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The map label for this gene is 148359706

Identifier: 148359706

GI number: 148359706

Start: 2543236

End: 2543922

Strand: Reverse

Name: 148359706

Synonym: LPC_1627

Alternate gene names: NA

Gene position: 2543922-2543236 (Counterclockwise)

Preceding gene: 148359707

Following gene: 148359703

Centisome position: 71.13

GC content: 41.34

Gene sequence:

>687_bases
ATGAGCAAAACTGAGAGACTCTTTCATCTGTTGCAAATTTTGCGGCGTTACCGTTATCCTCTTAGCGGACAATTTCTTGC
CAATGAGTTGGATGTAAGTATCCGTACCATCTATCGGGACATTGCGGTTTTACAGGCTCAAGGTGCTGATATAGAGGGTG
AACCAGGATTGGGTTATGTGTTAAAGCCAGGTTTTATGTTACCGCCTTTGATGTTTAATGAAGAGGAAATTGAGGCTCTT
GTTTTAGGCTCCAGATGGGTGGCTAAAAAAACGGATACTCACTTGCAACAGGCTGCTCATAATGCTTTGGCTAAAATCGC
TTCTGTACTTCCTGCCGATTTGCGACAGCAATTGGAGCTATCCAGTTTATTAATAGGGCCTGGTGAAGTGATTTCAGGAG
AAGATGAATCCCTGGCTTTAGTCAGGAAGGCAATACGAAAAGAGCTGAAATTGTTTATTCAATACCATGACTTAAAAGGA
AATGTTTCAACACGTACGATTTGGCCAATTGGACTTGGGTATTTTGATCAAGTAAGAGTTTTGATTGCCTGGTGTGAATT
AAAAAAGGATTTTCGTCATTTTAGAGCCGATAGAATTGTAGATGTTGAAAACTTGGGGGTCTCTTATGCAAAGCGACGCT
CGGTGTTGCTTCATGATTGGCGAAAGCAAAATAATATCCCAGGTTGA

Upstream 100 bases:

>100_bases
TGGTGCTTTTTAGAGGCATCTGCTGATGGTTTGAATATTTATAAAAAGATTGGTTTTCGTGAACTGTTTAAAAATCTTTA
TTATGAAGAGCAATGCCAAT

Downstream 100 bases:

>100_bases
TGACAACACGATGTTATTGGCGCGTTAACTTAAACAGGTAAAATTTAATGCCGGGAATCAAGCTTTACTTTCTTCCCGGA
TTAAGATTGCTTCTTATGCG

Product: DeoR family transporter transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; DeoR Family Transcriptional Regulator; DeoR-Family Transcriptional Regulator; Helix-Turn-Helix Domain Containing Protein Type; HTH Domain Family; Transcription Regulator Protein; Repressor Transcription Regulator Protein; Transcriptional Regulator Protein; HTH Type; Regulatory Protein; Bacterial Regulatory Protein DeoR Family; HTH Domain-Containing Protein; DeoR Family Transriptional Regulator; Transcription Regulator Protein DeoR Family; Protein Containing HTH Domain; Transriptional Regulator DeoR Family; DeoR-Family Protein Transcriptional Regulator; NB-Dependent Receptor; HTH Domain-Containing; Regulatory Protein Deor; Helix-Turn-Helix Domain-Containing Protein; HTH Domain Protein; Transcriptional Regulator-Like; Transcriptional Repressor; Helix-Turn-Helix Family Protein

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSKTERLFHLLQILRRYRYPLSGQFLANELDVSIRTIYRDIAVLQAQGADIEGEPGLGYVLKPGFMLPPLMFNEEEIEAL
VLGSRWVAKKTDTHLQQAAHNALAKIASVLPADLRQQLELSSLLIGPGEVISGEDESLALVRKAIRKELKLFIQYHDLKG
NVSTRTIWPIGLGYFDQVRVLIAWCELKKDFRHFRADRIVDVENLGVSYAKRRSVLLHDWRKQNNIPG

Sequences:

>Translated_228_residues
MSKTERLFHLLQILRRYRYPLSGQFLANELDVSIRTIYRDIAVLQAQGADIEGEPGLGYVLKPGFMLPPLMFNEEEIEAL
VLGSRWVAKKTDTHLQQAAHNALAKIASVLPADLRQQLELSSLLIGPGEVISGEDESLALVRKAIRKELKLFIQYHDLKG
NVSTRTIWPIGLGYFDQVRVLIAWCELKKDFRHFRADRIVDVENLGVSYAKRRSVLLHDWRKQNNIPG
>Mature_227_residues
SKTERLFHLLQILRRYRYPLSGQFLANELDVSIRTIYRDIAVLQAQGADIEGEPGLGYVLKPGFMLPPLMFNEEEIEALV
LGSRWVAKKTDTHLQQAAHNALAKIASVLPADLRQQLELSSLLIGPGEVISGEDESLALVRKAIRKELKLFIQYHDLKGN
VSTRTIWPIGLGYFDQVRVLIAWCELKKDFRHFRADRIVDVENLGVSYAKRRSVLLHDWRKQNNIPG

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26028; Mature: 25896

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTERLFHLLQILRRYRYPLSGQFLANELDVSIRTIYRDIAVLQAQGADIEGEPGLGYV
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
LKPGFMLPPLMFNEEEIEALVLGSRWVAKKTDTHLQQAAHNALAKIASVLPADLRQQLEL
ECCCCCCCCCCCCHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
SSLLIGPGEVISGEDESLALVRKAIRKELKLFIQYHDLKGNVSTRTIWPIGLGYFDQVRV
HHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHH
LIAWCELKKDFRHFRADRIVDVENLGVSYAKRRSVLLHDWRKQNNIPG
HHHHHHHHHHHHHHHHHCEECHHHCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SKTERLFHLLQILRRYRYPLSGQFLANELDVSIRTIYRDIAVLQAQGADIEGEPGLGYV
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
LKPGFMLPPLMFNEEEIEALVLGSRWVAKKTDTHLQQAAHNALAKIASVLPADLRQQLEL
ECCCCCCCCCCCCHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
SSLLIGPGEVISGEDESLALVRKAIRKELKLFIQYHDLKGNVSTRTIWPIGLGYFDQVRV
HHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHH
LIAWCELKKDFRHFRADRIVDVENLGVSYAKRRSVLLHDWRKQNNIPG
HHHHHHHHHHHHHHHHHCEECHHHCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA