILWEGL
RCFIERHYNQSDKKLILEVARKIVENEPTSNCFIKGKRRDWQDFPKDKSLFYAKPHCGLPIGNLTSQVFANFYLNPFDHY
IKHNLGVRFYGRYVDDFILVHEDKMFLKSLIPQMEQFLQEELELEIHPRKRYLQHYRKGIPFLGVILKPHCIYAGRRIKG
NFYDAITKHNAVIKDHKPTIDEQMAFLCSINSYLGILSHYQTYRLRKGMLKKHLSIWWWNLMFFSGGCAKLVAKQRTAR
>Mature_398_residues
AEKEHKHVEQGANLESLFQAYFDCRKNKRNTMNALRFETDYESNLIALRDELNSSTWHPGRSIAFVIDKPVKREIFAADF
RDRVVHHWLINQLNPLFEKTFIYDSYASRKGRGAHLGIARAAQFIRKCSLNYQRDCYVLKLDIMSFFICINRRILWEGLR
CFIERHYNQSDKKLILEVARKIVENEPTSNCFIKGKRRDWQDFPKDKSLFYAKPHCGLPIGNLTSQVFANFYLNPFDHYI
KHNLGVRFYGRYVDDFILVHEDKMFLKSLIPQMEQFLQEELELEIHPRKRYLQHYRKGIPFLGVILKPHCIYAGRRIKGN
FYDAITKHNAVIKDHKPTIDEQMAFLCSINSYLGILSHYQTYRLRKGMLKKHLSIWWWNLMFFSGGCAKLVAKQRTAR

Specific function: Unknown

COG id: COG3344

COG function: function code L; Retron-type reverse transcriptase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47404; Mature: 47272

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50878 RT_POL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKEHKHVEQGANLESLFQAYFDCRKNKRNTMNALRFETDYESNLIALRDELNSSTWHP
CCCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHEECCCCCCCEEEEHHHCCCCCCCC
GRSIAFVIDKPVKREIFAADFRDRVVHHWLINQLNPLFEKTFIYDSYASRKGRGAHLGIA
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RAAQFIRKCSLNYQRDCYVLKLDIMSFFICINRRILWEGLRCFIERHYNQSDKKLILEVA
HHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
RKIVENEPTSNCFIKGKRRDWQDFPKDKSLFYAKPHCGLPIGNLTSQVFANFYLNPFDHY
HHHHCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHH
IKHNLGVRFYGRYVDDFILVHEDKMFLKSLIPQMEQFLQEELELEIHPRKRYLQHYRKGI
HHHCCCCEEEHHHHHCEEEEECHHHHHHHHHHHHHHHHHHHHCEEECHHHHHHHHHHCCC
PFLGVILKPHCIYAGRRIKGNFYDAITKHNAVIKDHKPTIDEQMAFLCSINSYLGILSHY
CEEHHHHCCHHHCCCCEECCHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHH
QTYRLRKGMLKKHLSIWWWNLMFFSGGCAKLVAKQRTAR
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure 
AEKEHKHVEQGANLESLFQAYFDCRKNKRNTMNALRFETDYESNLIALRDELNSSTWHP
CCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHEECCCCCCCEEEEHHHCCCCCCCC
GRSIAFVIDKPVKREIFAADFRDRVVHHWLINQLNPLFEKTFIYDSYASRKGRGAHLGIA
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RAAQFIRKCSLNYQRDCYVLKLDIMSFFICINRRILWEGLRCFIERHYNQSDKKLILEVA
HHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
RKIVENEPTSNCFIKGKRRDWQDFPKDKSLFYAKPHCGLPIGNLTSQVFANFYLNPFDHY
HHHHCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHH
IKHNLGVRFYGRYVDDFILVHEDKMFLKSLIPQMEQFLQEELELEIHPRKRYLQHYRKGI
HHHCCCCEEEHHHHHCEEEEECHHHHHHHHHHHHHHHHHHHHCEEECHHHHHHHHHHCCC
PFLGVILKPHCIYAGRRIKGNFYDAITKHNAVIKDHKPTIDEQMAFLCSINSYLGILSHY
CEEHHHHCCHHHCCCCEECCHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHH
QTYRLRKGMLKKHLSIWWWNLMFFSGGCAKLVAKQRTAR
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA