| Definition | Legionella pneumophila str. Corby chromosome, complete genome. |
|---|---|
| Accession | NC_009494 |
| Length | 3,576,470 |
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The map label for this gene is 148358621
Identifier: 148358621
GI number: 148358621
Start: 3167167
End: 3168441
Strand: Direct
Name: 148358621
Synonym: LPC_0495
Alternate gene names: NA
Gene position: 3167167-3168441 (Clockwise)
Preceding gene: 148358622
Following gene: 148358617
Centisome position: 88.56
GC content: 51.14
Gene sequence:
>1275_bases ATGATACATCGAAATAAAGTCCTTAATAGCATTTTATTAATCTTATTCACATCACAGATGGCATTTGCCAAAAGCAATCC GGCCTCGCAAGCCTATGTGGATGGCAAGGTATCTGAATTAAAAAATGAATTAACCAACAAAATCAACAGTATCCCCTCCG GACCTCAGGGATTACCAGGCCCTAAAGGAGACAGAGGAGAGGCAGGACCTCAGGGATTACCCGGACCGAAAGGAGACCGA GGGGAGGCAGGGCCTCAGGGATTACCCGGCCCTAAAGGAGACCGAGGGGAGGCAGGGCCTCAGGGATTACCCGGACCGAA AGGAGACCAAGGGGAAGCAGGACCTCAGGGATTACCCGGGCCGAAAGGAGACCGAGGGGAGGCAGGACCTCAGGGATTAC CCGGACCGAAAGGAGACATAGGGGAGGCAGGGCCGCAGGGATTACCCGGCCCTAAAGGAGACCGAGGGGAAGCAGGACCT CAGGGATTACCCGGACCGAAAGGAGACCAAGGGGAAGCAGGACCTCAGGGATTACCAGGACCGAAAGGAGACCGAGGGGA GGCAGGACCTCAGGGATTACCTGGACCGAAAGGAGACCGAGGGGAGGCAGGACCTCAGGGATTACCCGGACCGAAAGGAG ACCGAGGAGAGGCAGGACCTCAGGGATTACCCGGTCCGAAAGGAGACAGAGGAGAGGCAGGACCTCAGGGATTACCAGGC CCTAAAGGAGACAAAGGAGAAACAGGAGCAGTAGGTCCGCAAGGTATGCCAGGACCTAAAGGCGAAGCAGGAGATGACGG CCAAGGTGTGCCTGCAGGTGGTGAAACGGGTCAAGTCCTTGCCAAATCAAATGACCTCGATTTCAATACCGTGTGGGTTG ACCCGGCAAATTCCGGCATTAGGCGGCAATTAGGCGATAAAGCTCTTGGCGGTACAGTAATTTATGTTAATGCGCTAGGT ACCCATGGGCTTGTAGTAGCAAATTCAGATCAAGTTAATTCAAACACATGGTGGGATGCTCAAGATTCCATAACCAATCC TGCCCACTTTGACAATGAAGGTAAATTATATTCTGACTGGAGGCTCCCTAGCCGTTTTGAATTGAATTTAATTTATATGA TGCGTGATGAGCTGGGAAATTTTTTGGCAGGTAATTACTGGAGTTCCATTGAAAAATCATCGGCAAACAGCTGGGTATTT AATTCTAAAACAGGGGAAATTAAAGACATTGCAAAAAGTAAAACGGCTGCTGTACGTGCTGTAAGAGCCTTTTAA
Upstream 100 bases:
>100_bases GAGAAGTCAGATTTACAAGCAGTAAATGAGTACCGCAGAAACGCTTGTAACGCAGCAGTAAAATAAAAGAGACAAGTGAG CATATAGTGGGAAATAAAGA
Downstream 100 bases:
>100_bases GTATGGCAAAGCTTCAATTTTGATCAAGGGTGGAAATGTTCATAAATTCGCTTTGCCAACTGCTCGTTGATTCCCTGGAC TTTACAAATTTCTTCCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Collagen Triple Helix Repeat Protein; Collagen-Like Surface Protein; Collagen Triple Helix Repeat Domain Protein; Collagen-Like Protein; Collagen-Like; Collagen Triple Helix Repeat-Containing Protein; Tail Fiber Protein; GXT Repeat-Containing Collagen-Like Protein; Exosporium Glycoprotein; Group-Specific Protein; Tail Fiber Protein Prophage; Collagen Triple Helix Repeat Domain-Containing Protein; SclB Protein; Collagen-Like Surface-Anchored Protein SclE; BclA Protein; Collagen-Like Surface-Anchored Protein SclC; G5 Domain Family; Phage Tail Collar; Glycine-Rich Cell Wall Surface Anchor Protein; Cell-Surface Large Adhesin; Collagen Like Protein; Collagen Alpha 2(I) Chain; Collagen-Like Cell Surface-Anchored Protein SclH; Collagen-Like Surface; Exosporium Protein; Cell Surface-Anchored Protein SclG; Copper Amine Oxidase Domain Protein; Large Adhesin; YSIRK Type Signal Peptide; Collagen-Like Cell Surface-Anchored Protein SclF; Cell Surface-Anchored Protein; Collagen-Like Surface-Anchored Protein SclF; Cell Surface-Anchored Protein SclH; Collagen-Like Surface Protei; Collagen Triple Helix Repeat; Collagen Triple Helix Repeat Tail Fiber Protein Prophage; Cell Surface-Anchored Protein SclI; Collagen-Like Triple Helix Repeat Protein; Ollagen-Like Protein SclZ.; Cell Wall Surface Anchor Family Protein; Collagen-Like Protein SclB; YVTN Beta-Propeller Repeat-Containing Protein; Collagen-Like Surface-Anchored Protein SclG; Collagen-Like Surface Protein A; Collagen-Like Surface-Anchored Protein SclI
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MIHRNKVLNSILLILFTSQMAFAKSNPASQAYVDGKVSELKNELTNKINSIPSGPQGLPGPKGDRGEAGPQGLPGPKGDR GEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDIGEAGPQGLPGPKGDRGEAGP QGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPG PKGDKGETGAVGPQGMPGPKGEAGDDGQGVPAGGETGQVLAKSNDLDFNTVWVDPANSGIRRQLGDKALGGTVIYVNALG THGLVVANSDQVNSNTWWDAQDSITNPAHFDNEGKLYSDWRLPSRFELNLIYMMRDELGNFLAGNYWSSIEKSSANSWVF NSKTGEIKDIAKSKTAAVRAVRAF
Sequences:
>Translated_424_residues MIHRNKVLNSILLILFTSQMAFAKSNPASQAYVDGKVSELKNELTNKINSIPSGPQGLPGPKGDRGEAGPQGLPGPKGDR GEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDIGEAGPQGLPGPKGDRGEAGP QGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPG PKGDKGETGAVGPQGMPGPKGEAGDDGQGVPAGGETGQVLAKSNDLDFNTVWVDPANSGIRRQLGDKALGGTVIYVNALG THGLVVANSDQVNSNTWWDAQDSITNPAHFDNEGKLYSDWRLPSRFELNLIYMMRDELGNFLAGNYWSSIEKSSANSWVF NSKTGEIKDIAKSKTAAVRAVRAF >Mature_424_residues MIHRNKVLNSILLILFTSQMAFAKSNPASQAYVDGKVSELKNELTNKINSIPSGPQGLPGPKGDRGEAGPQGLPGPKGDR GEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDIGEAGPQGLPGPKGDRGEAGP QGLPGPKGDQGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPG PKGDKGETGAVGPQGMPGPKGEAGDDGQGVPAGGETGQVLAKSNDLDFNTVWVDPANSGIRRQLGDKALGGTVIYVNALG THGLVVANSDQVNSNTWWDAQDSITNPAHFDNEGKLYSDWRLPSRFELNLIYMMRDELGNFLAGNYWSSIEKSSANSWVF NSKTGEIKDIAKSKTAAVRAVRAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI5803080, Length=216, Percent_Identity=48.6111111111111, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI115392133, Length=232, Percent_Identity=47.4137931034483, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI183583553, Length=228, Percent_Identity=42.1052631578947, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI18780273, Length=217, Percent_Identity=46.5437788018433, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI4502961, Length=275, Percent_Identity=43.6363636363636, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI115527062, Length=299, Percent_Identity=38.4615384615385, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI32140760, Length=423, Percent_Identity=34.7517730496454, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI115527070, Length=299, Percent_Identity=38.4615384615385, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI115527066, Length=299, Percent_Identity=38.4615384615385, Blast_Score=109, Evalue=5e-24, Organism=Homo sapiens, GI111118970, Length=273, Percent_Identity=44.3223443223443, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI111118968, Length=273, Percent_Identity=44.3223443223443, Blast_Score=106, Evalue=5e-23, Organism=Homo sapiens, GI111118972, Length=273, Percent_Identity=44.3223443223443, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI56847616, Length=174, Percent_Identity=44.8275862068966, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI122937273, Length=226, Percent_Identity=42.9203539823009, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI148536825, Length=236, Percent_Identity=47.8813559322034, Blast_Score=105, Evalue=8e-23, Organism=Homo sapiens, GI73486666, Length=237, Percent_Identity=45.1476793248945, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI65301115, Length=174, Percent_Identity=44.8275862068966, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI156616290, Length=258, Percent_Identity=41.0852713178295, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI89363017, Length=271, Percent_Identity=43.1734317343173, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI299523257, Length=271, Percent_Identity=39.4833948339483, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI98985810, Length=271, Percent_Identity=39.4833948339483, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI98985806, Length=295, Percent_Identity=40, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI299523253, Length=295, Percent_Identity=40, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI40805823, Length=226, Percent_Identity=42.4778761061947, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI119508426, Length=231, Percent_Identity=45.4545454545455, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI110735435, Length=269, Percent_Identity=41.635687732342, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI11386161, Length=258, Percent_Identity=44.1860465116279, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI87196339, Length=322, Percent_Identity=35.7142857142857, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI55743098, Length=284, Percent_Identity=35.9154929577465, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI55743106, Length=284, Percent_Identity=35.9154929577465, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI154759255, Length=343, Percent_Identity=36.1516034985423, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI240255535, Length=284, Percent_Identity=35.9154929577465, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI4502951, Length=256, Percent_Identity=44.53125, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI119829187, Length=258, Percent_Identity=43.4108527131783, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI48762934, Length=224, Percent_Identity=45.5357142857143, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI148536823, Length=290, Percent_Identity=42.0689655172414, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI111118976, Length=256, Percent_Identity=40.625, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI73486664, Length=237, Percent_Identity=45.1476793248945, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI16357503, Length=290, Percent_Identity=42.0689655172414, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI111118974, Length=256, Percent_Identity=40.625, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI38570073, Length=223, Percent_Identity=42.6008968609865, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI116256354, Length=194, Percent_Identity=47.4226804123711, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI38570075, Length=223, Percent_Identity=42.6008968609865, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI61699226, Length=190, Percent_Identity=48.9473684210526, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI291045255, Length=298, Percent_Identity=38.9261744966443, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI110349772, Length=296, Percent_Identity=38.5135135135135, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI47778921, Length=333, Percent_Identity=36.3363363363363, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI291045253, Length=280, Percent_Identity=40.7142857142857, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI89276751, Length=240, Percent_Identity=38.3333333333333, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI29725624, Length=269, Percent_Identity=35.6877323420074, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI145701009, Length=146, Percent_Identity=45.2054794520548, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI89142730, Length=286, Percent_Identity=39.8601398601399, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI194294532, Length=292, Percent_Identity=34.5890410958904, Blast_Score=66, Evalue=5e-11, Organism=Homo sapiens, GI18105032, Length=136, Percent_Identity=50.7352941176471, Blast_Score=66, Evalue=5e-11, Organism=Homo sapiens, GI291045242, Length=292, Percent_Identity=34.5890410958904, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI291045249, Length=253, Percent_Identity=39.9209486166008, Blast_Score=65, Evalue=9e-11, Organism=Caenorhabditis elegans, GI71992048, Length=229, Percent_Identity=48.9082969432314, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI25153132, Length=260, Percent_Identity=40.7692307692308, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17535735, Length=179, Percent_Identity=45.8100558659218, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17569903, Length=204, Percent_Identity=40.6862745098039, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17568911, Length=221, Percent_Identity=47.9638009049774, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17568913, Length=221, Percent_Identity=47.9638009049774, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71988210, Length=239, Percent_Identity=43.5146443514644, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71988208, Length=239, Percent_Identity=43.5146443514644, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17553572, Length=232, Percent_Identity=38.7931034482759, Blast_Score=72, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17506917, Length=213, Percent_Identity=41.3145539906103, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17539078, Length=192, Percent_Identity=41.1458333333333, Blast_Score=68, Evalue=8e-12, Organism=Drosophila melanogaster, GI24581820, Length=365, Percent_Identity=35.0684931506849, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI24581822, Length=365, Percent_Identity=35.0684931506849, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI24581824, Length=365, Percent_Identity=35.0684931506849, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI17137252, Length=410, Percent_Identity=33.6585365853659, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI221379525, Length=229, Percent_Identity=39.3013100436681, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI221379533, Length=229, Percent_Identity=39.3013100436681, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI281361939, Length=194, Percent_Identity=38.1443298969072, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43094; Mature: 43094
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHRNKVLNSILLILFTSQMAFAKSNPASQAYVDGKVSELKNELTNKINSIPSGPQGLPG CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCCC PKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PKGDRGEAGPQGLPGPKGDIGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PKGDKGETGAVGPQGMPGPKGEAGDDGQGVPAGGETGQVLAKSNDLDFNTVWVDPANSGI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCHH RRQLGDKALGGTVIYVNALGTHGLVVANSDQVNSNTWWDAQDSITNPAHFDNEGKLYSDW HHHHCCHHCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCEEECC RLPSRFELNLIYMMRDELGNFLAGNYWSSIEKSSANSWVFNSKTGEIKDIAKSKTAAVRA CCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHH VRAF HHCC >Mature Secondary Structure MIHRNKVLNSILLILFTSQMAFAKSNPASQAYVDGKVSELKNELTNKINSIPSGPQGLPG CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCCC PKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PKGDRGEAGPQGLPGPKGDIGEAGPQGLPGPKGDRGEAGPQGLPGPKGDQGEAGPQGLPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPGPKGDRGEAGPQGLPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PKGDKGETGAVGPQGMPGPKGEAGDDGQGVPAGGETGQVLAKSNDLDFNTVWVDPANSGI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCHH RRQLGDKALGGTVIYVNALGTHGLVVANSDQVNSNTWWDAQDSITNPAHFDNEGKLYSDW HHHHCCHHCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCEEECC RLPSRFELNLIYMMRDELGNFLAGNYWSSIEKSSANSWVFNSKTGEIKDIAKSKTAAVRA CCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHH VRAF HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA