Click here to switch to the map view.

The map label for this gene is 148358602

Identifier: 148358602

GI number: 148358602

Start: 3186856

End: 3187389

Strand: Direct

Name: 148358602

Synonym: LPC_0476

Alternate gene names: NA

Gene position: 3186856-3187389 (Clockwise)

Preceding gene: 148358603

Following gene: 148358599

Centisome position: 89.11

GC content: 38.2

Gene sequence:

>534_bases
ATGATTCAAACCAATTGGTGCGTGATAACAGGTGGACCTTCCTCAGGGAAAACCACTTTAATTAATCATTTGGCAGAGTT
GGGATACAAAACTGCGCCAGAAATAGCCAGATTTTATATCAACCAGCTGCTGTCTCATGATAAAAAAACTCTACAAGAAG
TAAAACATGATATCCTTTGGTTACAAAGAAAAATTCTCAATATCATGTTAAGACGAGAAAGAAACCTGCCTAAGGACGAC
TTAATTTTTTTTGACCGTGGCACCCCGGACAGCATCGGCTATTTTCGTTTTCATCATTTAGATGAGGCTCATGTGGTCAG
AGCTTGCCAGTATTTACGCTATAAAAAAATTTTTTTCTGTCATCCCTTGCCTGTTGTCCCTGATACCATAAGAGATGAGG
ATGATGTCACCGCAAAGAAAATTAGCGATTACATTTATAATGCCTATGTTGGCCTTAACTACCCTGTCATAGAATTACCA
GCAACCTCAATAAAAGAACGCCTGGAAATTATTTTATCCCATATTGATACCTAG

Upstream 100 bases:

>100_bases
AAGCGCTTGGAATTACTGTAGAATATATTGAAGAATTCCAGGGCAGACGATTTGCCGCAGTAAAAATTGGCGATATCCGT
CTCATTGATAATTATTTGCT

Downstream 100 bases:

>100_bases
AGATAAACCTGTTCTAGGTTTTATTCAAAGCGATTGCCGCTGCAATAACCGCTGCCTTGTGCTGAGGGAAGGATTTATTT
GAATACTTTAACCATTCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: ATPase; ATPase-Like; Transcriptional Regulator; P-Loop Containing Nucleoside Triphosphate Hydrolase

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MIQTNWCVITGGPSSGKTTLINHLAELGYKTAPEIARFYINQLLSHDKKTLQEVKHDILWLQRKILNIMLRRERNLPKDD
LIFFDRGTPDSIGYFRFHHLDEAHVVRACQYLRYKKIFFCHPLPVVPDTIRDEDDVTAKKISDYIYNAYVGLNYPVIELP
ATSIKERLEIILSHIDT

Sequences:

>Translated_177_residues
MIQTNWCVITGGPSSGKTTLINHLAELGYKTAPEIARFYINQLLSHDKKTLQEVKHDILWLQRKILNIMLRRERNLPKDD
LIFFDRGTPDSIGYFRFHHLDEAHVVRACQYLRYKKIFFCHPLPVVPDTIRDEDDVTAKKISDYIYNAYVGLNYPVIELP
ATSIKERLEIILSHIDT
>Mature_177_residues
MIQTNWCVITGGPSSGKTTLINHLAELGYKTAPEIARFYINQLLSHDKKTLQEVKHDILWLQRKILNIMLRRERNLPKDD
LIFFDRGTPDSIGYFRFHHLDEAHVVRACQYLRYKKIFFCHPLPVVPDTIRDEDDVTAKKISDYIYNAYVGLNYPVIELP
ATSIKERLEIILSHIDT

Specific function: Unknown

COG id: COG3911

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20668; Mature: 20668

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQTNWCVITGGPSSGKTTLINHLAELGYKTAPEIARFYINQLLSHDKKTLQEVKHDILW
CCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQRKILNIMLRRERNLPKDDLIFFDRGTPDSIGYFRFHHLDEAHVVRACQYLRYKKIFFC
HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHEEE
HPLPVVPDTIRDEDDVTAKKISDYIYNAYVGLNYPVIELPATSIKERLEIILSHIDT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIQTNWCVITGGPSSGKTTLINHLAELGYKTAPEIARFYINQLLSHDKKTLQEVKHDILW
CCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQRKILNIMLRRERNLPKDDLIFFDRGTPDSIGYFRFHHLDEAHVVRACQYLRYKKIFFC
HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHEEE
HPLPVVPDTIRDEDDVTAKKISDYIYNAYVGLNYPVIELPATSIKERLEIILSHIDT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA