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The map label for this gene is tnpA [H]

Identifier: 148358695

GI number: 148358695

Start: 1347184

End: 1348143

Strand: Reverse

Name: tnpA [H]

Synonym: LPC_0573

Alternate gene names: 148358695

Gene position: 1348143-1347184 (Counterclockwise)

Preceding gene: 148358697

Following gene: 148360205

Centisome position: 37.69

GC content: 38.96

Gene sequence:

>960_bases
TTGTATTGTTATGCGTGTGGTCGTTATGGAAATCAACAATTCCCCGGTATTAATAAACATCAACGTGCTACTTGGCGAGT
TCAGGCGGCGGTGTTTCATGAGCATAGCCGAGGAGTATCTCAAAAAGACTTATCAGAACGTTATAAGAAAGGCAAAGCGA
CCATAGAACGTTGGTATCAACGTCACTATGAAGAACAACATAGAGAACTACTGAATAAGCCCTGTCCTGTAGTGCTTGGT
ATTGATGAACATTTCTTCAGTAAGAAAGAGGGTTTTGCTACTACGTTATGTGACCTGAGAAAGCAAAAGGTCTTTGATGT
AGTTCGTGGCCGAAGTGAAGGGGATTTAAAAGACTATCTGCAGCAGCTGCCTGGAAAAGAACGAGTTAAAGTGATCTGTA
TGGACTTAAGCAGTACCTATCGGTCTATTGTAAAAAAATACTTTCCTAATGCAATGATAGTTGCCGATAGATTCCATGTA
ATCCGTTTAATTCAACATCAATGTATGATGACTTATAGAGAACTCTCCAGCGACATAAAAAGTAATAGGGGCATCTTAGC
TTTATTAAGAACTAGACCAGATAACTTGACTGAAGAAAAGAAGGCTAAAAGAGATGCATTTTTAACTCAAAATCCTGCTA
TTGAAGCCATCTATCAATTTCAGCAAGAGCTTCATTCTCTGTTAATGAAAAGAGCTTTAACTCAACGTGCATGCCGTAAA
GTAATCCCTACATTCTTGGATATGCTAGCTGAATTAAAACAGAGCACCTTTAAAGCGTTAGCATCATTAGGAAAAACGCT
TAGTGCTTGGAAAGATGAAGTCGCCAGAATGTGGCGGTTTAGTAAATCTAATGGAATAACTGAAGGCTTTCATCGCAAAA
TGAAACTCATTCAGCGAAGGGCTTATGGTTTTAGAAATTTTGAAAATTATAGAGTGCGTGTTAGGGTGCTCTGCGGGTGA

Upstream 100 bases:

>100_bases
TCAAAGTAAGAAAGTACGGAAGAAAGCATCGTATATACGAAGAGTTCATCATGAACTAATAGGTCATAGGCGAAGTATAT
TAAGGTTTAAAGCGTATAAG

Downstream 100 bases:

>100_bases
TTAAAGACTGCCCCCTTAAATGGGAAAGAGCCAGAATACGCAACTTACTGATTTCAAAGGGGTTTTGATGGTCGGGACGG
AAGGATTTGAACCTTCGACC

Product: TnpA transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MYCYACGRYGNQQFPGINKHQRATWRVQAAVFHEHSRGVSQKDLSERYKKGKATIERWYQRHYEEQHRELLNKPCPVVLG
IDEHFFSKKEGFATTLCDLRKQKVFDVVRGRSEGDLKDYLQQLPGKERVKVICMDLSSTYRSIVKKYFPNAMIVADRFHV
IRLIQHQCMMTYRELSSDIKSNRGILALLRTRPDNLTEEKKAKRDAFLTQNPAIEAIYQFQQELHSLLMKRALTQRACRK
VIPTFLDMLAELKQSTFKALASLGKTLSAWKDEVARMWRFSKSNGITEGFHRKMKLIQRRAYGFRNFENYRVRVRVLCG

Sequences:

>Translated_319_residues
MYCYACGRYGNQQFPGINKHQRATWRVQAAVFHEHSRGVSQKDLSERYKKGKATIERWYQRHYEEQHRELLNKPCPVVLG
IDEHFFSKKEGFATTLCDLRKQKVFDVVRGRSEGDLKDYLQQLPGKERVKVICMDLSSTYRSIVKKYFPNAMIVADRFHV
IRLIQHQCMMTYRELSSDIKSNRGILALLRTRPDNLTEEKKAKRDAFLTQNPAIEAIYQFQQELHSLLMKRALTQRACRK
VIPTFLDMLAELKQSTFKALASLGKTLSAWKDEVARMWRFSKSNGITEGFHRKMKLIQRRAYGFRNFENYRVRVRVLCG
>Mature_319_residues
MYCYACGRYGNQQFPGINKHQRATWRVQAAVFHEHSRGVSQKDLSERYKKGKATIERWYQRHYEEQHRELLNKPCPVVLG
IDEHFFSKKEGFATTLCDLRKQKVFDVVRGRSEGDLKDYLQQLPGKERVKVICMDLSSTYRSIVKKYFPNAMIVADRFHV
IRLIQHQCMMTYRELSSDIKSNRGILALLRTRPDNLTEEKKAKRDAFLTQNPAIEAIYQFQQELHSLLMKRALTQRACRK
VIPTFLDMLAELKQSTFKALASLGKTLSAWKDEVARMWRFSKSNGITEGFHRKMKLIQRRAYGFRNFENYRVRVRVLCG

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 37570; Mature: 37570

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYCYACGRYGNQQFPGINKHQRATWRVQAAVFHEHSRGVSQKDLSERYKKGKATIERWYQ
CCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RHYEEQHRELLNKPCPVVLGIDEHFFSKKEGFATTLCDLRKQKVFDVVRGRSEGDLKDYL
HHHHHHHHHHHCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
QQLPGKERVKVICMDLSSTYRSIVKKYFPNAMIVADRFHVIRLIQHQCMMTYRELSSDIK
HHCCCCCHHEEEEEHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
SNRGILALLRTRPDNLTEEKKAKRDAFLTQNPAIEAIYQFQQELHSLLMKRALTQRACRK
CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIPTFLDMLAELKQSTFKALASLGKTLSAWKDEVARMWRFSKSNGITEGFHRKMKLIQRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AYGFRNFENYRVRVRVLCG
HHCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MYCYACGRYGNQQFPGINKHQRATWRVQAAVFHEHSRGVSQKDLSERYKKGKATIERWYQ
CCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RHYEEQHRELLNKPCPVVLGIDEHFFSKKEGFATTLCDLRKQKVFDVVRGRSEGDLKDYL
HHHHHHHHHHHCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
QQLPGKERVKVICMDLSSTYRSIVKKYFPNAMIVADRFHVIRLIQHQCMMTYRELSSDIK
HHCCCCCHHEEEEEHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
SNRGILALLRTRPDNLTEEKKAKRDAFLTQNPAIEAIYQFQQELHSLLMKRALTQRACRK
CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIPTFLDMLAELKQSTFKALASLGKTLSAWKDEVARMWRFSKSNGITEGFHRKMKLIQRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AYGFRNFENYRVRVRVLCG
HHCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]