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The map label for this gene is ygeK [C]

Identifier: 148359909

GI number: 148359909

Start: 2786342

End: 2787145

Strand: Direct

Name: ygeK [C]

Synonym: LPC_1838

Alternate gene names: 148359909

Gene position: 2786342-2787145 (Clockwise)

Preceding gene: 148359908

Following gene: 148359910

Centisome position: 77.91

GC content: 34.45

Gene sequence:

>804_bases
ATGCATAGCGTCAATGAAGATGGAACTATTTGTGTTAACTTAAATGACTACAATGAACTGTCAGATTCTATTCGATTCCG
TGCAAAAATTGATTACCTAATTGAAAAGCTTAACTGCCCCAAAGAAATTCCTAATTTTTCTATTTCAATTTTTTTTCATG
GTGGTCAACGATATTATATTTCTAATCTTTACCTATGGGCGATCCCTTATCGAACCGAAGGTTTGTATCGTGGAGACGTT
GATCATGATCGCACTCTTTATAGTGGTAAAGAATTTTTTATCCAGCGAGATATAAAATATGATGCGATGCAAATTCCTAT
TATTCAAATCCTGGAATCACGTTATAATCTAAACACTACTTTTGCTATGGTGAGGCAATGTGAAGAATGTGATTTTATTA
TCGAGGCTTACCATTCTAAAAAAGTAGAAGATCCTAAAAAACTCTACTATCAAGTACGCGATAATTTTGAACAGTTTATA
TGCCTTTTTTTTGATGCGATGCTGCCAGAAATAGTAACAGCCATACCCAACCAAAAATGGTTAGCTATATTCAATGATAG
TGAGTTTAGAAAAAATGTCATCATGCGCAAAGCAGTCAAAAAGCCACTGACACAGCTCACTCCAAGAGAATTACAATGCT
TGAGCTTAATTTCCAAAGGAATGACGATTAAAAAAATATCCGAATATCTTCATCTATCAAGCGAAACAGTGAATACGCAT
GCCAAATCCATCCGAACTAAAATGAGTTGCGTTAATATAACCGAAGCGGTATCAAAAGCATTTCGTTTAGGGCTATTATC
TTAA

Upstream 100 bases:

>100_bases
TTGAGGAATGTGGTCATATGGCCATGTTAGAACAACCAGACAAAATTAACCGAATATTGGCTGATTGGTTGTAAATAGTA
TCGATGTTAGGGATGTATCA

Downstream 100 bases:

>100_bases
AATACCCAAATTTGGGGATAGGATATCTTGCCAAACATTTTATACTCCACCATGTTGTCATAATATTTACACGGAGTTGT
AGCATGGGATGTATTATAGA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MHSVNEDGTICVNLNDYNELSDSIRFRAKIDYLIEKLNCPKEIPNFSISIFFHGGQRYYISNLYLWAIPYRTEGLYRGDV
DHDRTLYSGKEFFIQRDIKYDAMQIPIIQILESRYNLNTTFAMVRQCEECDFIIEAYHSKKVEDPKKLYYQVRDNFEQFI
CLFFDAMLPEIVTAIPNQKWLAIFNDSEFRKNVIMRKAVKKPLTQLTPRELQCLSLISKGMTIKKISEYLHLSSETVNTH
AKSIRTKMSCVNITEAVSKAFRLGLLS

Sequences:

>Translated_267_residues
MHSVNEDGTICVNLNDYNELSDSIRFRAKIDYLIEKLNCPKEIPNFSISIFFHGGQRYYISNLYLWAIPYRTEGLYRGDV
DHDRTLYSGKEFFIQRDIKYDAMQIPIIQILESRYNLNTTFAMVRQCEECDFIIEAYHSKKVEDPKKLYYQVRDNFEQFI
CLFFDAMLPEIVTAIPNQKWLAIFNDSEFRKNVIMRKAVKKPLTQLTPRELQCLSLISKGMTIKKISEYLHLSSETVNTH
AKSIRTKMSCVNITEAVSKAFRLGLLS
>Mature_267_residues
MHSVNEDGTICVNLNDYNELSDSIRFRAKIDYLIEKLNCPKEIPNFSISIFFHGGQRYYISNLYLWAIPYRTEGLYRGDV
DHDRTLYSGKEFFIQRDIKYDAMQIPIIQILESRYNLNTTFAMVRQCEECDFIIEAYHSKKVEDPKKLYYQVRDNFEQFI
CLFFDAMLPEIVTAIPNQKWLAIFNDSEFRKNVIMRKAVKKPLTQLTPRELQCLSLISKGMTIKKISEYLHLSSETVNTH
AKSIRTKMSCVNITEAVSKAFRLGLLS

Specific function: Unknown

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31294; Mature: 31294

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSVNEDGTICVNLNDYNELSDSIRFRAKIDYLIEKLNCPKEIPNFSISIFFHGGQRYYI
CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEE
SNLYLWAIPYRTEGLYRGDVDHDRTLYSGKEFFIQRDIKYDAMQIPIIQILESRYNLNTT
EEEEEEEEEECCCCCEECCCCCCCHHHCCHHEEEEECCCCCHHHHHHHHHHHHHCCCCHH
FAMVRQCEECDFIIEAYHSKKVEDPKKLYYQVRDNFEQFICLFFDAMLPEIVTAIPNQKW
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LAIFNDSEFRKNVIMRKAVKKPLTQLTPRELQCLSLISKGMTIKKISEYLHLSSETVNTH
EEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHH
AKSIRTKMSCVNITEAVSKAFRLGLLS
HHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHSVNEDGTICVNLNDYNELSDSIRFRAKIDYLIEKLNCPKEIPNFSISIFFHGGQRYYI
CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEE
SNLYLWAIPYRTEGLYRGDVDHDRTLYSGKEFFIQRDIKYDAMQIPIIQILESRYNLNTT
EEEEEEEEEECCCCCEECCCCCCCHHHCCHHEEEEECCCCCHHHHHHHHHHHHHCCCCHH
FAMVRQCEECDFIIEAYHSKKVEDPKKLYYQVRDNFEQFICLFFDAMLPEIVTAIPNQKW
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LAIFNDSEFRKNVIMRKAVKKPLTQLTPRELQCLSLISKGMTIKKISEYLHLSSETVNTH
EEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHH
AKSIRTKMSCVNITEAVSKAFRLGLLS
HHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA