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The map label for this gene is 148358888

Identifier: 148358888

GI number: 148358888

Start: 1568780

End: 1569631

Strand: Reverse

Name: 148358888

Synonym: LPC_0773

Alternate gene names: NA

Gene position: 1569631-1568780 (Counterclockwise)

Preceding gene: 148358889

Following gene: 148358887

Centisome position: 43.89

GC content: 32.75

Gene sequence:

>852_bases
ATGATTAATATTATTAAAAACAGAAACAAGGAAAAGCATACTACTTCCAATGAGTTGCAATCAAAAATTGAGAAGGAGCA
GGTCAAACTGCTTTTTGATCAAGTTGGTATGGCTATATCAGGCGAAGCTTTAGCAGTAACTATACTGCCTATTGCATTAT
GGTCTGTTACAAATCATGAGCTGCTTATTATTTGGATGATTTTTACTTATGTTTTTTCAGATCTTTATAAAAGCATGCTG
CTCTTCTATTACAATAAACAACCAACATTATTTTCAACTGAAAATTGGTTGTTCCTTTTTAACTTGGGTGTTGTAAGTTC
TGGCTTGGCATGGGGATTTGCCAGTTCAATTATGATTCCAGCCTCTAGTACATTGCATCAAATCTTTGTCGTTTTTCTTA
TTACAGGAGTTACAGCAGCAGCCAACTCACTCTATTCACCTGTGCGATTATCCTATTTTTTATTTCTGGTCACTGCTTTT
GTTCCTTTCACTATATGGTTATTTTCAAAAGGACAAGTTTATTTATTGTTGGGGTTTTGTGGCATTATTTATATGGGGAT
TATGTTATTTATTTCATATTACTCAAACAGGATTTTGATTAATACCTTAAAAATGCGCTTTAAAATCTCTAATTTAAATT
CAACTAAAGATATTTTAGAAAAAAAAGTAGCAGACAGAACCAAAGAATTGGAAAAAATCCTGGCTTTAACCAAATCAACT
TTAGAGTCAACAGCGGATGGTATTTTAGTTGTCGATCTCAAAGGTAATATCAGGGCAAAATCATACTTTGCCCTGAATTT
GCCCAATCAAGAGTTCACTTCTAAATTTATCAGACCACATAGCCTTTTTTAA

Upstream 100 bases:

>100_bases
CACAATGCACTTAGTTTTATTTTCTAACTGTTTACGAGGAAAACAATCAACATTCATGCTCGCTTCGCTTTTTAACATAC
CATTTTACTAACTACTTGTT

Downstream 100 bases:

>100_bases
TTTTCCCTTCATGCTATTTTTCTGGGGATGAAGTCGAGCCAGATTGAGTGCAAACCTACGAAGCAAGGCCAGATTTTCTG
CTGCGTTGTCTCTTCGTACT

Product: inner membrane protein/sensory box protein LssE

Products: NA

Alternate protein names: Integral Membrane Sensor Hybrid Histidine Kinase; Signal Transduction Histidine Kinase-Like; PAS Sensor Diguanylate Cyclase/Phophodiesterase; PAS/PAC Sensor Protein; Regulatory Protein; Inner Membrane Protein/Sensory Box Protein LssE

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MINIIKNRNKEKHTTSNELQSKIEKEQVKLLFDQVGMAISGEALAVTILPIALWSVTNHELLIIWMIFTYVFSDLYKSML
LFYYNKQPTLFSTENWLFLFNLGVVSSGLAWGFASSIMIPASSTLHQIFVVFLITGVTAAANSLYSPVRLSYFLFLVTAF
VPFTIWLFSKGQVYLLLGFCGIIYMGIMLFISYYSNRILINTLKMRFKISNLNSTKDILEKKVADRTKELEKILALTKST
LESTADGILVVDLKGNIRAKSYFALNLPNQEFTSKFIRPHSLF

Sequences:

>Translated_283_residues
MINIIKNRNKEKHTTSNELQSKIEKEQVKLLFDQVGMAISGEALAVTILPIALWSVTNHELLIIWMIFTYVFSDLYKSML
LFYYNKQPTLFSTENWLFLFNLGVVSSGLAWGFASSIMIPASSTLHQIFVVFLITGVTAAANSLYSPVRLSYFLFLVTAF
VPFTIWLFSKGQVYLLLGFCGIIYMGIMLFISYYSNRILINTLKMRFKISNLNSTKDILEKKVADRTKELEKILALTKST
LESTADGILVVDLKGNIRAKSYFALNLPNQEFTSKFIRPHSLF
>Mature_283_residues
MINIIKNRNKEKHTTSNELQSKIEKEQVKLLFDQVGMAISGEALAVTILPIALWSVTNHELLIIWMIFTYVFSDLYKSML
LFYYNKQPTLFSTENWLFLFNLGVVSSGLAWGFASSIMIPASSTLHQIFVVFLITGVTAAANSLYSPVRLSYFLFLVTAF
VPFTIWLFSKGQVYLLLGFCGIIYMGIMLFISYYSNRILINTLKMRFKISNLNSTKDILEKKVADRTKELEKILALTKST
LESTADGILVVDLKGNIRAKSYFALNLPNQEFTSKFIRPHSLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32257; Mature: 32257

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINIIKNRNKEKHTTSNELQSKIEKEQVKLLFDQVGMAISGEALAVTILPIALWSVTNHE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCEEHHHHHHHHHCCCCC
LLIIWMIFTYVFSDLYKSMLLFYYNKQPTLFSTENWLFLFNLGVVSSGLAWGFASSIMIP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEHHHHHCCHHHHHHCCEECC
ASSTLHQIFVVFLITGVTAAANSLYSPVRLSYFLFLVTAFVPFTIWLFSKGQVYLLLGFC
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHH
GIIYMGIMLFISYYSNRILINTLKMRFKISNLNSTKDILEKKVADRTKELEKILALTKST
HHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LESTADGILVVDLKGNIRAKSYFALNLPNQEFTSKFIRPHSLF
HHHCCCCEEEEEECCCEEEEEEEEEECCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MINIIKNRNKEKHTTSNELQSKIEKEQVKLLFDQVGMAISGEALAVTILPIALWSVTNHE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCEEHHHHHHHHHCCCCC
LLIIWMIFTYVFSDLYKSMLLFYYNKQPTLFSTENWLFLFNLGVVSSGLAWGFASSIMIP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEHHHHHCCHHHHHHCCEECC
ASSTLHQIFVVFLITGVTAAANSLYSPVRLSYFLFLVTAFVPFTIWLFSKGQVYLLLGFC
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHH
GIIYMGIMLFISYYSNRILINTLKMRFKISNLNSTKDILEKKVADRTKELEKILALTKST
HHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LESTADGILVVDLKGNIRAKSYFALNLPNQEFTSKFIRPHSLF
HHHCCCCEEEEEECCCEEEEEEEEEECCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA