Click here to switch to the map view.

The map label for this gene is 148359630

Identifier: 148359630

GI number: 148359630

Start: 2415886

End: 2416230

Strand: Reverse

Name: 148359630

Synonym: LPC_1545

Alternate gene names: NA

Gene position: 2416230-2415886 (Counterclockwise)

Preceding gene: 148359634

Following gene: 148359628

Centisome position: 67.56

GC content: 37.68

Gene sequence:

>345_bases
TTGGCTTTACTGCGTACGCGACCGGATAGATTAACACCTCAACAGCGACTTAAGCGCGATGCAGTCCTTGAGGATAATCC
GGCTATAAAAGCTATATACCAGTTCCAGCAACAAGTTCATGCATTATTCTTACATAAAGCTATGAATAAAGATTGGTGTA
AAAAAATGATTCCCCAGTTTTTAAATATGCTTGATGACTTAAAGAATAGTCCCTTTAAAGCCTTGGCAGCTCTTGGAAAA
ACATTCTGTCAATGGCAAGAAGAGATTGTTCGTATGTGGCGGTTTAGAAAATCTAATGACATTACAGAAGGCTTTCACAG
AAAGATGAAATTGAGCCATTTATAA

Upstream 100 bases:

>100_bases
AGGGATTAAATGAATAAAACGACGATTTGGGGAGTATAAAATAGACATTTTCTAGCTGAGAGCAGAATACTATTCTTTAA
GGCTATAAGTCAATCTTATT

Downstream 100 bases:

>100_bases
TTTATTATCTCTTTATTTTATATCTCTTTTTTTGAAAATTTGATGGGATCGCTCAGGGCCCGTCCCCATTTCTTTAAAGA
ATATCGAATTCACGTTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase-Like Protein; Transposase TnpA; TnpA Transposase

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MALLRTRPDRLTPQQRLKRDAVLEDNPAIKAIYQFQQQVHALFLHKAMNKDWCKKMIPQFLNMLDDLKNSPFKALAALGK
TFCQWQEEIVRMWRFRKSNDITEGFHRKMKLSHL

Sequences:

>Translated_114_residues
MALLRTRPDRLTPQQRLKRDAVLEDNPAIKAIYQFQQQVHALFLHKAMNKDWCKKMIPQFLNMLDDLKNSPFKALAALGK
TFCQWQEEIVRMWRFRKSNDITEGFHRKMKLSHL
>Mature_113_residues
ALLRTRPDRLTPQQRLKRDAVLEDNPAIKAIYQFQQQVHALFLHKAMNKDWCKKMIPQFLNMLDDLKNSPFKALAALGKT
FCQWQEEIVRMWRFRKSNDITEGFHRKMKLSHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13654; Mature: 13523

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLRTRPDRLTPQQRLKRDAVLEDNPAIKAIYQFQQQVHALFLHKAMNKDWCKKMIPQF
CCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LNMLDDLKNSPFKALAALGKTFCQWQEEIVRMWRFRKSNDITEGFHRKMKLSHL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALLRTRPDRLTPQQRLKRDAVLEDNPAIKAIYQFQQQVHALFLHKAMNKDWCKKMIPQF
CCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LNMLDDLKNSPFKALAALGKTFCQWQEEIVRMWRFRKSNDITEGFHRKMKLSHL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA