Click here to switch to the map view.

The map label for this gene is chiA [H]

Identifier: 148359758

GI number: 148359758

Start: 2620235

End: 2621209

Strand: Reverse

Name: chiA [H]

Synonym: LPC_1682

Alternate gene names: 148359758

Gene position: 2621209-2620235 (Counterclockwise)

Preceding gene: 148359761

Following gene: 148359757

Centisome position: 73.29

GC content: 38.87

Gene sequence:

>975_bases
ATGCAATATAGCCGGTTTTTATGTTTATTAAATGGCATGTTATTATCCAGTAATGTTGCGGCGGTTTCACCCTCTGCTCC
TATCTTTAGTCCATATGTTGATTTAACGATTAATACTCATTGGGATTCGCAATCACAGGATATGGAGCCAATGGATTTGA
TTTCTCCGGCAAAAAAACTGGGGATTAAAGCTTATCATTTGGCTTTTATTACAGACAGTGGTCAATGCCAACCTGCCTGG
GGAGCCCAGCAAAATTATAGTGTGGCAAAGGGATGGGGTAAAAAACAGTTCGACACGTTATCAAGAGAGGGGGTGAAACT
CACCGCTTCATTTGGCGGAGCGAGCGGTACTGATATTTCCTATCATTGTGATAAAAGTCAATTAATTAATACGTTTAATC
AAGTGGTTAATCAATATCATGTGAATGTCCTTGATTTTGATATAGAAAATGGGACAGCCAATATTCCTAATTTGTTGCAG
GCTTTGAAATTATTCCAAAAGGAACATCCGGATATCTTGTTAAGTTTTACTCTTCCTGTGATGCCTGAGGGTTTAACTTC
TGTTGGAAAAGAGATAATCACCTCAGCGGCTACTCTAGATCTTCATTTTAATGTGAACATAATGGCTATGGATTACGGGC
CGGCTTATAGTGGAGATATGGGGGATTATGCGATATCCGCAGCAACGAATCTCCATCAATTTCTGCAGGAAATTTATCCG
GATAAAAAACCGGAGGCTTTATGGCAGATGATTGAAGTAACGCCAATGATAGGTGTGAATGATGTGAATACAGAGCAATT
TACTTTATCTAATGCAGCCCAATTAAAACAATTTGCACAGAAAAATTTGCTGGGGGGATTGTCAATGTGGTCTTTCAATC
GGGATAAACCTTGTGCTGACAAATGGGCAAGTCCTGTATGTAGCGGTAATAATTTGCAGAGTCATGATTATGAATTTGTG
AAATATTTTCAGTAA

Upstream 100 bases:

>100_bases
CTTTGTACCCTGTCAACTTGTTTATTTGATAACAAAATGATTGATTAATTGTCCTAATGATGCAAAAATAAACACAGTTT
GGGTTTTAAGGAACTATTGA

Downstream 100 bases:

>100_bases
TGGAATTCAAAGCGCACTGGAAAAGCTCTGAAAATTCGGAATTAACTCGGGTTTCTTTAGATCTGATCAATAAGAAAAAT
GCTTAAATTTAATTGCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Chitinase; Lysozyme [H]

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MQYSRFLCLLNGMLLSSNVAAVSPSAPIFSPYVDLTINTHWDSQSQDMEPMDLISPAKKLGIKAYHLAFITDSGQCQPAW
GAQQNYSVAKGWGKKQFDTLSREGVKLTASFGGASGTDISYHCDKSQLINTFNQVVNQYHVNVLDFDIENGTANIPNLLQ
ALKLFQKEHPDILLSFTLPVMPEGLTSVGKEIITSAATLDLHFNVNIMAMDYGPAYSGDMGDYAISAATNLHQFLQEIYP
DKKPEALWQMIEVTPMIGVNDVNTEQFTLSNAAQLKQFAQKNLLGGLSMWSFNRDKPCADKWASPVCSGNNLQSHDYEFV
KYFQ

Sequences:

>Translated_324_residues
MQYSRFLCLLNGMLLSSNVAAVSPSAPIFSPYVDLTINTHWDSQSQDMEPMDLISPAKKLGIKAYHLAFITDSGQCQPAW
GAQQNYSVAKGWGKKQFDTLSREGVKLTASFGGASGTDISYHCDKSQLINTFNQVVNQYHVNVLDFDIENGTANIPNLLQ
ALKLFQKEHPDILLSFTLPVMPEGLTSVGKEIITSAATLDLHFNVNIMAMDYGPAYSGDMGDYAISAATNLHQFLQEIYP
DKKPEALWQMIEVTPMIGVNDVNTEQFTLSNAAQLKQFAQKNLLGGLSMWSFNRDKPCADKWASPVCSGNNLQSHDYEFV
KYFQ
>Mature_324_residues
MQYSRFLCLLNGMLLSSNVAAVSPSAPIFSPYVDLTINTHWDSQSQDMEPMDLISPAKKLGIKAYHLAFITDSGQCQPAW
GAQQNYSVAKGWGKKQFDTLSREGVKLTASFGGASGTDISYHCDKSQLINTFNQVVNQYHVNVLDFDIENGTANIPNLLQ
ALKLFQKEHPDILLSFTLPVMPEGLTSVGKEIITSAATLDLHFNVNIMAMDYGPAYSGDMGDYAISAATNLHQFLQEIYP
DKKPEALWQMIEVTPMIGVNDVNTEQFTLSNAAQLKQFAQKNLLGGLSMWSFNRDKPCADKWASPVCSGNNLQSHDYEFV
KYFQ

Specific function: Bifunctional enzyme with lysozyme/chitinase activity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 chitin-binding type-3 domains [H]

Homologues:

Organism=Escherichia coli, GI1789736, Length=294, Percent_Identity=34.0136054421769, Blast_Score=135, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003610
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF02839 CBM_5_12 [H]

EC number: =3.2.1.14; =3.2.1.17 [H]

Molecular weight: Translated: 35959; Mature: 35959

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYSRFLCLLNGMLLSSNVAAVSPSAPIFSPYVDLTINTHWDSQSQDMEPMDLISPAKKL
CCHHHHHHHHHCHHHCCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHH
GIKAYHLAFITDSGQCQPAWGAQQNYSVAKGWGKKQFDTLSREGVKLTASFGGASGTDIS
CCEEEEEEEEECCCCCCCCCCCCCCCHHHHCCCCHHHHHHCCCCEEEEEECCCCCCCCCE
YHCDKSQLINTFNQVVNQYHVNVLDFDIENGTANIPNLLQALKLFQKEHPDILLSFTLPV
EECCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
MPEGLTSVGKEIITSAATLDLHFNVNIMAMDYGPAYSGDMGDYAISAATNLHQFLQEIYP
CCCHHHHHHHHHHHHHEEEEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCC
DKKPEALWQMIEVTPMIGVNDVNTEQFTLSNAAQLKQFAQKNLLGGLSMWSFNRDKPCAD
CCCHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCEECCCCCCCCHH
KWASPVCSGNNLQSHDYEFVKYFQ
HHCCCCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure
MQYSRFLCLLNGMLLSSNVAAVSPSAPIFSPYVDLTINTHWDSQSQDMEPMDLISPAKKL
CCHHHHHHHHHCHHHCCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHH
GIKAYHLAFITDSGQCQPAWGAQQNYSVAKGWGKKQFDTLSREGVKLTASFGGASGTDIS
CCEEEEEEEEECCCCCCCCCCCCCCCHHHHCCCCHHHHHHCCCCEEEEEECCCCCCCCCE
YHCDKSQLINTFNQVVNQYHVNVLDFDIENGTANIPNLLQALKLFQKEHPDILLSFTLPV
EECCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
MPEGLTSVGKEIITSAATLDLHFNVNIMAMDYGPAYSGDMGDYAISAATNLHQFLQEIYP
CCCHHHHHHHHHHHHHEEEEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCC
DKKPEALWQMIEVTPMIGVNDVNTEQFTLSNAAQLKQFAQKNLLGGLSMWSFNRDKPCAD
CCCHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCEECCCCCCCCHH
KWASPVCSGNNLQSHDYEFVKYFQ
HHCCCCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 2661540; 10419961; 10760150 [H]