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The map label for this gene is petC [H]

Identifier: 148358560

GI number: 148358560

Start: 3232668

End: 3233411

Strand: Reverse

Name: petC [H]

Synonym: LPC_0432

Alternate gene names: 148358560

Gene position: 3233411-3232668 (Counterclockwise)

Preceding gene: 148358559

Following gene: 148358561

Centisome position: 90.41

GC content: 35.48

Gene sequence:

>744_bases
ATGAAAATAAAGGTGTTATTAGTTGCTGCATTGGCATTTTTAATATCAAACGCTGCTTTTACAGAAAATTTAACAATGGA
TTATGTACCGGTTGATATAAACGATAAAGAGAGTTTGCAAAGAGGGGCAAAGATGTTTATGAATTATTGCTCGGGATGCC
ATTCTCTCAAATACATGCGTTATAACCGCATGGCACAGGATCTTGGATTAACTACTTTTGATGGTCAGATTGCTGAGGAT
TTATTAAAAAATAACTTAATTTTTACTCAGGCCAATATTTATGATCCCATTCAAATTGCCATGTCGCCTGAAGATGCCAA
GCAATGGTTTGGTATGGTGCCCCCCGATTTGTCTTTAAGTGCACGGGATAGAGGGCCTGTTTGGATATATAATTATTTGA
AAAGTTTTTACAGCGATCCTTCCAGACCTTTTGGTGCTAATAATTTACTAATGCCTGATGTTGCTATGCCTAATGTTTTG
GAACCCTTGATTGGAAAAGTCATTTTGGTCAAAGATAAAAATTCGCATGCAAATAGTTTATTAGTGGTAAAACGAGGCGA
AATGTTTGAAGGCCAGTTTGACAGCGCATTAAGGGATTTAGTCAATTTTTTGGTTTATGTAGGTGAGCCTGCCAAGCTAA
TTCGTTATAAATTAGGAGTTTTTGTTCTTTTGTTCTTCTGTATTTTCCTTATAGCAGCTTATTCACTGAAGAAAGCTTAT
TGGAAACAATTAAAATTGGAATAG

Upstream 100 bases:

>100_bases
GAATTGCCGCTGTTATTTATTTTTCTTATTTTATCTTGATGCCTATTTATAGTCGTTTTGAGAAAACCCGGCCAGTACCT
ACACGGATAGGTGAAAAATG

Downstream 100 bases:

>100_bases
ACTGCTTACTCCTCAGCTTTGTAAAAGGTGCTACTTTTTTGCCTTTTATACAGAGTTCAATCTCAAATGGTTACCTTCAG
AATCAGAAAATATATCTGGT

Product: ubiquinol-cytochrome c reductase, cytochrome c1

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKIKVLLVAALAFLISNAAFTENLTMDYVPVDINDKESLQRGAKMFMNYCSGCHSLKYMRYNRMAQDLGLTTFDGQIAED
LLKNNLIFTQANIYDPIQIAMSPEDAKQWFGMVPPDLSLSARDRGPVWIYNYLKSFYSDPSRPFGANNLLMPDVAMPNVL
EPLIGKVILVKDKNSHANSLLVVKRGEMFEGQFDSALRDLVNFLVYVGEPAKLIRYKLGVFVLLFFCIFLIAAYSLKKAY
WKQLKLE

Sequences:

>Translated_247_residues
MKIKVLLVAALAFLISNAAFTENLTMDYVPVDINDKESLQRGAKMFMNYCSGCHSLKYMRYNRMAQDLGLTTFDGQIAED
LLKNNLIFTQANIYDPIQIAMSPEDAKQWFGMVPPDLSLSARDRGPVWIYNYLKSFYSDPSRPFGANNLLMPDVAMPNVL
EPLIGKVILVKDKNSHANSLLVVKRGEMFEGQFDSALRDLVNFLVYVGEPAKLIRYKLGVFVLLFFCIFLIAAYSLKKAY
WKQLKLE
>Mature_247_residues
MKIKVLLVAALAFLISNAAFTENLTMDYVPVDINDKESLQRGAKMFMNYCSGCHSLKYMRYNRMAQDLGLTTFDGQIAED
LLKNNLIFTQANIYDPIQIAMSPEDAKQWFGMVPPDLSLSARDRGPVWIYNYLKSFYSDPSRPFGANNLLMPDVAMPNVL
EPLIGKVILVKDKNSHANSLLVVKRGEMFEGQFDSALRDLVNFLVYVGEPAKLIRYKLGVFVLLFFCIFLIAAYSLKKAY
WKQLKLE

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 28107; Mature: 28107

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKVLLVAALAFLISNAAFTENLTMDYVPVDINDKESLQRGAKMFMNYCSGCHSLKYMR
CEEHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YNRMAQDLGLTTFDGQIAEDLLKNNLIFTQANIYDPIQIAMSPEDAKQWFGMVPPDLSLS
HHHHHHHCCCCCCCHHHHHHHHHCCEEEEECCCCCCEEEEECCHHHHHHCCCCCCCCCCC
ARDRGPVWIYNYLKSFYSDPSRPFGANNLLMPDVAMPNVLEPLIGKVILVKDKNSHANSL
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCEE
LVVKRGEMFEGQFDSALRDLVNFLVYVGEPAKLIRYKLGVFVLLFFCIFLIAAYSLKKAY
EEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WKQLKLE
HHHHCCC
>Mature Secondary Structure
MKIKVLLVAALAFLISNAAFTENLTMDYVPVDINDKESLQRGAKMFMNYCSGCHSLKYMR
CEEHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YNRMAQDLGLTTFDGQIAEDLLKNNLIFTQANIYDPIQIAMSPEDAKQWFGMVPPDLSLS
HHHHHHHCCCCCCCHHHHHHHHHCCEEEEECCCCCCEEEEECCHHHHHHCCCCCCCCCCC
ARDRGPVWIYNYLKSFYSDPSRPFGANNLLMPDVAMPNVLEPLIGKVILVKDKNSHANSL
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCEE
LVVKRGEMFEGQFDSALRDLVNFLVYVGEPAKLIRYKLGVFVLLFFCIFLIAAYSLKKAY
EEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WKQLKLE
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA