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The map label for this gene is trbL [H]

Identifier: 148358318

GI number: 148358318

Start: 194211

End: 195683

Strand: Direct

Name: trbL [H]

Synonym: LPC_0180

Alternate gene names: 148358318

Gene position: 194211-195683 (Clockwise)

Preceding gene: 148358317

Following gene: 148358319

Centisome position: 5.43

GC content: 45.89

Gene sequence:

>1473_bases
ATGCCTGTTTTAAACGAGGCAGTTATTCAAAAAGCTCAGGCCATAAATGGTAATCTTATGAAAAAAAAGACAATTACTTA
TTTAGCTGTATTCTTGTTAATCGGTTTTTCAGTAAATTGTCATGCACATAATAGCAGCATAGACAGCCGAGATTTGCTGG
ATAATATTTTGTACCGTTTTTCTGCTACCGCTTCGATGTGGAGTCAAACAATCCTAAGCTATGCTCGTTATCTTTTTTGG
TCTTTAGCCACAATCAGCATGGTATGGACTTATGGCTTAATGGCGCTTCGTAAAGCCGATATACAAGAATTTATGGCGGA
AACCGTGCGGTTTTTAGTGGTTGTCGGTTTTTTCTACTGGCTTTTAGACAATGGACCTGCCATTGCTACGGCCATCATGG
ACTCCATGCGGAAGCTCGCGGCCAATGCCGCTGGAATTGATGCACATATATCTCCATCCGATATCGTCGATGTGGGCTTT
GATATTGTTTCAAAAGCGATTGATAACTCATCCATCTGGTCTCCTGCTGCAACAACGGTTGGCTTGATTGTCGCAGGCGT
TATCTTAGTTGTTCTGGCGTTGGTCAGCATCAATATGCTCATCATCTTAATCACCGCCTGGATATTAACCTATGCCGGCG
TCATTTTATTAGGCTTTGGTGGTGGTCGCTGGACTCAAGATATCGCCATTCAATATTACAAAACGATGCTTGGGACGGCT
CTTCAGGCATTTTCGATGATTTTGATTATCGGCATCGGCAAGTCCTTTGTGGATCAATACTATGCAGCCATGTCAAATGA
CATTCTTCTTAAGGAAATGTTCATTATGCTGGTTGTCGCAATTCTTTTGCTGGTTCTTATCAATAAAATCCCACCTGTTT
TATCTGGCATTGTATCGGGCGGGGGTCCAAGCGGCGGTGGCAATGGGATTGGGTTAGGCGGCGCTTTAGGTGCAGCAGGT
ATTGCAGGGACTGCATTAGCAGGCGCTGCGGGTGCCGCGAGCGCTCACAGTGCAGGCGGTCTTTCAGCATTGCATGCCGC
GTTCAAAGCAGCTTCTCAAAGTGTTGGAGCGGGTGATAGCGGCTCTTTTTCTGGTGGCAATTCGGGTTCAAAGCTTGGAG
GGTTGGCTCAAGCCATGGGACAGGCTTCCAAGTTTGCCGGTTCATTTAGTTCGCATCTGGCTTCTGGGGCGTTTGATGTC
GCAAGCGAAAAACTAGGTAGTATGAAAGACTCATTTTCTGCAAAAACCGCTGAAACGACAGGAGGAAAAATTGCAGATGC
CATTCAACAACGCGCCTCATCCAATGCTCATTCAGTAACCAGCAATAAGACCCCCGCTACTGATAACGTGACCTCAATGG
GGGCACCTGAAGGCAGTTTCAGTTCGGGAAGTGGCGAATATAATCAAGAATCAGGCGGTGCAGATGAAGTCAGTCAGTTT
GTCAATCAAAAAGCATCTGGAGAAAGCCTGTGA

Upstream 100 bases:

>100_bases
CCTGAAACCAAAGCAAGGAAAAAAGCAGCGCATCTTGCCTCATTAACCTGTGATAGCTCCAAAAAAGGTCGGACCAAAGA
AGAATTGCAGGCAATTGCCG

Downstream 100 bases:

>100_bases
GCATGAGCAAACCCAATAAATCCATTGGCCCACAGGTAAGAAAAAAGCGCGTTGAAAAGACGAATAAACAAATCGTTTTT
TTAGTTGTGCTCGCGCTTTT

Product: putative conjugal transfer protein TrbL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 489

Protein sequence:

>490_residues
MPVLNEAVIQKAQAINGNLMKKKTITYLAVFLLIGFSVNCHAHNSSIDSRDLLDNILYRFSATASMWSQTILSYARYLFW
SLATISMVWTYGLMALRKADIQEFMAETVRFLVVVGFFYWLLDNGPAIATAIMDSMRKLAANAAGIDAHISPSDIVDVGF
DIVSKAIDNSSIWSPAATTVGLIVAGVILVVLALVSINMLIILITAWILTYAGVILLGFGGGRWTQDIAIQYYKTMLGTA
LQAFSMILIIGIGKSFVDQYYAAMSNDILLKEMFIMLVVAILLLVLINKIPPVLSGIVSGGGPSGGGNGIGLGGALGAAG
IAGTALAGAAGAASAHSAGGLSALHAAFKAASQSVGAGDSGSFSGGNSGSKLGGLAQAMGQASKFAGSFSSHLASGAFDV
ASEKLGSMKDSFSAKTAETTGGKIADAIQQRASSNAHSVTSNKTPATDNVTSMGAPEGSFSSGSGEYNQESGGADEVSQF
VNQKASGESL

Sequences:

>Translated_490_residues
MPVLNEAVIQKAQAINGNLMKKKTITYLAVFLLIGFSVNCHAHNSSIDSRDLLDNILYRFSATASMWSQTILSYARYLFW
SLATISMVWTYGLMALRKADIQEFMAETVRFLVVVGFFYWLLDNGPAIATAIMDSMRKLAANAAGIDAHISPSDIVDVGF
DIVSKAIDNSSIWSPAATTVGLIVAGVILVVLALVSINMLIILITAWILTYAGVILLGFGGGRWTQDIAIQYYKTMLGTA
LQAFSMILIIGIGKSFVDQYYAAMSNDILLKEMFIMLVVAILLLVLINKIPPVLSGIVSGGGPSGGGNGIGLGGALGAAG
IAGTALAGAAGAASAHSAGGLSALHAAFKAASQSVGAGDSGSFSGGNSGSKLGGLAQAMGQASKFAGSFSSHLASGAFDV
ASEKLGSMKDSFSAKTAETTGGKIADAIQQRASSNAHSVTSNKTPATDNVTSMGAPEGSFSSGSGEYNQESGGADEVSQF
VNQKASGESL
>Mature_489_residues
PVLNEAVIQKAQAINGNLMKKKTITYLAVFLLIGFSVNCHAHNSSIDSRDLLDNILYRFSATASMWSQTILSYARYLFWS
LATISMVWTYGLMALRKADIQEFMAETVRFLVVVGFFYWLLDNGPAIATAIMDSMRKLAANAAGIDAHISPSDIVDVGFD
IVSKAIDNSSIWSPAATTVGLIVAGVILVVLALVSINMLIILITAWILTYAGVILLGFGGGRWTQDIAIQYYKTMLGTAL
QAFSMILIIGIGKSFVDQYYAAMSNDILLKEMFIMLVVAILLLVLINKIPPVLSGIVSGGGPSGGGNGIGLGGALGAAGI
AGTALAGAAGAASAHSAGGLSALHAAFKAASQSVGAGDSGSFSGGNSGSKLGGLAQAMGQASKFAGSFSSHLASGAFDVA
SEKLGSMKDSFSAKTAETTGGKIADAIQQRASSNAHSVTSNKTPATDNVTSMGAPEGSFSSGSGEYNQESGGADEVSQFV
NQKASGESL

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbL/virB6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014150
- InterPro:   IPR007688 [H]

Pfam domain/function: PF04610 TrbL [H]

EC number: NA

Molecular weight: Translated: 50553; Mature: 50421

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVLNEAVIQKAQAINGNLMKKKTITYLAVFLLIGFSVNCHAHNSSIDSRDLLDNILYRF
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHH
SATASMWSQTILSYARYLFWSLATISMVWTYGLMALRKADIQEFMAETVRFLVVVGFFYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDNGPAIATAIMDSMRKLAANAAGIDAHISPSDIVDVGFDIVSKAIDNSSIWSPAATTV
HHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
GLIVAGVILVVLALVSINMLIILITAWILTYAGVILLGFGGGRWTQDIAIQYYKTMLGTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
LQAFSMILIIGIGKSFVDQYYAAMSNDILLKEMFIMLVVAILLLVLINKIPPVLSGIVSG
HHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
GGPSGGGNGIGLGGALGAAGIAGTALAGAAGAASAHSAGGLSALHAAFKAASQSVGAGDS
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
GSFSGGNSGSKLGGLAQAMGQASKFAGSFSSHLASGAFDVASEKLGSMKDSFSAKTAETT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GGKIADAIQQRASSNAHSVTSNKTPATDNVTSMGAPEGSFSSGSGEYNQESGGADEVSQF
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
VNQKASGESL
HHCCCCCCCC
>Mature Secondary Structure 
PVLNEAVIQKAQAINGNLMKKKTITYLAVFLLIGFSVNCHAHNSSIDSRDLLDNILYRF
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHH
SATASMWSQTILSYARYLFWSLATISMVWTYGLMALRKADIQEFMAETVRFLVVVGFFYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDNGPAIATAIMDSMRKLAANAAGIDAHISPSDIVDVGFDIVSKAIDNSSIWSPAATTV
HHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
GLIVAGVILVVLALVSINMLIILITAWILTYAGVILLGFGGGRWTQDIAIQYYKTMLGTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
LQAFSMILIIGIGKSFVDQYYAAMSNDILLKEMFIMLVVAILLLVLINKIPPVLSGIVSG
HHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
GGPSGGGNGIGLGGALGAAGIAGTALAGAAGAASAHSAGGLSALHAAFKAASQSVGAGDS
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
GSFSGGNSGSKLGGLAQAMGQASKFAGSFSSHLASGAFDVASEKLGSMKDSFSAKTAETT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GGKIADAIQQRASSNAHSVTSNKTPATDNVTSMGAPEGSFSSGSGEYNQESGGADEVSQF
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
VNQKASGESL
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]