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The map label for this gene is fliC [H]

Identifier: 148358872

GI number: 148358872

Start: 1546346

End: 1547773

Strand: Reverse

Name: fliC [H]

Synonym: LPC_0756

Alternate gene names: 148358872

Gene position: 1547773-1546346 (Counterclockwise)

Preceding gene: 148358877

Following gene: 148358871

Centisome position: 43.28

GC content: 45.73

Gene sequence:

>1428_bases
ATGGCTCAAGTAATCAACACTAATGTGGCTTCGCTTACAGCCCAACGCAATTTGGGTGTTTCGGGCAACATGATGCAGAC
ATCAATCCAGCGTTTATCATCAGGATTAAGAATTAACAGTGCCAAAGATGATGCAGCAGGACTCGCCATTTCTCAACGAA
TGACTGCACAAATTCGCGGGATGAATCAAGCCGTTAGAAATGCTAACGATGGTATCTCCCTATCACAGGTTGCTGAAGGA
GCAATGCAGGAAACAACCAATATTTTGCAACGTATGCGTGAGCTTTCCGTTCAAGCTGCCAACTCGACCAATAACTCATC
TGACCGCGCCTCAATTCAAAGCGAAATTTCACAATTAAAAAGTGAATTGGAGCGTATTGCTCAAAATACTGAATTCAATG
GTCAAAGAATTCTCGATGGTTCTTTCTCTGGCGCAAGCTTCCAGGTTGGGGCGAATTCAAACCAAACCATCAATTTCAGT
ATCGGCAGCATAAAAGCTTCTTCTATTGGTGGTATTGCCACGGCAACAGGAACAGAAGTAGCTGGTGCAGCAGCGACAGA
TATTACTATCGCAATTGGAGGAGGAGCAGCAACCAGCATTAACTCTTCTGCCAATTTTACCGGGGCACTAAACGGACAAG
ATGCTACGTCTGCCTATGCCAAAGCAGCGGCTATCAACGATGCCGGGATAGGAGGACTATCGGTTACAGCCTCTACGAGC
GGCACACAAGCAGTTGGCGCAATAGGTGGAACCGCAGGTGATACCTACAACTTAACGATTAATGGTGTTGCTATATACAC
TAACCTTGATGTAGCAACAGCATTAACCAACTCCGATCTTCGGGATGCCATCAATGGTGTCAGTAACCAAACTGGAGTTG
TCGCGTCACTTAACGGTGGTAATATGACACTCACTGCTGCTGATGGCAGAAACATTACGGTAACAGAAAGCGGTACAGGT
TTTACTGCAGGTACTGACGGTTTAACTGTGACTGGCGGCGCATTTGATGGCGCGCTACGCGGTACTTTATCAATCAGCGC
CGTTGATACCATCGCGATTGGTGGTACTGTTGCTAACATTGGTTTAAGTGCCAATATCTCTAAAGACACAGTAGGGATAG
ATTCACTGGATGTGAGCACAGCGTCTGGCGCTCAAACAGCGATTAAGAGAATTGATGCAGCTCTCAATAGCGTAAACTCT
AATCGGGCTAATATGGGTGCTCTGCAAAATCGCTTTGAATCAACGATAGCCAACCTGCAAAACGTATCAGACAACTTATC
AGCTGCTAGAAGTCGCATTCAAGATGCTGATTACGCTGCTGAAATGGCTAGTTTGACCAAAAACCAAATTCTGCAACAAG
CAGGTACAGCGATGTTGGCACAGGCTAATAGCCTACCGCAATCTGTATTATCATTGTTAGGTCGATAG

Upstream 100 bases:

>100_bases
CGATAACTAAATCGGGTACAGTAAATTCACAACAATAAATCGAATTTACTGAATTACAAATGTCCCATACCAGGGATTCA
GGTCTGAGGAGACTAAAACT

Downstream 100 bases:

>100_bases
GATGTCGCAATCGAAGTGCAGCAACAACTGCACTTCGATTTCTTTATACCGCGGTTGATGGGTATAAAAAGGAGTATGAA
AAATGAGTATTGAACCTGTA

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MAQVINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQAVRNANDGISLSQVAEG
AMQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSELERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFS
IGSIKASSIGGIATATGTEVAGAAATDITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTS
GTQAVGAIGGTAGDTYNLTINGVAIYTNLDVATALTNSDLRDAINGVSNQTGVVASLNGGNMTLTAADGRNITVTESGTG
FTAGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANIGLSANISKDTVGIDSLDVSTASGAQTAIKRIDAALNSVNS
NRANMGALQNRFESTIANLQNVSDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLLGR

Sequences:

>Translated_475_residues
MAQVINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQAVRNANDGISLSQVAEG
AMQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSELERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFS
IGSIKASSIGGIATATGTEVAGAAATDITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTS
GTQAVGAIGGTAGDTYNLTINGVAIYTNLDVATALTNSDLRDAINGVSNQTGVVASLNGGNMTLTAADGRNITVTESGTG
FTAGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANIGLSANISKDTVGIDSLDVSTASGAQTAIKRIDAALNSVNS
NRANMGALQNRFESTIANLQNVSDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLLGR
>Mature_474_residues
AQVINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQAVRNANDGISLSQVAEGA
MQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSELERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSI
GSIKASSIGGIATATGTEVAGAAATDITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTSG
TQAVGAIGGTAGDTYNLTINGVAIYTNLDVATALTNSDLRDAINGVSNQTGVVASLNGGNMTLTAADGRNITVTESGTGF
TAGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANIGLSANISKDTVGIDSLDVSTASGAQTAIKRIDAALNSVNSN
RANMGALQNRFESTIANLQNVSDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLLGR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=172, Percent_Identity=53.4883720930233, Blast_Score=169, Evalue=3e-43,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 47888; Mature: 47757

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRG
CCCEECCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
MNQAVRNANDGISLSQVAEGAMQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLK
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHH
SELERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSIGSIKASSIGGIATATGTEV
HHHHHHHHCCCCCCCEEECCCCCCCEEEECCCCCCEEEEEECCEEECCCCCEEECCCCCC
AGAAATDITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTS
CCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEECCC
GTQAVGAIGGTAGDTYNLTINGVAIYTNLDVATALTNSDLRDAINGVSNQTGVVASLNGG
CCCCCEECCCCCCCEEEEEEEEEEEEECCCHHHHHCCHHHHHHHHCCCCCCCEEEEECCC
NMTLTAADGRNITVTESGTGFTAGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANI
EEEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCCHHHCEEEEEEEEEEEECCEEEEC
GLSANISKDTVGIDSLDVSTASGAQTAIKRIDAALNSVNSNRANMGALQNRFESTIANLQ
CEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
NVSDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLLGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure 
AQVINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRG
CCEECCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
MNQAVRNANDGISLSQVAEGAMQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLK
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHH
SELERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSIGSIKASSIGGIATATGTEV
HHHHHHHHCCCCCCCEEECCCCCCCEEEECCCCCCEEEEEECCEEECCCCCEEECCCCCC
AGAAATDITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTS
CCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEECCC
GTQAVGAIGGTAGDTYNLTINGVAIYTNLDVATALTNSDLRDAINGVSNQTGVVASLNGG
CCCCCEECCCCCCCEEEEEEEEEEEEECCCHHHHHCCHHHHHHHHCCCCCCCEEEEECCC
NMTLTAADGRNITVTESGTGFTAGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANI
EEEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCCHHHCEEEEEEEEEEEECCEEEEC
GLSANISKDTVGIDSLDVSTASGAQTAIKRIDAALNSVNSNRANMGALQNRFESTIANLQ
CEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
NVSDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLLGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8562027 [H]