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The map label for this gene is alpA [C]

Identifier: 148358345

GI number: 148358345

Start: 222604

End: 222804

Strand: Direct

Name: alpA [C]

Synonym: LPC_0208

Alternate gene names: 148358345

Gene position: 222604-222804 (Clockwise)

Preceding gene: 148358344

Following gene: 148358346

Centisome position: 6.22

GC content: 41.29

Gene sequence:

>201_bases
ATGGCTTATAAAATTTTGAAATTACCGGAGGTTAAAGAGCGAACCGCTATATCAAGAAGTAGAATTTATAATCTAATTTC
AGAAGGTCTTTTCCCCAAACCCATTCTTCTCGGAGGAGCCCGAGCAGTCGGCTGGATTGAATCCGAAATCAACGAATGGA
TCGAGCAGCAAATAGATGCTAGCCGAAACCAAAAATGCTGA

Upstream 100 bases:

>100_bases
ATTTTTGTAAAAAATTATTTGAAAATAAATGATGTGTCAAATTTACACTTAATTTAACTTTAAGCCATACCCGTCCTTCA
ACAACTTAGGAGAATTAAAT

Downstream 100 bases:

>100_bases
CAGGGAGGAAAGACAATGTCTCAGCTCAGAGAAGGTCGCATTGGCTGGAACCAAGCGACCTTGATACTAATTAAATTACA
GCTTGAGTTTATCGCAATAT

Product: prophage CP4-57 regulatory protein AlpA

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MAYKILKLPEVKERTAISRSRIYNLISEGLFPKPILLGGARAVGWIESEINEWIEQQIDASRNQKC

Sequences:

>Translated_66_residues
MAYKILKLPEVKERTAISRSRIYNLISEGLFPKPILLGGARAVGWIESEINEWIEQQIDASRNQKC
>Mature_65_residues
AYKILKLPEVKERTAISRSRIYNLISEGLFPKPILLGGARAVGWIESEINEWIEQQIDASRNQKC

Specific function: Positive Regulator Of The Expression Of The Slpa Gene. [C]

COG id: COG3311

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7573; Mature: 7442

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYKILKLPEVKERTAISRSRIYNLISEGLFPKPILLGGARAVGWIESEINEWIEQQIDA
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SRNQKC
CCCCCC
>Mature Secondary Structure 
AYKILKLPEVKERTAISRSRIYNLISEGLFPKPILLGGARAVGWIESEINEWIEQQIDA
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SRNQKC
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA