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The map label for this gene is ybzH [H]

Identifier: 148358539

GI number: 148358539

Start: 3252628

End: 3252927

Strand: Reverse

Name: ybzH [H]

Synonym: LPC_0410

Alternate gene names: 148358539

Gene position: 3252927-3252628 (Counterclockwise)

Preceding gene: 148358537

Following gene: 148358540

Centisome position: 90.95

GC content: 33.0

Gene sequence:

>300_bases
ATGAACGTAATAAATATATTAAAAGCGCTTTCTAATGAAAAGCGATTACAGATAATCAGATGGCTAAAAGAGCCAGATAA
ACATTTCAGTTCGTCGCACTGTGATGTGAGCAAAGATGGTGTTTGTGTTGGCTTAATAGAAAAAAAATCAGGCTTATCTC
AATCCACGGTATCTCAATATTTATCACAATTACAGCAAGCTGGTTTGATATTCACTGAGCGTAGAGGACAGTGGACCTAT
TGTAAAGCGAATGCAAACTTAATTAATGAATTTATAAAAGAATTGAAAGTTATGATTTAA

Upstream 100 bases:

>100_bases
TTTTAATATTAGTATCGGGCAGGTTATTTGAAATTTCAACACACATGACCATGAGCAATCACTAAATTGACATATCGCAA
TAAAACGATATAATTAAAAT

Downstream 100 bases:

>100_bases
AAAATTTTGCTTTAATAAATCGAATATTTGCAATATTCCAATATATTGTTTTGATCTGCAGGAGATTTATCATGGTTAAC
TCCGATTTAATTTTAAGTCC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MNVINILKALSNEKRLQIIRWLKEPDKHFSSSHCDVSKDGVCVGLIEKKSGLSQSTVSQYLSQLQQAGLIFTERRGQWTY
CKANANLINEFIKELKVMI

Sequences:

>Translated_99_residues
MNVINILKALSNEKRLQIIRWLKEPDKHFSSSHCDVSKDGVCVGLIEKKSGLSQSTVSQYLSQLQQAGLIFTERRGQWTY
CKANANLINEFIKELKVMI
>Mature_99_residues
MNVINILKALSNEKRLQIIRWLKEPDKHFSSSHCDVSKDGVCVGLIEKKSGLSQSTVSQYLSQLQQAGLIFTERRGQWTY
CKANANLINEFIKELKVMI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11311; Mature: 11311

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVINILKALSNEKRLQIIRWLKEPDKHFSSSHCDVSKDGVCVGLIEKKSGLSQSTVSQY
CCHHHHHHHHCCCHHHHHHHHHHCHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHH
LSQLQQAGLIFTERRGQWTYCKANANLINEFIKELKVMI
HHHHHHCCCEEEECCCCEEEEECCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNVINILKALSNEKRLQIIRWLKEPDKHFSSSHCDVSKDGVCVGLIEKKSGLSQSTVSQY
CCHHHHHHHHCCCHHHHHHHHHHCHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHH
LSQLQQAGLIFTERRGQWTYCKANANLINEFIKELKVMI
HHHHHHCCCEEEECCCCEEEEECCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]