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The map label for this gene is 148358352

Identifier: 148358352

GI number: 148358352

Start: 227257

End: 229413

Strand: Direct

Name: 148358352

Synonym: LPC_0215

Alternate gene names: NA

Gene position: 227257-229413 (Clockwise)

Preceding gene: 148358351

Following gene: 148358355

Centisome position: 6.35

GC content: 32.36

Gene sequence:

>2157_bases
ATGATGAACGAAATAAGAAGTGAAAAAGAAATTTTTGAAGATTTAGAAGCATTATGTTGTTCTGATGGATACGTTCATGT
AATAGCCTATTTTTGTTTTAAAGATAATACAATCTTGGCATCTGAAAACGGTCAAATGATATCTTCGAATGAAAATCCTT
CAAATAGATTAATTAGAACTGAAATAGCAACACTGATCGGCCTAATGGTGAAAAAAGAAATAAAGTTACCTATTCCCCCA
CCGGATATTTTTGATACATATATTAATCAAACTCAAGCGTTACTTCATGAGCTACACCAAACAATGTATCCATCAATAGG
ACAATCTACAGAAGAAGTAAGTCTTAAAAAAAGAATGGACTTATTTACGATGGGCACATTCCTAAAGGAAGGAATTTTTT
ATGCAGGAGAATCTGCTTTTCCATTTCAATATAGGGATCTTTCATTAAAAAAATATGAAAAAGATGATTCGTGGTTTATT
GAAAAAAAAGGGTTTTCTTTTGCAGATGCAATTCTAGTTATAACAGCTGTCATTAACTTTCAAAATGAAAAACTTACCCA
AACGTTATCAGAATTAAAAGACAAGGACGTGAATGATTGGTCAGTTTTAGATGGTTATATTTTTTCAGCGAATGATATTA
CCCAAGAATCAAATTTGACTCCGGAGGTGGTTTCTAACGTATTAGATTCTTTTTGTTTGCCTCAAGAGGGATCTAATGAC
AGTTTCAATGAACTGGGGGATTTTAATTTAACCAATGCATATCCTTTAATTTTTCTCAATGATTCCAATTACCTACTATT
ACAGCATTACACACTGCTAGAAGCGCTGTATGAAACGCCTTTTTTCTGGTTAAAAGATGATGAGGCTTATAAAGATGAAG
CCGCAACAAATAGAGGTGCGTTTGTTGAAAACGTGGCGGTAGAATGGTTATCTCGTGTTTTTGGCAAACATAATGTTTTT
AAAAATGTTGAAATTAAGGCATCAAAGAAAGAAAAGTCAGGGGAAATAGATGTACTTGTACTTTATGCTGATAGAGCAAT
TATTTTGCAGGCAAAATCAAAAAAATTAACCTTAGCAGCACGCAAAGGTAATGATAATCTTCTTAAAGACGATTTTAAAA
AGGCTATACAAGATGCCTATGATCAAGGGTTTAGTTGTGCTGAACTATTGAATAACAAACAACATAAATTCTATATTAAT
GGGACAGATGAAATCGAAGTCCCTGATAATCTAAAAAAAATATATATTTTTTGTACGATTTCAGAGCATTATCCAAGCCT
AAGTTATCAATCAAAGCTCTTCCTAAATTTTAAAGAAACCGAGCAAATCGCTGCACCATTTGTTATGGATTTATTCCTTC
TTGATGTAATGGCAGAAATGTTAAATTCTCCATTGTATTTTCTAAGTTATGTCGATCGTAGGTGTAAGAACCTAGAAAAA
TTTGGTGCATCTCATGAGTTATTGATCTTGGATCATCATTTAAAAAGAAACCTATGGCTTGATGGTGATAACACATTTAT
GTATGTTGCTGATCACGATTGCTTAGAACTTTATGAGGCTTTATTAACTAGGCGTGAAAATTATCCTGGAAAAGAAACCC
CAGAAGGCATATTAACAAGATTCAAAAATACTTCCTTTGAAAAACTAATAAAGCAAATTACGCATTTAGAACATCCAGAA
GCGGTTAACCTAGGTTTAATTTTGCTAACGTGTAGCGGTGAGTTTATTAATGGGTTTAATAGTGATATCAATCGCCTTCT
GAAGTTAGTTAAAACTGATGGGAATGGTCATGATATTACTATATTACTTTATAATAATTGTGGACTTACAATACACATTA
ATTTTGATTCCGAGTTTATCGCACAGAAAGTTCTTAAAAGTCATTGTGAGAGGCGAAAGTACATTGCCAAAGCCACTGAT
TGGTATGGTCTTTGTCTAAACCCTGTTAATTTAGATATTCGATTAGCACTAAGTTTAAGCTATGATTGGAAATATTCAGA
GGAAATGGAAAAAACTGTTAAACCATTGATTGCTAATCAGGAAAAGGTAGCTAAATCAGGCAAAAAGAAAAAACGTAAAA
TTGGTCGAAATGAGTTCTGTCCGTGTGAAAGTGGAAAAAAATACAAAAAATGCTGTATTAATAAGAAGTATCTATAA

Upstream 100 bases:

>100_bases
TATCCCTAAATTGAACGAGCTTACTCCCCCTAAAGCTTGAATTTCTAAAAGCTCTGAAAGTAACTTGATTAAAATCAATA
AAAGTAGATCAATAATCCTA

Downstream 100 bases:

>100_bases
AGTATACGAAGTTTGACTATTTGGATTAGTCAATCATCTTGCTGTTTCCATTTTAAATAGAAATCAATTCTGTCATATTC
AGCAAATTTATTTATCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: Nerd Domain Protein; Protein-Export Translocase Protein; SecA-Related Protein; SecA-Like Protein; NERD Domain-Containing Protein

Number of amino acids: Translated: 718; Mature: 718

Protein sequence:

>718_residues
MMNEIRSEKEIFEDLEALCCSDGYVHVIAYFCFKDNTILASENGQMISSNENPSNRLIRTEIATLIGLMVKKEIKLPIPP
PDIFDTYINQTQALLHELHQTMYPSIGQSTEEVSLKKRMDLFTMGTFLKEGIFYAGESAFPFQYRDLSLKKYEKDDSWFI
EKKGFSFADAILVITAVINFQNEKLTQTLSELKDKDVNDWSVLDGYIFSANDITQESNLTPEVVSNVLDSFCLPQEGSND
SFNELGDFNLTNAYPLIFLNDSNYLLLQHYTLLEALYETPFFWLKDDEAYKDEAATNRGAFVENVAVEWLSRVFGKHNVF
KNVEIKASKKEKSGEIDVLVLYADRAIILQAKSKKLTLAARKGNDNLLKDDFKKAIQDAYDQGFSCAELLNNKQHKFYIN
GTDEIEVPDNLKKIYIFCTISEHYPSLSYQSKLFLNFKETEQIAAPFVMDLFLLDVMAEMLNSPLYFLSYVDRRCKNLEK
FGASHELLILDHHLKRNLWLDGDNTFMYVADHDCLELYEALLTRRENYPGKETPEGILTRFKNTSFEKLIKQITHLEHPE
AVNLGLILLTCSGEFINGFNSDINRLLKLVKTDGNGHDITILLYNNCGLTIHINFDSEFIAQKVLKSHCERRKYIAKATD
WYGLCLNPVNLDIRLALSLSYDWKYSEEMEKTVKPLIANQEKVAKSGKKKKRKIGRNEFCPCESGKKYKKCCINKKYL

Sequences:

>Translated_718_residues
MMNEIRSEKEIFEDLEALCCSDGYVHVIAYFCFKDNTILASENGQMISSNENPSNRLIRTEIATLIGLMVKKEIKLPIPP
PDIFDTYINQTQALLHELHQTMYPSIGQSTEEVSLKKRMDLFTMGTFLKEGIFYAGESAFPFQYRDLSLKKYEKDDSWFI
EKKGFSFADAILVITAVINFQNEKLTQTLSELKDKDVNDWSVLDGYIFSANDITQESNLTPEVVSNVLDSFCLPQEGSND
SFNELGDFNLTNAYPLIFLNDSNYLLLQHYTLLEALYETPFFWLKDDEAYKDEAATNRGAFVENVAVEWLSRVFGKHNVF
KNVEIKASKKEKSGEIDVLVLYADRAIILQAKSKKLTLAARKGNDNLLKDDFKKAIQDAYDQGFSCAELLNNKQHKFYIN
GTDEIEVPDNLKKIYIFCTISEHYPSLSYQSKLFLNFKETEQIAAPFVMDLFLLDVMAEMLNSPLYFLSYVDRRCKNLEK
FGASHELLILDHHLKRNLWLDGDNTFMYVADHDCLELYEALLTRRENYPGKETPEGILTRFKNTSFEKLIKQITHLEHPE
AVNLGLILLTCSGEFINGFNSDINRLLKLVKTDGNGHDITILLYNNCGLTIHINFDSEFIAQKVLKSHCERRKYIAKATD
WYGLCLNPVNLDIRLALSLSYDWKYSEEMEKTVKPLIANQEKVAKSGKKKKRKIGRNEFCPCESGKKYKKCCINKKYL
>Mature_718_residues
MMNEIRSEKEIFEDLEALCCSDGYVHVIAYFCFKDNTILASENGQMISSNENPSNRLIRTEIATLIGLMVKKEIKLPIPP
PDIFDTYINQTQALLHELHQTMYPSIGQSTEEVSLKKRMDLFTMGTFLKEGIFYAGESAFPFQYRDLSLKKYEKDDSWFI
EKKGFSFADAILVITAVINFQNEKLTQTLSELKDKDVNDWSVLDGYIFSANDITQESNLTPEVVSNVLDSFCLPQEGSND
SFNELGDFNLTNAYPLIFLNDSNYLLLQHYTLLEALYETPFFWLKDDEAYKDEAATNRGAFVENVAVEWLSRVFGKHNVF
KNVEIKASKKEKSGEIDVLVLYADRAIILQAKSKKLTLAARKGNDNLLKDDFKKAIQDAYDQGFSCAELLNNKQHKFYIN
GTDEIEVPDNLKKIYIFCTISEHYPSLSYQSKLFLNFKETEQIAAPFVMDLFLLDVMAEMLNSPLYFLSYVDRRCKNLEK
FGASHELLILDHHLKRNLWLDGDNTFMYVADHDCLELYEALLTRRENYPGKETPEGILTRFKNTSFEKLIKQITHLEHPE
AVNLGLILLTCSGEFINGFNSDINRLLKLVKTDGNGHDITILLYNNCGLTIHINFDSEFIAQKVLKSHCERRKYIAKATD
WYGLCLNPVNLDIRLALSLSYDWKYSEEMEKTVKPLIANQEKVAKSGKKKKRKIGRNEFCPCESGKKYKKCCINKKYL

Specific function: Unknown

COG id: COG0653

COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82664; Mature: 82664

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNEIRSEKEIFEDLEALCCSDGYVHVIAYFCFKDNTILASENGQMISSNENPSNRLIRT
CCCHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCEEEECCCCCEEECCCCCCHHHHHH
EIATLIGLMVKKEIKLPIPPPDIFDTYINQTQALLHELHQTMYPSIGQSTEEVSLKKRMD
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LFTMGTFLKEGIFYAGESAFPFQYRDLSLKKYEKDDSWFIEKKGFSFADAILVITAVINF
HHHHHHHHHCCCEECCCCCCCEEECCCCHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHC
QNEKLTQTLSELKDKDVNDWSVLDGYIFSANDITQESNLTPEVVSNVLDSFCLPQEGSND
CCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
SFNELGDFNLTNAYPLIFLNDSNYLLLQHYTLLEALYETPFFWLKDDEAYKDEAATNRGA
CHHHCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHCCEEEEECCHHHHHHCCCCCCC
FVENVAVEWLSRVFGKHNVFKNVEIKASKKEKSGEIDVLVLYADRAIILQAKSKKLTLAA
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEEECCEEEEEECCCEEEEEE
RKGNDNLLKDDFKKAIQDAYDQGFSCAELLNNKQHKFYINGTDEIEVPDNLKKIYIFCTI
ECCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEEEE
SEHYPSLSYQSKLFLNFKETEQIAAPFVMDLFLLDVMAEMLNSPLYFLSYVDRRCKNLEK
CCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FGASHELLILDHHLKRNLWLDGDNTFMYVADHDCLELYEALLTRRENYPGKETPEGILTR
HCCCCEEEEEECHHCCCEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
FKNTSFEKLIKQITHLEHPEAVNLGLILLTCSGEFINGFNSDINRLLKLVKTDGNGHDIT
HCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHCCCHHHHHHHHHHHHCCCCCCEEE
ILLYNNCGLTIHINFDSEFIAQKVLKSHCERRKYIAKATDWYGLCLNPVNLDIRLALSLS
EEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEE
YDWKYSEEMEKTVKPLIANQEKVAKSGKKKKRKIGRNEFCPCESGKKYKKCCINKKYL
ECCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCC
>Mature Secondary Structure
MMNEIRSEKEIFEDLEALCCSDGYVHVIAYFCFKDNTILASENGQMISSNENPSNRLIRT
CCCHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCEEEECCCCCEEECCCCCCHHHHHH
EIATLIGLMVKKEIKLPIPPPDIFDTYINQTQALLHELHQTMYPSIGQSTEEVSLKKRMD
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LFTMGTFLKEGIFYAGESAFPFQYRDLSLKKYEKDDSWFIEKKGFSFADAILVITAVINF
HHHHHHHHHCCCEECCCCCCCEEECCCCHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHC
QNEKLTQTLSELKDKDVNDWSVLDGYIFSANDITQESNLTPEVVSNVLDSFCLPQEGSND
CCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
SFNELGDFNLTNAYPLIFLNDSNYLLLQHYTLLEALYETPFFWLKDDEAYKDEAATNRGA
CHHHCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHCCEEEEECCHHHHHHCCCCCCC
FVENVAVEWLSRVFGKHNVFKNVEIKASKKEKSGEIDVLVLYADRAIILQAKSKKLTLAA
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEEECCEEEEEECCCEEEEEE
RKGNDNLLKDDFKKAIQDAYDQGFSCAELLNNKQHKFYINGTDEIEVPDNLKKIYIFCTI
ECCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEEEE
SEHYPSLSYQSKLFLNFKETEQIAAPFVMDLFLLDVMAEMLNSPLYFLSYVDRRCKNLEK
CCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FGASHELLILDHHLKRNLWLDGDNTFMYVADHDCLELYEALLTRRENYPGKETPEGILTR
HCCCCEEEEEECHHCCCEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
FKNTSFEKLIKQITHLEHPEAVNLGLILLTCSGEFINGFNSDINRLLKLVKTDGNGHDIT
HCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHCCCHHHHHHHHHHHHCCCCCCEEE
ILLYNNCGLTIHINFDSEFIAQKVLKSHCERRKYIAKATDWYGLCLNPVNLDIRLALSLS
EEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEE
YDWKYSEEMEKTVKPLIANQEKVAKSGKKKKRKIGRNEFCPCESGKKYKKCCINKKYL
ECCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA