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The map label for this gene is 148358279

Identifier: 148358279

GI number: 148358279

Start: 146795

End: 148534

Strand: Direct

Name: 148358279

Synonym: LPC_0141

Alternate gene names: NA

Gene position: 146795-148534 (Clockwise)

Preceding gene: 148358277

Following gene: 148358280

Centisome position: 4.1

GC content: 41.21

Gene sequence:

>1740_bases
GTGGGCAATAGTCGGTTTTATTTTGCTAATCCTGATAAATTCAGTCGATTTATTAATCGATGGGATTTGCTATTGCTTAT
ATTGACTTTTTCTGTGTTATTTTTCCTGGGTTGGGCCGGTTCACAGATGGCTACCCCGTATCAATTAGGGGATCAAATTC
CCATTTCCTTGGAACCCTCCAACCTTCCCTTTTATGCGTTACGAACAGTTTTACGCATGTTTATCGCATTGATTTTTTCA
ATTCTGTTTACTTTTATTGTAGGTGCTTTAGCTGCCAAAAATCGCAGGGCTGAGCAAATTGTTATACCGGCGATTGATAT
TTTACAATCGATTCCTGTTCTGAGTTTTTTATCTATTACTGTCACCGGGTTTATTCATTTATTTCCCAATAGCTTGTTAG
GTCCAGAATGCGCGTCAATTTTTGCTATTTTTAGCGCCCAAGTGTGGAATATGACTTTTGGATTTTATCAATCTTTAAAA
ACTGTTCCTCATGATTTGATTGAAGTCTCTGCTATGCTCAGGTTGTCAGCCTGGCAGCGCTTTTGGAAGGTAGAAGTTCC
TTTTTCCATGTCTGGACTGTTATGGAATATGATGGTTTCAATGTCGGCAAGCTGGTTTTTTGTGGTTTTGTCAGAAGCTA
TTTCGGTGGCGCACCAAAATATTAGATTACCCGGTGTAGGTTCTTATATCGCATTGGCGATAGCCCAGAGGGATTTGCAT
GCTGTGGGATATGCCATTCTGACCATGGTTATCGTTATTTTTTTGTATGATCAAATACTTTTCAGGCCACTTATTGCCTG
GTCTGAAAAATTTAAAATGGAACAGTCTCCCGATGAGTCAGAATATCAATCCTGGTTAATTGACTTGATACGCAGTAGTC
GTTTGATGAAGAGAGTGACGGAGTGGCTCGCGGTCTTTACCAATAGTTTTGTAAATGCTCGTTGGTTGAGGATTGGTGAG
GTTAAGGCTGTTAAGGAAATTGATTTTAAAAGGCAAAAGCGTTTGGACCGATTGTGGACAGCGTTGGTTTTGATAGCCGT
TATTACTGGCGGGTGGTTTTTGTTGAAATTTATTCTCGCTGAATTGAAGGTGAGTGATATATTTCATGTCTTTTTATTGG
GCGCAGCAACAGGAGCTCGGGTCATTATATTAATTTTGCTAAGCTCCATGCTATGGATTCCCGTTGGCGTGTGGATAGGA
TTAAGGCCAAGGCTGGCTCAAAAAATACAACCGATTATTCAATTTGTGGCAGCGTTTCCAGCGAACCTGTTTTATCCTTT
ATTTGTAATTGCTATCGTCAAATTTAATTTGAGCGTGGAAATCTGGGTAACTCCGCTCATGATCCTGGGCACACAGTGGT
ATATTTTATTTAATGTGATCGCAGGAGCCTCGAGTATACCCCGCGATCTTTATCTGGCGGCTGATAATTTTGGGTTAAAG
GGTTGGATATGGTGGAAAAGATTGGCTTTGCCAGGTATTTTTCCTTTTTACATTACCGGAGCTATTACAGCAGCAGGCGG
TGCATGGAATGCCAGTATCGTCGCTGAATACGTGAGCTGGGGAAATATTACTCTTAAGGCCACAGGTCTGGGGGAGTATA
TTCAGGCTAGTACGACAGCGGGAGACTTCCCGCAAATTGCGTTAGGAACAGCAATGATGTGTGTCTATGTATTAGCTTTC
AACCATCTTATTTGGCGCCCGCTTTATCGCTTAGCCGAAGAACGATTTAATTTTAATTGA

Upstream 100 bases:

>100_bases
GGGTTTTTCGTAAATCCTGATTCAGGAATGGATAAATATTTTTTAGATTTAAGGATTAGATTAAGGGAAACTTGTAACGT
CAATTTTAAGAGAGGGTATA

Downstream 100 bases:

>100_bases
GACTCCTATGCCGGAAACAATTATTAACATAGAAAATTTAAGCAAATCTTTTAAAAAAGCACCTTCTCAGCACCTTCTTG
TACTTGAAGATGTTAATTTC

Product: ABC transporter permease

Products: NA

Alternate protein names: ABC Transporter Permease; ABC Transporter Membrane Protein; ABC Transporter Nitrate Permease; ABC Transporter; ABC Anion Transporter; ABC-Type Anion Transport System Permease Component; ABC Transport System Permease Protein; Transmembrane ABC Transporter Protein; Anion Transporter Permease Protein; Nitrate Transport System Permease Protein; Nitrate ABC Transporter Permease Protein; Anion ABC Transporter Permease; Taurine ABC Transporter Permease Protein; Nitrate ABC Transporter Permease; Sugar ABC Transporter; ABC Transporter Inner Membrane Subunit; Sugar ABC Transporter 1 Permease Protein; ABC Transporter Transmembrane Permease Protein; Sulfonate Transport Permease Protein; Nitrate Transport System Permease; ABC-Type Anion Transport System; ABC-Type Nitrate Transport Permease

Number of amino acids: Translated: 579; Mature: 578

Protein sequence:

>579_residues
MGNSRFYFANPDKFSRFINRWDLLLLILTFSVLFFLGWAGSQMATPYQLGDQIPISLEPSNLPFYALRTVLRMFIALIFS
ILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSFLSITVTGFIHLFPNSLLGPECASIFAIFSAQVWNMTFGFYQSLK
TVPHDLIEVSAMLRLSAWQRFWKVEVPFSMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLH
AVGYAILTMVIVIFLYDQILFRPLIAWSEKFKMEQSPDESEYQSWLIDLIRSSRLMKRVTEWLAVFTNSFVNARWLRIGE
VKAVKEIDFKRQKRLDRLWTALVLIAVITGGWFLLKFILAELKVSDIFHVFLLGAATGARVIILILLSSMLWIPVGVWIG
LRPRLAQKIQPIIQFVAAFPANLFYPLFVIAIVKFNLSVEIWVTPLMILGTQWYILFNVIAGASSIPRDLYLAADNFGLK
GWIWWKRLALPGIFPFYITGAITAAGGAWNASIVAEYVSWGNITLKATGLGEYIQASTTAGDFPQIALGTAMMCVYVLAF
NHLIWRPLYRLAEERFNFN

Sequences:

>Translated_579_residues
MGNSRFYFANPDKFSRFINRWDLLLLILTFSVLFFLGWAGSQMATPYQLGDQIPISLEPSNLPFYALRTVLRMFIALIFS
ILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSFLSITVTGFIHLFPNSLLGPECASIFAIFSAQVWNMTFGFYQSLK
TVPHDLIEVSAMLRLSAWQRFWKVEVPFSMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLH
AVGYAILTMVIVIFLYDQILFRPLIAWSEKFKMEQSPDESEYQSWLIDLIRSSRLMKRVTEWLAVFTNSFVNARWLRIGE
VKAVKEIDFKRQKRLDRLWTALVLIAVITGGWFLLKFILAELKVSDIFHVFLLGAATGARVIILILLSSMLWIPVGVWIG
LRPRLAQKIQPIIQFVAAFPANLFYPLFVIAIVKFNLSVEIWVTPLMILGTQWYILFNVIAGASSIPRDLYLAADNFGLK
GWIWWKRLALPGIFPFYITGAITAAGGAWNASIVAEYVSWGNITLKATGLGEYIQASTTAGDFPQIALGTAMMCVYVLAF
NHLIWRPLYRLAEERFNFN
>Mature_578_residues
GNSRFYFANPDKFSRFINRWDLLLLILTFSVLFFLGWAGSQMATPYQLGDQIPISLEPSNLPFYALRTVLRMFIALIFSI
LFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSFLSITVTGFIHLFPNSLLGPECASIFAIFSAQVWNMTFGFYQSLKT
VPHDLIEVSAMLRLSAWQRFWKVEVPFSMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLHA
VGYAILTMVIVIFLYDQILFRPLIAWSEKFKMEQSPDESEYQSWLIDLIRSSRLMKRVTEWLAVFTNSFVNARWLRIGEV
KAVKEIDFKRQKRLDRLWTALVLIAVITGGWFLLKFILAELKVSDIFHVFLLGAATGARVIILILLSSMLWIPVGVWIGL
RPRLAQKIQPIIQFVAAFPANLFYPLFVIAIVKFNLSVEIWVTPLMILGTQWYILFNVIAGASSIPRDLYLAADNFGLKG
WIWWKRLALPGIFPFYITGAITAAGGAWNASIVAEYVSWGNITLKATGLGEYIQASTTAGDFPQIALGTAMMCVYVLAFN
HLIWRPLYRLAEERFNFN

Specific function: Unknown

COG id: COG4986

COG function: function code P; ABC-type anion transport system, duplicated permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65673; Mature: 65541

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNSRFYFANPDKFSRFINRWDLLLLILTFSVLFFLGWAGSQMATPYQLGDQIPISLEPS
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCEEECCC
NLPFYALRTVLRMFIALIFSILFTFIVGALAAKNRRAEQIVIPAIDILQSIPVLSFLSIT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCHHHHHHHHH
VTGFIHLFPNSLLGPECASIFAIFSAQVWNMTFGFYQSLKTVPHDLIEVSAMLRLSAWQR
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWKVEVPFSMSGLLWNMMVSMSASWFFVVLSEAISVAHQNIRLPGVGSYIALAIAQRDLH
HEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AVGYAILTMVIVIFLYDQILFRPLIAWSEKFKMEQSPDESEYQSWLIDLIRSSRLMKRVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EWLAVFTNSFVNARWLRIGEVKAVKEIDFKRQKRLDRLWTALVLIAVITGGWFLLKFILA
HHHHHHHHHHCCHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
ELKVSDIFHVFLLGAATGARVIILILLSSMLWIPVGVWIGLRPRLAQKIQPIIQFVAAFP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
ANLFYPLFVIAIVKFNLSVEIWVTPLMILGTQWYILFNVIAGASSIPRDLYLAADNFGLK
HHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCCC
GWIWWKRLALPGIFPFYITGAITAAGGAWNASIVAEYVSWGNITLKATGLGEYIQASTTA
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHCCCCC
GDFPQIALGTAMMCVYVLAFNHLIWRPLYRLAEERFNFN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GNSRFYFANPDKFSRFINRWDLLLLILTFSVLFFLGWAGSQMATPYQLGDQIPISLEPS
CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCEEECCC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CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA