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The map label for this gene is 148359537

Identifier: 148359537

GI number: 148359537

Start: 2319412

End: 2319894

Strand: Direct

Name: 148359537

Synonym: LPC_1449

Alternate gene names: NA

Gene position: 2319412-2319894 (Clockwise)

Preceding gene: 148359536

Following gene: 148359538

Centisome position: 64.85

GC content: 35.2

Gene sequence:

>483_bases
ATGCCTATGAATATAAGTAATACGAAAGAACGGATATTAGCAGTTGCGGAAGCATTGATCCAAAAAGACGGATATAACGC
CTTTAGTTTCAAAGATATTGCAACAGCCATCAATATTAAAACTGCCAGCATCCATTATCATTTTCCTTCAAAAGAAGATC
TTGGTGTGGCAGTTATATCCTGGCATGCCGATAAAATTGCTGCTGTGTTATCTGACATAAGCAATAATTCATCGTTATCA
ACCAAAGAAAAAATTCAAAAATTCTTTGATGCCATTTTAACAATCACCTACAACGCTGAAAACAAAATGTGCCTCGGAGG
TATGTTCGCTTCTGATTTTCAATCATTACCCGTTTCAATTCAAAATCAGGCAAAAAAATTTTTTGAACTTATCATTGAAG
GCTTAAAGGGAGTTCTGGAGGCAGATGGTAATGATAATGAATCCTCATTATCTATCGCCAAACCAAATTATTTCCTGGAT
TGA

Upstream 100 bases:

>100_bases
AGTCCACCACCCACTTCTATTTAGATAAACAAGTGTTATTTTAATTTGATATAGAATACTATAAAAAGTTTGACAATCTA
TCTATGAGTAGGTAAAATTC

Downstream 100 bases:

>100_bases
AGGCGGGTTATTATTAGCAAGATTATATGGAGATGAAACGTTCCTGGAAGGAGTTCGGCGCTTTATTGATCAAACAATAA
AGTGATTTTTTTTAACATCC

Product: TetR family transporter transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; HTH-Type Transcriptional Regulator; Transcriptional Regulator Protein; TetR Family Regulatory Protein; Transcriptional Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; HTH-Type Protein SlmA; AcrR Family Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator Of TetR Family Protein; TetR-Family Transcriptional Regulator; Transcriptional Regulator Protein Tetr Family

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MPMNISNTKERILAVAEALIQKDGYNAFSFKDIATAINIKTASIHYHFPSKEDLGVAVISWHADKIAAVLSDISNNSSLS
TKEKIQKFFDAILTITYNAENKMCLGGMFASDFQSLPVSIQNQAKKFFELIIEGLKGVLEADGNDNESSLSIAKPNYFLD

Sequences:

>Translated_160_residues
MPMNISNTKERILAVAEALIQKDGYNAFSFKDIATAINIKTASIHYHFPSKEDLGVAVISWHADKIAAVLSDISNNSSLS
TKEKIQKFFDAILTITYNAENKMCLGGMFASDFQSLPVSIQNQAKKFFELIIEGLKGVLEADGNDNESSLSIAKPNYFLD
>Mature_159_residues
PMNISNTKERILAVAEALIQKDGYNAFSFKDIATAINIKTASIHYHFPSKEDLGVAVISWHADKIAAVLSDISNNSSLST
KEKIQKFFDAILTITYNAENKMCLGGMFASDFQSLPVSIQNQAKKFFELIIEGLKGVLEADGNDNESSLSIAKPNYFLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17627; Mature: 17496

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMNISNTKERILAVAEALIQKDGYNAFSFKDIATAINIKTASIHYHFPSKEDLGVAVIS
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEEEEEEEEEECCCCCCCCEEEEE
WHADKIAAVLSDISNNSSLSTKEKIQKFFDAILTITYNAENKMCLGGMFASDFQSLPVSI
ECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECCCCCEEECCHHHHHHHHCCCCH
QNQAKKFFELIIEGLKGVLEADGNDNESSLSIAKPNYFLD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
PMNISNTKERILAVAEALIQKDGYNAFSFKDIATAINIKTASIHYHFPSKEDLGVAVIS
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEEEEEEEEEECCCCCCCCEEEEE
WHADKIAAVLSDISNNSSLSTKEKIQKFFDAILTITYNAENKMCLGGMFASDFQSLPVSI
ECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECCCCCEEECCHHHHHHHHCCCCH
QNQAKKFFELIIEGLKGVLEADGNDNESSLSIAKPNYFLD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA