Click here to switch to the map view.

The map label for this gene is ybjT [C]

Identifier: 148358843

GI number: 148358843

Start: 1508929

End: 1510227

Strand: Reverse

Name: ybjT [C]

Synonym: LPC_0726

Alternate gene names: 148358843

Gene position: 1510227-1508929 (Counterclockwise)

Preceding gene: 148358851

Following gene: 148358842

Centisome position: 42.23

GC content: 36.8

Gene sequence:

>1299_bases
ATGAAAATTCTGGTAACAGGCGCATCTGGTTTTATCGCTTCACAGTTTGTTACCGATCTGCTGATTGCTGGACATGAAAT
CATTTGTTGTGTACGGAATACCAAACACACGCAAAGGATTTTTCCTGGGGCACAAGTTATCTTTTGTGATTTTATCAATG
ATACAAAACCTGAAATTTGGTCAAAAAGATTGCAGGGGATTGATGTGGTTATTAATTGTGTAGGGATTTTATACCACCCT
GATGAGAGAATCATATGGAATGTCCATTATGAAACTCCAAAAGCACTTTTTGATGCGTGTATAAACTCTGGGGTAAAAAA
AATTATTCAAATCTCTGCTTTGGGAATTGATAAAGTTGATGTGAGTTATGCTACGAGTAAAAAAGCGATAGATGATTACT
TACTGACACTCTCTATCCCGTCAATTATAGTAAGGCCCTCTTATGTGTATGGAAAAGGCTCTTATGGAGGGTCTTCTCTA
TTCAGAGGGATTGCTGGAACACCTTTTTTTACCGCTATACCTGGGCAAGGGACACAAAAATTTCAACCTATCTCTCTAAA
TGACCTATCTCAGGCAATAGTACGATTGGTGAGTACGCCTGTAACCGAAACTATTATTTTGCATGCCGTAAGCAAAAAAA
TAATCACGCTAGAAGAAATAATAATAAAACTGCGTTCCTGGCTTGGGTTCACCAAAACCAGAATAATACATATTCCATTG
ACATTTATTCGACTATTGACCCGACTTGGTGATTTGCTCCCCTATTCAACTATAAATACTGTTTCGTATAAAATGCTTGC
CAGTGATAACATTACTACTCAGGAAGAAACACAGCGATTTGCTGATTATGTTAACTTTACTCCAAGAGACTATGAAGAAG
GTCTCTATAGTCAACCGAGTTCAGTCCAAGACCATTGGCATGCGCAATTATACTTTCTTAAACTTCCCCTAAGACTCGGA
ATATCCTTTGTCTGGATTTGGACAGCCTTATGTTGTTTGTTTTTTTACCCTAAAAGTGACTCATTATCTTTGTTTGCTCA
AATAGGTTTTTCATCCTTATGGCAGTTATTCTTATTTTATGCTTCAGCTTTATGGGATGGCCTTTTAGGTATAGCCATGT
TGTTTAATTATCGATTTAAATTGACCAGTATATTGCAACTGATTACGATTTTGGTATATACGCTGATTATTACCATCAAA
CTGCCTTACCTTTGGTTAGATCCATTTGCTCCCATAGCCAAGAACATTCCTTTGTTAATAGCTATTTTAATAGGTCTGGG
TTTGGAGTCTGATAAATAA

Upstream 100 bases:

>100_bases
GTGTTGATTAAAATTAATCCTGGTAAGGAAATTTGAATAGTAGGAGTTAAATTCGTTATAGTATTTCTATTATAATTGTA
ATCAAAAATAAGAGATCCTT

Downstream 100 bases:

>100_bases
TGCTCTATTTCTATTTAAAGTTTATCCACGTGTTGAGTTCAACGATACTTTTTGGTACAGGCATAGGAACAGCAAGTGTG
ATGATTTATGGCCATAGAAC

Product: oxidoreductase

Products: NA

Alternate protein names: Oxidoreductase Protein; NADH Dehydrogenase; Nucleoside-Diphosphate-Sugar Epimerase; DTDP-4-Dehydrorhamnose Reductase; NADH-Ubiquinone Oxidoreductase; Oxidoreductase; Transmembrane Protein; NAD Dependent Epimerase/Dehydratase Family; Nucleoside-Diphosphate-Sugar Epimerase Protein

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MKILVTGASGFIASQFVTDLLIAGHEIICCVRNTKHTQRIFPGAQVIFCDFINDTKPEIWSKRLQGIDVVINCVGILYHP
DERIIWNVHYETPKALFDACINSGVKKIIQISALGIDKVDVSYATSKKAIDDYLLTLSIPSIIVRPSYVYGKGSYGGSSL
FRGIAGTPFFTAIPGQGTQKFQPISLNDLSQAIVRLVSTPVTETIILHAVSKKIITLEEIIIKLRSWLGFTKTRIIHIPL
TFIRLLTRLGDLLPYSTINTVSYKMLASDNITTQEETQRFADYVNFTPRDYEEGLYSQPSSVQDHWHAQLYFLKLPLRLG
ISFVWIWTALCCLFFYPKSDSLSLFAQIGFSSLWQLFLFYASALWDGLLGIAMLFNYRFKLTSILQLITILVYTLIITIK
LPYLWLDPFAPIAKNIPLLIAILIGLGLESDK

Sequences:

>Translated_432_residues
MKILVTGASGFIASQFVTDLLIAGHEIICCVRNTKHTQRIFPGAQVIFCDFINDTKPEIWSKRLQGIDVVINCVGILYHP
DERIIWNVHYETPKALFDACINSGVKKIIQISALGIDKVDVSYATSKKAIDDYLLTLSIPSIIVRPSYVYGKGSYGGSSL
FRGIAGTPFFTAIPGQGTQKFQPISLNDLSQAIVRLVSTPVTETIILHAVSKKIITLEEIIIKLRSWLGFTKTRIIHIPL
TFIRLLTRLGDLLPYSTINTVSYKMLASDNITTQEETQRFADYVNFTPRDYEEGLYSQPSSVQDHWHAQLYFLKLPLRLG
ISFVWIWTALCCLFFYPKSDSLSLFAQIGFSSLWQLFLFYASALWDGLLGIAMLFNYRFKLTSILQLITILVYTLIITIK
LPYLWLDPFAPIAKNIPLLIAILIGLGLESDK
>Mature_432_residues
MKILVTGASGFIASQFVTDLLIAGHEIICCVRNTKHTQRIFPGAQVIFCDFINDTKPEIWSKRLQGIDVVINCVGILYHP
DERIIWNVHYETPKALFDACINSGVKKIIQISALGIDKVDVSYATSKKAIDDYLLTLSIPSIIVRPSYVYGKGSYGGSSL
FRGIAGTPFFTAIPGQGTQKFQPISLNDLSQAIVRLVSTPVTETIILHAVSKKIITLEEIIIKLRSWLGFTKTRIIHIPL
TFIRLLTRLGDLLPYSTINTVSYKMLASDNITTQEETQRFADYVNFTPRDYEEGLYSQPSSVQDHWHAQLYFLKLPLRLG
ISFVWIWTALCCLFFYPKSDSLSLFAQIGFSSLWQLFLFYASALWDGLLGIAMLFNYRFKLTSILQLITILVYTLIITIK
LPYLWLDPFAPIAKNIPLLIAILIGLGLESDK

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48709; Mature: 48709

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVTGASGFIASQFVTDLLIAGHEIICCVRNTKHTQRIFPGAQVIFCDFINDTKPEIW
CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCEEEEEECCCCCCHHHH
SKRLQGIDVVINCVGILYHPDERIIWNVHYETPKALFDACINSGVKKIIQISALGIDKVD
HHHHCCHHHHEEHHHHEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VSYATSKKAIDDYLLTLSIPSIIVRPSYVYGKGSYGGSSLFRGIAGTPFFTAIPGQGTQK
CHHHHHHHHHHHHHHEEECCHHEECCCEEEECCCCCHHHHHHHCCCCCCEEECCCCCCCC
FQPISLNDLSQAIVRLVSTPVTETIILHAVSKKIITLEEIIIKLRSWLGFTKTRIIHIPL
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECH
TFIRLLTRLGDLLPYSTINTVSYKMLASDNITTQEETQRFADYVNFTPRDYEEGLYSQPS
HHHHHHHHHHHHCCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCC
SVQDHWHAQLYFLKLPLRLGISFVWIWTALCCLFFYPKSDSLSLFAQIGFSSLWQLFLFY
CHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH
ASALWDGLLGIAMLFNYRFKLTSILQLITILVYTLIITIKLPYLWLDPFAPIAKNIPLLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCHHHH
AILIGLGLESDK
HHHHHCCCCCCC
>Mature Secondary Structure
MKILVTGASGFIASQFVTDLLIAGHEIICCVRNTKHTQRIFPGAQVIFCDFINDTKPEIW
CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCEEEEEECCCCCCHHHH
SKRLQGIDVVINCVGILYHPDERIIWNVHYETPKALFDACINSGVKKIIQISALGIDKVD
HHHHCCHHHHEEHHHHEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VSYATSKKAIDDYLLTLSIPSIIVRPSYVYGKGSYGGSSLFRGIAGTPFFTAIPGQGTQK
CHHHHHHHHHHHHHHEEECCHHEECCCEEEECCCCCHHHHHHHCCCCCCEEECCCCCCCC
FQPISLNDLSQAIVRLVSTPVTETIILHAVSKKIITLEEIIIKLRSWLGFTKTRIIHIPL
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECH
TFIRLLTRLGDLLPYSTINTVSYKMLASDNITTQEETQRFADYVNFTPRDYEEGLYSQPS
HHHHHHHHHHHHCCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCC
SVQDHWHAQLYFLKLPLRLGISFVWIWTALCCLFFYPKSDSLSLFAQIGFSSLWQLFLFY
CHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH
ASALWDGLLGIAMLFNYRFKLTSILQLITILVYTLIITIKLPYLWLDPFAPIAKNIPLLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCHHHH
AILIGLGLESDK
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA