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The map label for this gene is parB [H]

Identifier: 148358676

GI number: 148358676

Start: 3100428

End: 3101219

Strand: Reverse

Name: parB [H]

Synonym: LPC_0552

Alternate gene names: 148358676

Gene position: 3101219-3100428 (Counterclockwise)

Preceding gene: 148358675

Following gene: 148358677

Centisome position: 86.71

GC content: 40.4

Gene sequence:

>792_bases
ATGCAAACCCGATTTACTTATTTACCTGTCACAAGCCTGCAGGCAGGTCAGTATCAACCCAGGCAAGATTTTAATGTAAC
GGAGTTACAGGAATTGGCTCAGTCAATTTCTTCCCAGGGTTTAATTGAACCTTTGGTGGTAAGACCCATAGCAAAAGAGC
GATATGAAATTATTGCAGGGGAAAGAAGGTGGCGTGCGGCCAAATTGGCGGGATTAAATGAAGTCCCTTGTTTGATTGGA
GATTATAGTGATCAACAGGCATGTGCTCTCACTTTAATCGAAAATATTCAACGTCAGGATTTGAATTTAATCGAGGAAGC
CACTGGTTATAAGCGTTTAATTGAAGAATTCCATTATCATCAGGACGAGATCGCTGCGTTGGTAGGTAAATCTCGTAGCC
ATGTCGCAAATATTCTTCGTCTCCTTACCTTGACAGATAAGGTTAAACAGTTGGTTCGAGACAAAGCGTTATCCTTTGGC
CATGCTCGTGTATTGGTTGGCTTAAATCCTGAAACACCAGAATGTTTTGCTCACCAGATTATTGGAGAGGAATGGTCTGT
CAGACACTTAGAGCAAGAAATTAAATTTTATAAAAATAAAGATATGAATAGCCCAAAAAATCCCAGAAAAGACAGAGATA
TTGAGCGGTTACAGACTATCTTGGCTGAACAAGTGGGAGCTCCTGTACAAATTATAAACGATGGCGAAGACGGAGGTTGG
TTAAAAGTAAAATTTTTTGATAATGATACCCTTGCAGGGCTTTTGGAGCGTTTGGGCTTGAGATATGATTAG

Upstream 100 bases:

>100_bases
TTTCAGGGTTTTTCTTTGTGGCCAGATAAACCGGATACAATTCCATTTCAGGCACTATTGTGAAACAATTTCATATTCTT
AAGTTTCTTGATTTTTTCCT

Downstream 100 bases:

>100_bases
CTTATCGGAACTAACTCAGAAATTGTCACTATGTATCAAACAATTCAAACTGGTTTATATTGTGAAATTCAATGTTAAGG
AAAATATTTAAATGAAAAGG

Product: chromosome partitioning protein ParB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MQTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAGERRWRAAKLAGLNEVPCLIG
DYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYHQDEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKALSFG
HARVLVGLNPETPECFAHQIIGEEWSVRHLEQEIKFYKNKDMNSPKNPRKDRDIERLQTILAEQVGAPVQIINDGEDGGW
LKVKFFDNDTLAGLLERLGLRYD

Sequences:

>Translated_263_residues
MQTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAGERRWRAAKLAGLNEVPCLIG
DYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYHQDEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKALSFG
HARVLVGLNPETPECFAHQIIGEEWSVRHLEQEIKFYKNKDMNSPKNPRKDRDIERLQTILAEQVGAPVQIINDGEDGGW
LKVKFFDNDTLAGLLERLGLRYD
>Mature_263_residues
MQTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAGERRWRAAKLAGLNEVPCLIG
DYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYHQDEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKALSFG
HARVLVGLNPETPECFAHQIIGEEWSVRHLEQEIKFYKNKDMNSPKNPRKDRDIERLQTILAEQVGAPVQIINDGEDGGW
LKVKFFDNDTLAGLLERLGLRYD

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 30078; Mature: 30078

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAG
CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
ERRWRAAKLAGLNEVPCLIGDYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYH
CHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QDEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKALSFGHARVLVGLNPETPECFAHQI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH
IGEEWSVRHLEQEIKFYKNKDMNSPKNPRKDRDIERLQTILAEQVGAPVQIINDGEDGGW
HCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCE
LKVKFFDNDTLAGLLERLGLRYD
EEEEEECCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MQTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAG
CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
ERRWRAAKLAGLNEVPCLIGDYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYH
CHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QDEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKALSFGHARVLVGLNPETPECFAHQI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH
IGEEWSVRHLEQEIKFYKNKDMNSPKNPRKDRDIERLQTILAEQVGAPVQIINDGEDGGW
HCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCE
LKVKFFDNDTLAGLLERLGLRYD
EEEEEECCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232; 9683477 [H]