Click here to switch to the map view.

The map label for this gene is yerC [H]

Identifier: 148358787

GI number: 148358787

Start: 1451355

End: 1451651

Strand: Reverse

Name: yerC [H]

Synonym: LPC_0668

Alternate gene names: 148358787

Gene position: 1451651-1451355 (Counterclockwise)

Preceding gene: 148358791

Following gene: 148358786

Centisome position: 40.59

GC content: 42.09

Gene sequence:

>297_bases
ATGAAAATACATGGATCTTTTAAAAAATCTGCGCTGCCTAACTTGATGCAAGCCATCAGCTTGCTTAAAAACGAAGACGA
AGCCATGCGGTTTTTTACAGACTTATGTACTCCTGCCGAACTAGAATCTATGGCTGATCGATGGCAAGTAGTTCCTTTGC
TACGTCAGGGAATCCCTTACAGAACGATACATGAAGAAACAGGGGTCAGTGTAACAACCATCACGCGAGTTGCTCGTTGT
TTAAGCTTTGGTACAGGTGGTTATCGTTTAATAGCTGAAAGATTGGAGAAGTTGTGA

Upstream 100 bases:

>100_bases
ATACTCTACCCTATCCAGATTTTTTTTTCACTAACTTATTGACAATGATAAATAGAATCATTATCATCATTAATATGTTA
CAACACGCTAATACATTAAT

Downstream 100 bases:

>100_bases
AAAATCGTTTACGTCTGGCCTTGCAAAAAAAAGGTCGATTAGCAGATGAGTCTTTAAATCTCCTACAACGTTGTGGTTTA
AAATTTCGCATTAAGCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MKIHGSFKKSALPNLMQAISLLKNEDEAMRFFTDLCTPAELESMADRWQVVPLLRQGIPYRTIHEETGVSVTTITRVARC
LSFGTGGYRLIAERLEKL

Sequences:

>Translated_98_residues
MKIHGSFKKSALPNLMQAISLLKNEDEAMRFFTDLCTPAELESMADRWQVVPLLRQGIPYRTIHEETGVSVTTITRVARC
LSFGTGGYRLIAERLEKL
>Mature_98_residues
MKIHGSFKKSALPNLMQAISLLKNEDEAMRFFTDLCTPAELESMADRWQVVPLLRQGIPYRTIHEETGVSVTTITRVARC
LSFGTGGYRLIAERLEKL

Specific function: Unknown

COG id: COG4496

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000831
- InterPro:   IPR010921
- InterPro:   IPR013368 [H]

Pfam domain/function: PF01371 Trp_repressor [H]

EC number: NA

Molecular weight: Translated: 11098; Mature: 11098

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHGSFKKSALPNLMQAISLLKNEDEAMRFFTDLCTPAELESMADRWQVVPLLRQGIPY
CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
RTIHEETGVSVTTITRVARCLSFGTGGYRLIAERLEKL
CHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKIHGSFKKSALPNLMQAISLLKNEDEAMRFFTDLCTPAELESMADRWQVVPLLRQGIPY
CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
RTIHEETGVSVTTITRVARCLSFGTGGYRLIAERLEKL
CHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969499; 9701819; 9384377 [H]